RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 Q499Y3 187 aa14.19□□□□□ -0.14
NCKIPSD-209ENST00000470006 TMPRSS11AQ6ZMR5 421 aa14.19□□□□□ -0.14
NCKIPSD-209ENST00000470006 SVOPQ8N4V2 548 aa14.19□□□□□ -0.14
NCKIPSD-209ENST00000470006 PHLDA1Q8WV24 401 aaPredicted RBP14.19□□□□□ -0.14
NCKIPSD-209ENST00000470006 AGMATQ9BSE5 352 aa14.19□□□□□ -0.14
NCKIPSD-209ENST00000470006 OR1A1Q9P1Q5 309 aa14.19□□□□□ -0.14
NCKIPSD-209ENST00000470006 RPL36Q9Y3U8 105 aaKnown RBP14.19□□□□□ -0.14
NCKIPSD-209ENST00000470006 PPP5D1E7EU14 171 aa14.18□□□□□ -0.14
NCKIPSD-209ENST00000470006 ITGB1BP1O14713 200 aa14.18□□□□□ -0.14
NCKIPSD-209ENST00000470006 OR9G9P0C7N8 305 aa14.18□□□□□ -0.14
NCKIPSD-209ENST00000470006 ZBTB25P24278 435 aa14.18□□□□□ -0.14
NCKIPSD-209ENST00000470006 ANKRD55Q3KP44 614 aa14.18□□□□□ -0.14
NCKIPSD-209ENST00000470006 OR2G6Q5TZ20 316 aa14.18□□□□□ -0.14
NCKIPSD-209ENST00000470006 ZNF57Q68EA5 555 aaPredicted RBP14.18□□□□□ -0.14
NCKIPSD-209ENST00000470006 C6orf201Q7Z4U5 140 aa14.18□□□□□ -0.14
NCKIPSD-209ENST00000470006 TMEM217Q8N7C4 229 aa14.18□□□□□ -0.14
NCKIPSD-209ENST00000470006 SMIM19Q96E16 107 aa14.18□□□□□ -0.14
NCKIPSD-209ENST00000470006 ZNF230Q9UIE0 474 aaPredicted RBP14.18□□□□□ -0.14
NCKIPSD-209ENST00000470006 TRBV5-5A0A0J9YX44 114 aa14.17□□□□□ -0.14
NCKIPSD-209ENST00000470006 FAM223BA6NKX1 122 aa14.17□□□□□ -0.14
NCKIPSD-209ENST00000470006 M0R1X1 148 aa14.17□□□□□ -0.14
NCKIPSD-209ENST00000470006 SCAF4O95104 1147 aaKnown RBP14.17□□□□□ -0.14
NCKIPSD-209ENST00000470006 HLA-AP01891 365 aaKnown RBP14.17□□□□□ -0.14
NCKIPSD-209ENST00000470006 CBX3Q13185 183 aa14.17□□□□□ -0.14
NCKIPSD-209ENST00000470006 DEFB135Q30KP9 77 aa14.17□□□□□ -0.14
NCKIPSD-209ENST00000470006 WFDC3Q8IUB2 231 aa14.17□□□□□ -0.14
NCKIPSD-209ENST00000470006 FAM223AQ8IWN6 122 aa14.17□□□□□ -0.14
NCKIPSD-209ENST00000470006 ADAD2Q8NCV1 583 aaKnown RBP14.17□□□□□ -0.14
NCKIPSD-209ENST00000470006 CACNG8Q8WXS5 425 aa14.17□□□□□ -0.14
NCKIPSD-209ENST00000470006 SLC7A6OSQ96CW6 309 aaPredicted RBP14.17□□□□□ -0.14
NCKIPSD-209ENST00000470006 HARBI1Q96MB7 349 aa14.17□□□□□ -0.14
NCKIPSD-209ENST00000470006 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.16□□□□□ -0.14
NCKIPSD-209ENST00000470006 SHOXO15266 292 aa14.16□□□□□ -0.14
NCKIPSD-209ENST00000470006 PROP1O75360 226 aa14.16□□□□□ -0.14
NCKIPSD-209ENST00000470006 OR2C1O95371 312 aa14.16□□□□□ -0.14
NCKIPSD-209ENST00000470006 IGLV2-23P01705 113 aa14.16□□□□□ -0.14
NCKIPSD-209ENST00000470006 ALPLP05186 524 aa14.16□□□□□ -0.14
NCKIPSD-209ENST00000470006 GABRB1P18505 474 aa14.16□□□□□ -0.14
NCKIPSD-209ENST00000470006 ETV1P50549 477 aa14.16□□□□□ -0.14
NCKIPSD-209ENST00000470006 APOC4P55056 127 aa14.16□□□□□ -0.14
NCKIPSD-209ENST00000470006 TNXAQ16473 311 aa14.16□□□□□ -0.14
NCKIPSD-209ENST00000470006 TM4SF20Q53R12 229 aa14.16□□□□□ -0.14
NCKIPSD-209ENST00000470006 C1orf146Q5VVC0 180 aa14.16□□□□□ -0.14
NCKIPSD-209ENST00000470006 CDH26Q8IXH8 852 aa14.16□□□□□ -0.14
NCKIPSD-209ENST00000470006 TMEM61Q8N0U2 210 aa14.16□□□□□ -0.14
NCKIPSD-209ENST00000470006 KCNG3Q8TAE7 436 aa14.16□□□□□ -0.14
NCKIPSD-209ENST00000470006 BABAM2Q9NXR7 383 aa14.16□□□□□ -0.14
NCKIPSD-209ENST00000470006 TP53TG1Q9Y2A0 90 aa14.16□□□□□ -0.14
NCKIPSD-209ENST00000470006 ZNF320A2RRD8 509 aa14.15□□□□□ -0.14
NCKIPSD-209ENST00000470006 DYNC1I1O14576 645 aa14.15□□□□□ -0.14
NCKIPSD-209ENST00000470006 EI24O14681 340 aa14.15□□□□□ -0.14
NCKIPSD-209ENST00000470006 OGG1O15527 345 aa14.15□□□□□ -0.14
NCKIPSD-209ENST00000470006 GGCTO75223 188 aaKnown RBP14.15□□□□□ -0.14
NCKIPSD-209ENST00000470006 CRYGBP07316 175 aa14.15□□□□□ -0.14
NCKIPSD-209ENST00000470006 CBLN1P23435 193 aa14.15□□□□□ -0.14
NCKIPSD-209ENST00000470006 YIF1BQ5BJH7 314 aa14.15□□□□□ -0.14
NCKIPSD-209ENST00000470006 MOB1BQ7L9L4 216 aa14.15□□□□□ -0.14
NCKIPSD-209ENST00000470006 ZFP41Q8N8Y5 198 aa14.15□□□□□ -0.14
NCKIPSD-209ENST00000470006 ACOT12Q8WYK0 555 aa14.15□□□□□ -0.14
NCKIPSD-209ENST00000470006 EXOSC1Q9Y3B2 195 aaKnown RBP14.15□□□□□ -0.14
NCKIPSD-209ENST00000470006 ATP8B1O43520 1251 aa14.14□□□□□ -0.15
NCKIPSD-209ENST00000470006 OR10K2Q6IF99 312 aa14.14□□□□□ -0.15
NCKIPSD-209ENST00000470006 Q6ZWC4 215 aa14.14□□□□□ -0.15
NCKIPSD-209ENST00000470006 RHOXF1Q8NHV9 184 aa14.14□□□□□ -0.15
NCKIPSD-209ENST00000470006 NAPSAO96009 420 aa14.13□□□□□ -0.15
NCKIPSD-209ENST00000470006 C15orf32Q32M92 178 aa14.13□□□□□ -0.15
NCKIPSD-209ENST00000470006 ZNF880Q6PDB4 577 aa14.13□□□□□ -0.15
NCKIPSD-209ENST00000470006 SRSF12Q8WXF0 261 aaKnown RBP14.13□□□□□ -0.15
NCKIPSD-209ENST00000470006 FGF20Q9NP95 211 aaPredicted RBP14.13□□□□□ -0.15
NCKIPSD-209ENST00000470006 MRPS18AQ9NVS2 196 aaKnown RBP14.13□□□□□ -0.15
NCKIPSD-209ENST00000470006 PLEKHJ1Q9NW61 149 aa14.13□□□□□ -0.15
NCKIPSD-209ENST00000470006 GHRLQ9UBU3 117 aa14.13□□□□□ -0.15
NCKIPSD-209ENST00000470006 TRBV5-7A0A0A0MS05 114 aa14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 PNMA8CA0A1B0GUJ8 204 aa14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 LGALS9O00182 355 aa14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 OR2J3O76001 311 aa14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 ATF4P18848 351 aaPredicted RBP14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 MAP2K4P45985 399 aa14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 RPS11P62280 158 aaKnown RBP eCLIP14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 HLA-DRB3P79483 266 aa14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 ZNF45Q02386 682 aa14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 VMA21Q3ZAQ7 101 aa14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 FAM209BQ5JX69 171 aa14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 RBPMS2Q6ZRY4 209 aaKnown RBP14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 STPG3Q8N7X2 389 aa14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 NKAIN3Q8N8D7 197 aa14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 UXS1Q8NBZ7 420 aa14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 NECAP1Q8NC96 275 aa14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 PTX4Q96A99 478 aa14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 UQCC2Q9BRT2 126 aa14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 TMEM59Q9BXS4 323 aa14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 MLXQ9UH92 298 aa14.12□□□□□ -0.15
NCKIPSD-209ENST00000470006 UBE2CO00762 179 aa14.11□□□□□ -0.15
NCKIPSD-209ENST00000470006 ACTL6BO94805 426 aa14.11□□□□□ -0.15
NCKIPSD-209ENST00000470006 LALBAP00709 142 aa14.11□□□□□ -0.15
NCKIPSD-209ENST00000470006 SCTP09683 121 aa14.11□□□□□ -0.15
NCKIPSD-209ENST00000470006 MYL12AP19105 171 aa14.11□□□□□ -0.15
NCKIPSD-209ENST00000470006 HTR2CP28335 458 aa14.11□□□□□ -0.15
NCKIPSD-209ENST00000470006 PRR20EP86478 221 aa14.11□□□□□ -0.15
NCKIPSD-209ENST00000470006 PRR20CP86479 221 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms