RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 TMEM33P57088 247 aa14.87□□□□□ -0.03
SMC4-211ENST00000469858 WDR25Q64LD2 544 aaPredicted RBP14.87□□□□□ -0.03
SMC4-211ENST00000469858 SLC7A5P1Q8MH63 180 aa14.87□□□□□ -0.03
SMC4-211ENST00000469858 OR8H3Q8N146 312 aa14.87□□□□□ -0.03
SMC4-211ENST00000469858 CD300LFQ8TDQ1 290 aa14.87□□□□□ -0.03
SMC4-211ENST00000469858 RAB39BQ96DA2 213 aa14.87□□□□□ -0.03
SMC4-211ENST00000469858 ZNF251Q9BRH9 671 aa14.87□□□□□ -0.03
SMC4-211ENST00000469858 GPR37O15354 613 aa14.86□□□□□ -0.03
SMC4-211ENST00000469858 EFNA4P52798 201 aa14.86□□□□□ -0.03
SMC4-211ENST00000469858 UBA52P62987 128 aaKnown RBP14.86□□□□□ -0.03
SMC4-211ENST00000469858 ID3Q02535 119 aa14.86□□□□□ -0.03
SMC4-211ENST00000469858 ALKAL2Q6UX46 152 aa14.86□□□□□ -0.03
SMC4-211ENST00000469858 ST8SIA2Q92186 375 aa14.86□□□□□ -0.03
SMC4-211ENST00000469858 PLEKHA2Q9HB19 425 aa14.86□□□□□ -0.03
SMC4-211ENST00000469858 PRELID3BQ9Y3B1 194 aa14.86□□□□□ -0.03
SMC4-211ENST00000469858 MMP24Q9Y5R2 645 aa14.86□□□□□ -0.03
SMC4-211ENST00000469858 AKAP6Q13023 2319 aa14.85□□□□□ -0.03
SMC4-211ENST00000469858 WRBO00258 174 aa14.85□□□□□ -0.03
SMC4-211ENST00000469858 ATG12O94817 140 aa14.85□□□□□ -0.03
SMC4-211ENST00000469858 GPR6P46095 362 aaPredicted RBP14.85□□□□□ -0.03
SMC4-211ENST00000469858 NDUFA5Q16718 116 aa14.85□□□□□ -0.03
SMC4-211ENST00000469858 S1PR3Q99500 378 aa14.85□□□□□ -0.03
SMC4-211ENST00000469858 MYO18BQ8IUG5 2567 aa14.85□□□□□ -0.03
SMC4-211ENST00000469858 IGHV1-8P0DP01 117 aa14.85□□□□□ -0.03
SMC4-211ENST00000469858 PVALBP20472 110 aaPredicted RBP14.85□□□□□ -0.03
SMC4-211ENST00000469858 P2RY1P47900 373 aa14.85□□□□□ -0.03
SMC4-211ENST00000469858 TLE4Q04727 773 aa14.85□□□□□ -0.03
SMC4-211ENST00000469858 SPOCK3Q9BQ16 436 aa14.85□□□□□ -0.03
SMC4-211ENST00000469858 PPIAL4CA0A0B4J2A2 164 aa14.84□□□□□ -0.03
SMC4-211ENST00000469858 PPIAL4GP0DN37 164 aa14.84□□□□□ -0.03
SMC4-211ENST00000469858 GNB2P62879 340 aa14.84□□□□□ -0.03
SMC4-211ENST00000469858 VAMP2P63027 116 aa14.84□□□□□ -0.03
SMC4-211ENST00000469858 SRSF1Q07955 248 aaKnown RBP eCLIP14.84□□□□□ -0.039e-8■■□□□ 13.7
SMC4-211ENST00000469858 C11orf42Q8N5U0 333 aa14.84□□□□□ -0.03
SMC4-211ENST00000469858 DDB2Q92466 427 aa14.84□□□□□ -0.03
SMC4-211ENST00000469858 C11orf1Q9H5F2 150 aa14.84□□□□□ -0.03
SMC4-211ENST00000469858 PATZ1Q9HBE1 687 aaKnown RBP14.84□□□□□ -0.03
SMC4-211ENST00000469858 MARCH11A6NNE9 402 aa14.84□□□□□ -0.03
SMC4-211ENST00000469858 OVOL3O00110 214 aa14.84□□□□□ -0.03
SMC4-211ENST00000469858 HPRT1P00492 218 aa14.84□□□□□ -0.03
SMC4-211ENST00000469858 P0C879 139 aa14.84□□□□□ -0.03
SMC4-211ENST00000469858 THBS3P49746 956 aa14.84□□□□□ -0.03
SMC4-211ENST00000469858 CLEC9AQ6UXN8 241 aa14.84□□□□□ -0.03
SMC4-211ENST00000469858 H2BFWTQ7Z2G1 175 aa14.84□□□□□ -0.03
SMC4-211ENST00000469858 PCNPQ8WW12 178 aaKnown RBP14.84□□□□□ -0.03
SMC4-211ENST00000469858 R3HDM4Q96D70 268 aa14.84□□□□□ -0.03
SMC4-211ENST00000469858 A0A1W2PPH5 198 aa14.83□□□□□ -0.04
SMC4-211ENST00000469858 RBFOX2O43251 390 aaKnown RBP eCLIP14.83□□□□□ -0.043e-8■■■■■ 54.1
SMC4-211ENST00000469858 CHST1O43916 411 aa14.83□□□□□ -0.04
SMC4-211ENST00000469858 KIR2DS2P43631 304 aa14.83□□□□□ -0.04
SMC4-211ENST00000469858 CAV2P51636 162 aa14.83□□□□□ -0.04
SMC4-211ENST00000469858 ZNF383Q8NA42 475 aa14.83□□□□□ -0.04
SMC4-211ENST00000469858 OR10X1Q8NGY0 326 aa14.83□□□□□ -0.04
SMC4-211ENST00000469858 CYTL1Q9NRR1 136 aa14.83□□□□□ -0.04
SMC4-211ENST00000469858 KIAA1324LA8MWY0 1029 aaPredicted RBP14.82□□□□□ -0.04
SMC4-211ENST00000469858 J3QR06 171 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 GPR137BO60478 399 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 OR2C3Q8N628 320 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 OR4S2Q8NH73 311 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 C8orf46Q8TAG6 207 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 ADTRPQ96IZ2 230 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 SMIM3Q9BZL3 60 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 FBXL17Q9UF56 701 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 SESN1Q9Y6P5 492 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 FAM24AA6NFZ4 105 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 ARHGAP32A7KAX9 2087 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 C22orf46C9J442 243 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 TMEM50AO95807 157 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 DLX1P56177 255 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 GPR157Q5UAW9 335 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 SSX9Q7RTT3 188 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 ABHD12Q8N2K0 398 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 ZNF525Q8N782 197 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 SCARB1Q8WTV0 552 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 CCL19Q99731 98 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 SSBP3Q9BWW4 388 aaPredicted RBP14.82□□□□□ -0.04
SMC4-211ENST00000469858 TMEM133Q9H2Q1 129 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 COA4Q9NYJ1 87 aa14.82□□□□□ -0.04
SMC4-211ENST00000469858 A0A087X0M5 115 aa14.81□□□□□ -0.04
SMC4-211ENST00000469858 A0A1B0GX30 115 aa14.81□□□□□ -0.04
SMC4-211ENST00000469858 CRYZL1O95825 349 aa14.81□□□□□ -0.04
SMC4-211ENST00000469858 MIDNQ504T8 468 aa14.81□□□□□ -0.04
SMC4-211ENST00000469858 ZNF833PQ6ZTB9 187 aa14.81□□□□□ -0.04
SMC4-211ENST00000469858 OR9G1Q8NH87 305 aa14.81□□□□□ -0.04
SMC4-211ENST00000469858 BSCL2Q96G97 398 aaPredicted RBP14.81□□□□□ -0.04
SMC4-211ENST00000469858 ONECUT1Q9UBC0 465 aa14.81□□□□□ -0.04
SMC4-211ENST00000469858 TOR1AO14656 332 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 TAAR5O14804 337 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 CT45A6P0DMU7 189 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 CT45A5P0DMU8 189 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 CT45A7P0DMV0 189 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 TPT1P13693 172 aaKnown RBP14.8□□□□□ -0.04
SMC4-211ENST00000469858 MMP9P14780 707 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 RAB14P61106 215 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 NHLH2Q02577 135 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 PRB3Q04118 309 aaPredicted RBP14.8□□□□□ -0.04
SMC4-211ENST00000469858 VKORC1L1Q8N0U8 176 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 C8orf31Q8N9H6 132 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 STOML3Q8TAV4 291 aa14.8□□□□□ -0.04
SMC4-211ENST00000469858 RBMXL1Q96E39 390 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms