RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 FKBP14Q9NWM8 211 aa9.34□□□□□ -0.91
HDAC3-204ENST00000469207 TRBV6-6A0A0A6YYG2 114 aa9.33□□□□□ -0.92
HDAC3-204ENST00000469207 FOXI3A8MTJ6 420 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-204ENST00000469207 PTGES3LE9PB15 166 aa9.33□□□□□ -0.92
HDAC3-204ENST00000469207 M0R1X1 148 aa9.33□□□□□ -0.92
HDAC3-204ENST00000469207 CRYGBP07316 175 aa9.33□□□□□ -0.92
HDAC3-204ENST00000469207 CD37P11049 281 aa9.33□□□□□ -0.92
HDAC3-204ENST00000469207 VEGFCP49767 419 aa9.33□□□□□ -0.92
HDAC3-204ENST00000469207 MRGPRG-AS1Q2M3A8 158 aa9.33□□□□□ -0.92
HDAC3-204ENST00000469207 PLAC9Q5JTB6 97 aa9.33□□□□□ -0.92
HDAC3-204ENST00000469207 C8orf59Q8N0T1 100 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-204ENST00000469207 FAM89BQ8N5H3 189 aa9.33□□□□□ -0.92
HDAC3-204ENST00000469207 OR9G4Q8NGQ1 327 aa9.33□□□□□ -0.92
HDAC3-204ENST00000469207 PTX4Q96A99 478 aa9.33□□□□□ -0.92
HDAC3-204ENST00000469207 C5orf30Q96GV9 206 aa9.33□□□□□ -0.92
HDAC3-204ENST00000469207 ARHGAP5-AS1Q96IT6 56 aa9.33□□□□□ -0.92
HDAC3-204ENST00000469207 TSNAXQ99598 290 aaKnown RBP9.33□□□□□ -0.92
HDAC3-204ENST00000469207 FAM110AQ9BQ89 295 aa9.33□□□□□ -0.92
HDAC3-204ENST00000469207 THAP7Q9BT49 309 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-204ENST00000469207 PECRQ9BY49 303 aa9.33□□□□□ -0.92
HDAC3-204ENST00000469207 SLC35D1Q9NTN3 355 aa9.33□□□□□ -0.92
HDAC3-204ENST00000469207 PLCXD1Q9NUJ7 323 aa9.33□□□□□ -0.92
HDAC3-204ENST00000469207 RDH8Q9NYR8 311 aa9.33□□□□□ -0.92
HDAC3-204ENST00000469207 ZNF221Q9UK13 617 aa9.33□□□□□ -0.92
HDAC3-204ENST00000469207 AK6Q9Y3D8 172 aaKnown RBP9.33□□□□□ -0.92
HDAC3-204ENST00000469207 ZP3P21754 424 aa9.32□□□□□ -0.92
HDAC3-204ENST00000469207 HSD17B12Q53GQ0 312 aa9.32□□□□□ -0.92
HDAC3-204ENST00000469207 IGSF11Q5DX21 431 aa9.32□□□□□ -0.92
HDAC3-204ENST00000469207 TMEM91Q6ZNR0 172 aa9.32□□□□□ -0.92
HDAC3-204ENST00000469207 MS4A15Q8N5U1 240 aa9.32□□□□□ -0.92
HDAC3-204ENST00000469207 FBLIM1Q8WUP2 373 aa9.32□□□□□ -0.92
HDAC3-204ENST00000469207 EDARADDQ8WWZ3 215 aa9.32□□□□□ -0.92
HDAC3-204ENST00000469207 PHYHIPQ92561 330 aa9.32□□□□□ -0.92
HDAC3-204ENST00000469207 SPATA25Q9BR10 227 aa9.32□□□□□ -0.92
HDAC3-204ENST00000469207 RIMS4Q9H426 269 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-204ENST00000469207 TUBA4BQ9H853 241 aa9.32□□□□□ -0.92
HDAC3-204ENST00000469207 PEF1Q9UBV8 284 aaKnown RBP9.32□□□□□ -0.92
HDAC3-204ENST00000469207 SELENOKQ9Y6D0 94 aa9.32□□□□□ -0.92
HDAC3-204ENST00000469207 A0A0G2JLM5 398 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 MSGN1A6NI15 193 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 BPNT1O95861 308 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 PRH1P02810 166 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 CDK1P06493 297 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 UCHL1P09936 223 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 GSTT2P0CG29 244 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 GSTT2BP0CG30 244 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 EDN2P20800 178 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 LIPKQ5VXJ0 399 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 ZNF343Q6P1L6 599 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 MOB1BQ7L9L4 216 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 PDPNQ86YL7 162 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 BVESQ8NE79 360 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 OR6M1Q8NGM8 313 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 MAFIPQ8WZ33 124 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 THRSPQ92748 146 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 CMSS1Q9BQ75 279 aaKnown RBP9.31□□□□□ -0.92
HDAC3-204ENST00000469207 TINAGL1Q9GZM7 467 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-204ENST00000469207 PLEKHA3Q9HB20 300 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 PLGRKTQ9HBL7 147 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 SDHAF2Q9NX18 166 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 COA4Q9NYJ1 87 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 HSF4Q9ULV5 492 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 KCNK7Q9Y2U2 307 aa9.31□□□□□ -0.92
HDAC3-204ENST00000469207 LSM2Q9Y333 95 aaKnown RBP9.31□□□□□ -0.92
HDAC3-204ENST00000469207 TRDCB7Z8K6 153 aa9.3□□□□□ -0.92
HDAC3-204ENST00000469207 H0Y980 276 aa9.3□□□□□ -0.92
HDAC3-204ENST00000469207 BET1O15155 118 aa9.3□□□□□ -0.92
HDAC3-204ENST00000469207 SPDEFO95238 335 aa9.3□□□□□ -0.92
HDAC3-204ENST00000469207 APOA2P02652 100 aa9.3□□□□□ -0.92
HDAC3-204ENST00000469207 SPHARQ15513 63 aa9.3□□□□□ -0.92
HDAC3-204ENST00000469207 MED22Q15528 200 aa9.3□□□□□ -0.92
HDAC3-204ENST00000469207 C2orf76Q3KRA6 126 aa9.3□□□□□ -0.92
HDAC3-204ENST00000469207 IDO2Q6ZQW0 420 aa9.3□□□□□ -0.92
HDAC3-204ENST00000469207 PACRGLQ8N7B6 248 aa9.3□□□□□ -0.92
HDAC3-204ENST00000469207 URM1Q9BTM9 101 aaKnown RBP9.3□□□□□ -0.92
HDAC3-204ENST00000469207 WFDC10AQ9H1F0 79 aa9.3□□□□□ -0.92
HDAC3-204ENST00000469207 OR2D2Q9H210 308 aa9.3□□□□□ -0.92
HDAC3-204ENST00000469207 ZNF230Q9UIE0 474 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-204ENST00000469207 H3BUA1 57 aa9.29□□□□□ -0.92
HDAC3-204ENST00000469207 J3QRK9 145 aa9.29□□□□□ -0.92
HDAC3-204ENST00000469207 SLC17A2O00624 439 aa9.29□□□□□ -0.92
HDAC3-204ENST00000469207 SHOXO15266 292 aa9.29□□□□□ -0.92
HDAC3-204ENST00000469207 CD7P09564 240 aa9.29□□□□□ -0.92
HDAC3-204ENST00000469207 MECP2P51608 486 aaKnown RBP9.29□□□□□ -0.92
HDAC3-204ENST00000469207 RPS25P62851 125 aaKnown RBP9.29□□□□□ -0.92
HDAC3-204ENST00000469207 TAGLNQ01995 201 aaKnown RBP9.29□□□□□ -0.92
HDAC3-204ENST00000469207 RCN1Q15293 331 aa9.29□□□□□ -0.92
HDAC3-204ENST00000469207 RPEL1Q2QD12 228 aa9.29□□□□□ -0.92
HDAC3-204ENST00000469207 MOGAT2Q3SYC2 334 aa9.29□□□□□ -0.92
HDAC3-204ENST00000469207 LINC00322Q6ZN03 302 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-204ENST00000469207 DEFB125Q8N687 156 aa9.29□□□□□ -0.92
HDAC3-204ENST00000469207 HARBI1Q96MB7 349 aa9.29□□□□□ -0.92
HDAC3-204ENST00000469207 PHB2Q99623 299 aa9.29□□□□□ -0.92
HDAC3-204ENST00000469207 MND1Q9BWT6 205 aa9.29□□□□□ -0.92
HDAC3-204ENST00000469207 HIPK2Q9H2X6 1198 aa9.29□□□□□ -0.92
HDAC3-204ENST00000469207 C12orf4Q9NQ89 552 aa9.29□□□□□ -0.92
HDAC3-204ENST00000469207 ALMS1Q8TCU4 4167 aa9.28□□□□□ -0.92
HDAC3-204ENST00000469207 RBMY1BA6NDE4 496 aaKnown RBP9.28□□□□□ -0.92
HDAC3-204ENST00000469207 RBMY1EA6NEQ0 496 aaKnown RBP9.28□□□□□ -0.92
HDAC3-204ENST00000469207 ZNF785A8K8V0 405 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms