RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 NAA60Q9H7X0 242 aa14.21□□□□□ -0.13
RPL39-202ENST00000468844 TEX13DA0A0J9YY54 714 aaPredicted RBP14.21□□□□□ -0.14
RPL39-202ENST00000468844 C9orf170A2RU37 121 aa14.21□□□□□ -0.14
RPL39-202ENST00000468844 AVPP01185 164 aa14.21□□□□□ -0.14
RPL39-202ENST00000468844 DUTP33316 252 aaKnown RBP14.21□□□□□ -0.14
RPL39-202ENST00000468844 RPL30P62888 115 aaKnown RBP14.21□□□□□ -0.14
RPL39-202ENST00000468844 LYG2Q86SG7 212 aa14.21□□□□□ -0.14
RPL39-202ENST00000468844 SGPP2Q8IWX5 399 aa14.21□□□□□ -0.14
RPL39-202ENST00000468844 OR51H1Q8NH63 302 aa14.21□□□□□ -0.14
RPL39-202ENST00000468844 CENPVL3A0A0U1RRI6 287 aa14.2□□□□□ -0.14
RPL39-202ENST00000468844 A0A1W2PRD5 423 aa14.2□□□□□ -0.14
RPL39-202ENST00000468844 A0A1W2PRF3 423 aa14.2□□□□□ -0.14
RPL39-202ENST00000468844 A0A1W2PRM7 423 aa14.2□□□□□ -0.14
RPL39-202ENST00000468844 F2RP25116 425 aa14.2□□□□□ -0.14
RPL39-202ENST00000468844 UBE2E1P51965 193 aa14.2□□□□□ -0.14
RPL39-202ENST00000468844 GALNT14Q96FL9 552 aa14.2□□□□□ -0.14
RPL39-202ENST00000468844 TP53RKQ96S44 253 aa14.2□□□□□ -0.14
RPL39-202ENST00000468844 S1PR3Q99500 378 aa14.2□□□□□ -0.14
RPL39-202ENST00000468844 HSPB11Q9Y547 144 aa14.2□□□□□ -0.14
RPL39-202ENST00000468844 NSD1Q96L73 2696 aaPredicted RBP14.2□□□□□ -0.14
RPL39-202ENST00000468844 PLXNB1O43157 2135 aa14.2□□□□□ -0.14
RPL39-202ENST00000468844 TRAV40A0A0B4J280 105 aa14.19□□□□□ -0.14
RPL39-202ENST00000468844 M0R1X1 148 aa14.19□□□□□ -0.14
RPL39-202ENST00000468844 OR5AC1P0C628 307 aa14.19□□□□□ -0.14
RPL39-202ENST00000468844 S100GP29377 79 aa14.19□□□□□ -0.14
RPL39-202ENST00000468844 CYB5R2Q6BCY4 276 aa14.19□□□□□ -0.14
RPL39-202ENST00000468844 C9orf62Q8N4C0 152 aa14.19□□□□□ -0.14
RPL39-202ENST00000468844 HSD17B10Q99714 261 aaKnown RBP14.19□□□□□ -0.14
RPL39-202ENST00000468844 PRR13Q9NZ81 148 aa14.19□□□□□ -0.14
RPL39-202ENST00000468844 MAST4O15021 2626 aa14.19□□□□□ -0.14
RPL39-202ENST00000468844 C3orf85A0A1B0GTC6 90 aa14.19□□□□□ -0.14
RPL39-202ENST00000468844 CREBL2O60519 120 aaPredicted RBP14.19□□□□□ -0.14
RPL39-202ENST00000468844 SFT2D2O95562 160 aa14.19□□□□□ -0.14
RPL39-202ENST00000468844 REG1BP48304 166 aa14.19□□□□□ -0.14
RPL39-202ENST00000468844 SLC9A3R2Q15599 337 aa14.19□□□□□ -0.14
RPL39-202ENST00000468844 SP6Q3SY56 376 aa14.19□□□□□ -0.14
RPL39-202ENST00000468844 KCTD9Q7L273 389 aa14.19□□□□□ -0.14
RPL39-202ENST00000468844 LHFPL4Q7Z7J7 247 aa14.19□□□□□ -0.14
RPL39-202ENST00000468844 ZNF431Q8TF32 576 aaPredicted RBP14.19□□□□□ -0.14
RPL39-202ENST00000468844 CASTOR1Q8WTX7 329 aa14.19□□□□□ -0.14
RPL39-202ENST00000468844 GLYATL2Q8WU03 294 aa14.19□□□□□ -0.14
RPL39-202ENST00000468844 RANBP3Q9H6Z4 567 aaPredicted RBP14.19□□□□□ -0.14
RPL39-202ENST00000468844 SNRPGP15A8MWD9 76 aa14.18□□□□□ -0.14
RPL39-202ENST00000468844 LY6LH3BQJ8 138 aa14.18□□□□□ -0.14
RPL39-202ENST00000468844 ANXA3P12429 323 aa14.18□□□□□ -0.14
RPL39-202ENST00000468844 HTR1DP28221 377 aa14.18□□□□□ -0.14
RPL39-202ENST00000468844 BRWD1-AS2P59051 145 aa14.18□□□□□ -0.14
RPL39-202ENST00000468844 FAM71F2Q6NXP2 309 aa14.18□□□□□ -0.14
RPL39-202ENST00000468844 ZNF66Q6ZN08 573 aa14.18□□□□□ -0.14
RPL39-202ENST00000468844 ZNF767PQ75MW2 155 aa14.18□□□□□ -0.14
RPL39-202ENST00000468844 GPN1Q9HCN4 374 aaPredicted RBP14.18□□□□□ -0.14
RPL39-202ENST00000468844 AMMECR1Q9Y4X0 333 aaPredicted RBP14.18□□□□□ -0.14
RPL39-202ENST00000468844 J3QLI3 93 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 DUS4LO95620 317 aaKnown RBP14.17□□□□□ -0.14
RPL39-202ENST00000468844 IFNA2P01563 188 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 CT45A6P0DMU7 189 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 CT45A5P0DMU8 189 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 CT45A7P0DMV0 189 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 IGHV4-38-2P0DP08 117 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 IL3RAP26951 378 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 MITD1Q8WV92 249 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 TCTEX1D2Q8WW35 142 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 LIN7CQ9NUP9 197 aaKnown RBP14.17□□□□□ -0.14
RPL39-202ENST00000468844 KCNIP3Q9Y2W7 256 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 TET2Q6N021 2002 aaPredicted RBP14.17□□□□□ -0.14
RPL39-202ENST00000468844 H0Y980 276 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 CXCL3P19876 107 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 HTR2BP41595 481 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 KRTAP1-1Q07627 177 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 CATR1Q13166 79 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 TMEM187Q14656 261 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 ANKRD55Q3KP44 614 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 OR2B11Q5JQS5 317 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 TGIF2LXQ8IUE1 241 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 PIP4P2Q8N4L2 257 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 ZNF383Q8NA42 475 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 C17orf50Q8WW18 174 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 DDB2Q92466 427 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 MRPL20Q9BYC9 149 aaKnown RBP14.17□□□□□ -0.14
RPL39-202ENST00000468844 TMEM222Q9H0R3 208 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 DPM3Q9P2X0 92 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 F8P00451 2351 aa14.17□□□□□ -0.14
RPL39-202ENST00000468844 IGHV3OR16-10A0A075B7F0 116 aa14.16□□□□□ -0.14
RPL39-202ENST00000468844 RNF212BA8MTL3 300 aa14.16□□□□□ -0.14
RPL39-202ENST00000468844 LEUTXA8MZ59 168 aa14.16□□□□□ -0.14
RPL39-202ENST00000468844 RAMP3O60896 148 aa14.16□□□□□ -0.14
RPL39-202ENST00000468844 SULT1A3P0DMM9 295 aa14.16□□□□□ -0.14
RPL39-202ENST00000468844 SULT1A4P0DMN0 295 aa14.16□□□□□ -0.14
RPL39-202ENST00000468844 PAX6P26367 422 aa14.16□□□□□ -0.14
RPL39-202ENST00000468844 SAA4P35542 130 aa14.16□□□□□ -0.14
RPL39-202ENST00000468844 KLF17Q5JT82 389 aaPredicted RBP14.16□□□□□ -0.14
RPL39-202ENST00000468844 THOC7Q6I9Y2 204 aaKnown RBP14.16□□□□□ -0.14
RPL39-202ENST00000468844 LIN54Q6MZP7 749 aa14.16□□□□□ -0.14
RPL39-202ENST00000468844 LHFPL5Q8TAF8 219 aa14.16□□□□□ -0.14
RPL39-202ENST00000468844 RBMXL1Q96E39 390 aaKnown RBP14.16□□□□□ -0.14
RPL39-202ENST00000468844 HIVEP2P31629 2446 aa14.16□□□□□ -0.14
RPL39-202ENST00000468844 UCP1P25874 307 aa14.15□□□□□ -0.14
RPL39-202ENST00000468844 GPR157Q5UAW9 335 aa14.15□□□□□ -0.14
RPL39-202ENST00000468844 RUSC1-AS1Q66K80 236 aa14.15□□□□□ -0.14
RPL39-202ENST00000468844 BRD3OSQ6XYD6 125 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms