RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 ZZEF1O43149 2961 aa6.3□□□□□ -1.4
COL6A3-208ENST00000468792 TRAV1-1A0A0B4J248 108 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 MARCH11A6NNE9 402 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 LINC00473A8K010 186 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 C17orf98A8MV24 154 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 ST8SIA5O15466 376 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 RAMP3O60896 148 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 FBXO24O75426 580 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 CYB5R3P00387 301 aaPredicted RBP6.29□□□□□ -1.4
COL6A3-208ENST00000468792 IFNA5P01569 189 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 ZNF16P17020 682 aaPredicted RBP6.29□□□□□ -1.4
COL6A3-208ENST00000468792 ATP6V0CP27449 155 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 THBS3P49746 956 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 DYNLT3P51808 116 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 ZNF134P52741 427 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 EDDM3BP56851 147 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 SERF2P84101 59 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 HOXA4Q00056 320 aaPredicted RBP6.29□□□□□ -1.4
COL6A3-208ENST00000468792 PMS2P11Q13670 270 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 DHRS7BQ6IAN0 325 aaPredicted RBP6.29□□□□□ -1.4
COL6A3-208ENST00000468792 ADAM5Q6NVV9 412 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 HEPN1Q6WQI6 88 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 Q6ZRG5 221 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 SLC25A48Q6ZT89 311 aaKnown RBP6.29□□□□□ -1.4
COL6A3-208ENST00000468792 TCF23Q7RTU1 214 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 H2BFWTQ7Z2G1 175 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 ZNF429Q86V71 674 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 SVBPQ8N300 66 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 LINC00311Q8N616 119 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 BOLLQ8N9W6 283 aaKnown RBP6.29□□□□□ -1.4
COL6A3-208ENST00000468792 RFESDQ8TAC1 157 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 UBALD1Q8TB05 177 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 RAB39BQ96DA2 213 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 PLPPR2Q96GM1 343 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 ZNF251Q9BRH9 671 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 AIFM2Q9BRQ8 373 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 DCTN5Q9BTE1 182 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 ABHD14AQ9BUJ0 271 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 SMIM3Q9BZL3 60 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 GAL3ST2Q9H3Q3 398 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 NARFLQ9H6Q4 476 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 TMEM106BQ9NUM4 274 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 UQCC1Q9NVA1 299 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 PSENENQ9NZ42 101 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 TIMM9Q9Y5J7 89 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 KALRNO60229 2985 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 DYSFO75923 2080 aa6.29□□□□□ -1.4
COL6A3-208ENST00000468792 PCNX1Q96RV3 2341 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 ANKHD1Q8IWZ3 2542 aaKnown RBP6.28□□□□□ -1.4
COL6A3-208ENST00000468792 A0A087X0M5 115 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 TRBV23-1A0A0A0MS06 115 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.28□□□□□ -1.4
COL6A3-208ENST00000468792 A0A1B0GX30 115 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 TMEM8BA6NDV4 472 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 RNASEK-C17orf49H0YIS7 233 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 CCL21O00585 134 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 NDUFS6O75380 124 aaKnown RBP6.28□□□□□ -1.4
COL6A3-208ENST00000468792 CST7O76096 145 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 S1PR2O95136 353 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 TSPAN15O95858 294 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 KRASP01116 189 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 GYPAP02724 150 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 TFF1P04155 84 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 IL6RP08887 468 aaPredicted RBP6.28□□□□□ -1.4
COL6A3-208ENST00000468792 DAOP14920 347 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 NQO2P16083 231 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 EPHA1P21709 976 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 OMGP23515 440 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 SNCAP37840 140 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 PPOXP50336 477 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 ATP5IP56385 69 aaPredicted RBP6.28□□□□□ -1.4
COL6A3-208ENST00000468792 SPCS3P61009 180 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 GNB2P62879 340 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 RPP30P78346 268 aaKnown RBP6.28□□□□□ -1.4
COL6A3-208ENST00000468792 CCL8P80075 99 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 MRPS11P82912 194 aaKnown RBP6.28□□□□□ -1.4
COL6A3-208ENST00000468792 PEA15Q15121 130 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 VWC2Q2TAL6 325 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 LRRC75BQ2VPJ9 315 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 CT45A1Q5HYN5 189 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 NCR3LG1Q68D85 454 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 ZNF808Q8N4W9 903 aaPredicted RBP6.28□□□□□ -1.4
COL6A3-208ENST00000468792 OR2G3Q8NGZ4 309 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 OR4S2Q8NH73 311 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 CT45A3Q8NHU0 189 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 PINX1Q96BK5 328 aaKnown RBP6.28□□□□□ -1.4
COL6A3-208ENST00000468792 R3HDM4Q96D70 268 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 S1PR3Q99500 378 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 CCL13Q99616 98 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 GGACTQ9BVM4 153 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 SCRT1Q9BWW7 348 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 HRH4Q9H3N8 390 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 RBKSQ9H477 322 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 KCNJ16Q9NPI9 418 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 C19orf12Q9NSK7 152 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 SLC25A10Q9UBX3 287 aaPredicted RBP6.28□□□□□ -1.4
COL6A3-208ENST00000468792 SH3BGRL2Q9UJC5 107 aa6.28□□□□□ -1.4
COL6A3-208ENST00000468792 TANC2Q9HCD6 1990 aa6.27□□□□□ -1.4
COL6A3-208ENST00000468792 CACNA1AO00555 2505 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 ICE1Q9Y2F5 2266 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms