RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 THBS3P49746 956 aa15.53■□□□□ 0.08
SMC4-209ENST00000468653 CXorf66Q5JRM2 361 aaPredicted RBP15.53■□□□□ 0.08
SMC4-209ENST00000468653 C11orf42Q8N5U0 333 aa15.53■□□□□ 0.08
SMC4-209ENST00000468653 ADTRPQ96IZ2 230 aa15.53■□□□□ 0.08
SMC4-209ENST00000468653 ZNF251Q9BRH9 671 aa15.53■□□□□ 0.08
SMC4-209ENST00000468653 CACNG5Q9UF02 275 aa15.53■□□□□ 0.08
SMC4-209ENST00000468653 MMP24Q9Y5R2 645 aa15.53■□□□□ 0.08
SMC4-209ENST00000468653 hCG_1809904A0A1W2PP81 198 aa15.52■□□□□ 0.08
SMC4-209ENST00000468653 A0A1W2PPE2 198 aa15.52■□□□□ 0.08
SMC4-209ENST00000468653 A0A1W2PR64 198 aa15.52■□□□□ 0.08
SMC4-209ENST00000468653 A0A1W2PRV1 198 aa15.52■□□□□ 0.08
SMC4-209ENST00000468653 E5RGE8 158 aa15.52■□□□□ 0.08
SMC4-209ENST00000468653 LIPFP07098 398 aa15.52■□□□□ 0.08
SMC4-209ENST00000468653 ABHD12Q8N2K0 398 aa15.52■□□□□ 0.08
SMC4-209ENST00000468653 C8orf31Q8N9H6 132 aa15.52■□□□□ 0.08
SMC4-209ENST00000468653 OR10X1Q8NGY0 326 aa15.52■□□□□ 0.08
SMC4-209ENST00000468653 TMEM133Q9H2Q1 129 aa15.52■□□□□ 0.08
SMC4-209ENST00000468653 ZC4H2Q9NQZ6 224 aa15.52■□□□□ 0.08
SMC4-209ENST00000468653 RCL1Q9Y2P8 373 aaKnown RBP15.52■□□□□ 0.08
SMC4-209ENST00000468653 NSG2Q9Y328 171 aa15.52■□□□□ 0.08
SMC4-209ENST00000468653 LOC105371242A0A075B767 164 aa15.52■□□□□ 0.07
SMC4-209ENST00000468653 A0A087X0M5 115 aa15.52■□□□□ 0.07
SMC4-209ENST00000468653 A0A1B0GX30 115 aa15.52■□□□□ 0.07
SMC4-209ENST00000468653 C22orf46C9J442 243 aa15.52■□□□□ 0.07
SMC4-209ENST00000468653 J3QR06 171 aa15.52■□□□□ 0.07
SMC4-209ENST00000468653 PDLIM4P50479 330 aa15.52■□□□□ 0.07
SMC4-209ENST00000468653 TEX261Q6UWH6 196 aa15.52■□□□□ 0.07
SMC4-209ENST00000468653 Q6ZRM9 215 aa15.52■□□□□ 0.07
SMC4-209ENST00000468653 LY6G5BQ8NDX9 201 aa15.52■□□□□ 0.07
SMC4-209ENST00000468653 OR9G1Q8NH87 305 aa15.52■□□□□ 0.07
SMC4-209ENST00000468653 AQP10Q96PS8 301 aa15.52■□□□□ 0.07
SMC4-209ENST00000468653 ONECUT1Q9UBC0 465 aa15.52■□□□□ 0.07
SMC4-209ENST00000468653 U3KQ87 197 aa15.52■□□□□ 0.07
SMC4-209ENST00000468653 COL12A1Q99715 3063 aa15.51■□□□□ 0.07
SMC4-209ENST00000468653 MSGN1A6NI15 193 aa15.51■□□□□ 0.07
SMC4-209ENST00000468653 RBFOX2O43251 390 aaKnown RBP eCLIP15.51■□□□□ 0.073e-8■■■■■ 54.1
SMC4-209ENST00000468653 PITX3O75364 302 aa15.51■□□□□ 0.07
SMC4-209ENST00000468653 NXPH3O95157 252 aa15.51■□□□□ 0.07
SMC4-209ENST00000468653 HPRT1P00492 218 aa15.51■□□□□ 0.07
SMC4-209ENST00000468653 RBP4P02753 201 aa15.51■□□□□ 0.07
SMC4-209ENST00000468653 POLR2GP62487 172 aaKnown RBP eCLIP15.51■□□□□ 0.07
SMC4-209ENST00000468653 ID3Q02535 119 aa15.51■□□□□ 0.07
SMC4-209ENST00000468653 DCHS2Q6V1P9 2916 aa15.51■□□□□ 0.07
SMC4-209ENST00000468653 LINC00311Q8N616 119 aa15.51■□□□□ 0.07
SMC4-209ENST00000468653 MAGT1Q9H0U3 335 aa15.51■□□□□ 0.07
SMC4-209ENST00000468653 PLEKHA2Q9HB19 425 aa15.51■□□□□ 0.07
SMC4-209ENST00000468653 WRBO00258 174 aa15.5■□□□□ 0.07
SMC4-209ENST00000468653 TOR1AO14656 332 aa15.5■□□□□ 0.07
SMC4-209ENST00000468653 BCL2L11O43521 198 aa15.5■□□□□ 0.07
SMC4-209ENST00000468653 PVALBP20472 110 aaPredicted RBP15.5■□□□□ 0.07
SMC4-209ENST00000468653 RPL12P30050 165 aaKnown RBP15.5■□□□□ 0.07
SMC4-209ENST00000468653 ZNF767PQ75MW2 155 aa15.5■□□□□ 0.07
SMC4-209ENST00000468653 H2BFWTQ7Z2G1 175 aa15.5■□□□□ 0.07
SMC4-209ENST00000468653 OR4S2Q8NH73 311 aa15.5■□□□□ 0.07
SMC4-209ENST00000468653 ZNF596Q8TC21 504 aa15.5■□□□□ 0.07
SMC4-209ENST00000468653 DDB2Q92466 427 aa15.5■□□□□ 0.07
SMC4-209ENST00000468653 R3HDM4Q96D70 268 aa15.5■□□□□ 0.07
SMC4-209ENST00000468653 BPESC1Q9GZL8 116 aa15.5■□□□□ 0.07
SMC4-209ENST00000468653 FAM208BQ5VWN6 2430 aa15.5■□□□□ 0.07
SMC4-209ENST00000468653 ZNF833PQ6ZTB9 187 aa15.49■□□□□ 0.07
SMC4-209ENST00000468653 SLC51BQ86UW2 128 aa15.49■□□□□ 0.07
SMC4-209ENST00000468653 ZNF383Q8NA42 475 aa15.49■□□□□ 0.07
SMC4-209ENST00000468653 DMBX1Q8NFW5 382 aa15.49■□□□□ 0.07
SMC4-209ENST00000468653 ARPC5LQ9BPX5 153 aa15.49■□□□□ 0.07
SMC4-209ENST00000468653 KMT2BQ9UMN6 2715 aaPredicted RBP15.49■□□□□ 0.07
SMC4-209ENST00000468653 MARCH11A6NNE9 402 aa15.49■□□□□ 0.07
SMC4-209ENST00000468653 SSSCA1O60232 199 aa15.49■□□□□ 0.07
SMC4-209ENST00000468653 IGHV2-5P01817 119 aa15.49■□□□□ 0.07
SMC4-209ENST00000468653 HKR1P10072 659 aa15.49■□□□□ 0.07
SMC4-209ENST00000468653 VAMP2P63027 116 aa15.49■□□□□ 0.07
SMC4-209ENST00000468653 ZNF680Q8NEM1 530 aa15.49■□□□□ 0.07
SMC4-209ENST00000468653 IFNA7P01567 189 aa15.48■□□□□ 0.07
SMC4-209ENST00000468653 P0C879 139 aa15.48■□□□□ 0.07
SMC4-209ENST00000468653 CT45A6P0DMU7 189 aa15.48■□□□□ 0.07
SMC4-209ENST00000468653 CT45A5P0DMU8 189 aa15.48■□□□□ 0.07
SMC4-209ENST00000468653 CT45A7P0DMV0 189 aa15.48■□□□□ 0.07
SMC4-209ENST00000468653 P2RY1P47900 373 aa15.48■□□□□ 0.07
SMC4-209ENST00000468653 PRRX1P54821 245 aa15.48■□□□□ 0.07
SMC4-209ENST00000468653 ATP5J2P56134 94 aa15.48■□□□□ 0.07
SMC4-209ENST00000468653 ERVK-16P61578 105 aa15.48■□□□□ 0.07
SMC4-209ENST00000468653 TMEM186Q96B77 213 aa15.48■□□□□ 0.07
SMC4-209ENST00000468653 COA4Q9NYJ1 87 aa15.48■□□□□ 0.07
SMC4-209ENST00000468653 IGHV2-26A0A0B4J1V2 119 aa15.47■□□□□ 0.07
SMC4-209ENST00000468653 CRYZL1O95825 349 aa15.47■□□□□ 0.07
SMC4-209ENST00000468653 IL3RAP26951 378 aa15.47■□□□□ 0.07
SMC4-209ENST00000468653 TNFRSF14Q92956 283 aa15.47■□□□□ 0.07
SMC4-209ENST00000468653 ZNF471Q9BX82 626 aaPredicted RBP15.47■□□□□ 0.07
SMC4-209ENST00000468653 BARX1Q9HBU1 254 aaPredicted RBP15.47■□□□□ 0.07
SMC4-209ENST00000468653 LRRK2Q5S007 2527 aa15.47■□□□□ 0.07
SMC4-209ENST00000468653 CHST1O43916 411 aa15.47■□□□□ 0.07
SMC4-209ENST00000468653 CFDP00746 253 aaPredicted RBP15.47■□□□□ 0.07
SMC4-209ENST00000468653 NQO2P16083 231 aa15.47■□□□□ 0.07
SMC4-209ENST00000468653 DLX1P56177 255 aa15.47■□□□□ 0.07
SMC4-209ENST00000468653 ARF6P62330 175 aa15.47■□□□□ 0.07
SMC4-209ENST00000468653 RTL8BQ17RB0 113 aa15.47■□□□□ 0.07
SMC4-209ENST00000468653 FAM71F2Q6NXP2 309 aa15.47■□□□□ 0.07
SMC4-209ENST00000468653 CLDND2Q8NHS1 167 aa15.47■□□□□ 0.07
SMC4-209ENST00000468653 FAM168AQ92567 244 aa15.47■□□□□ 0.07
SMC4-209ENST00000468653 CLEC7AQ9BXN2 247 aa15.47■□□□□ 0.07
SMC4-209ENST00000468653 MRPL20Q9BYC9 149 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms