RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 IRF3Q14653 427 aa16.18■□□□□ 0.18
COL9A3-207ENST00000467819 ELOVL1Q9BW60 279 aa16.18■□□□□ 0.18
COL9A3-207ENST00000467819 SLC35D1Q9NTN3 355 aa16.18■□□□□ 0.18
COL9A3-207ENST00000467819 RDH8Q9NYR8 311 aa16.18■□□□□ 0.18
COL9A3-207ENST00000467819 CNIH1O95406 144 aa16.17■□□□□ 0.18
COL9A3-207ENST00000467819 POC5Q8NA72 575 aa16.17■□□□□ 0.18
COL9A3-207ENST00000467819 OR5T1Q8NG75 326 aa16.17■□□□□ 0.18
COL9A3-207ENST00000467819 STUB1Q9UNE7 303 aa16.17■□□□□ 0.18
COL9A3-207ENST00000467819 TENM2Q9NT68 2774 aa16.16■□□□□ 0.18
COL9A3-207ENST00000467819 C13orf42A0A1B0GVH6 325 aa16.16■□□□□ 0.18
COL9A3-207ENST00000467819 ANKRD34BA5PLL1 514 aa16.16■□□□□ 0.18
COL9A3-207ENST00000467819 TRDCB7Z8K6 153 aa16.16■□□□□ 0.18
COL9A3-207ENST00000467819 ARL6IP5O75915 188 aa16.16■□□□□ 0.18
COL9A3-207ENST00000467819 PLAC9Q5JTB6 97 aa16.16■□□□□ 0.18
COL9A3-207ENST00000467819 OR56B1Q8NGI3 324 aa16.16■□□□□ 0.18
COL9A3-207ENST00000467819 TNCP24821 2201 aa16.15■□□□□ 0.18
COL9A3-207ENST00000467819 CD3GP09693 182 aa16.15■□□□□ 0.18
COL9A3-207ENST00000467819 CALRP27797 417 aaKnown RBP16.15■□□□□ 0.18
COL9A3-207ENST00000467819 SSBP2P81877 361 aaPredicted RBP16.15■□□□□ 0.18
COL9A3-207ENST00000467819 DEFA5Q01523 94 aa16.15■□□□□ 0.18
COL9A3-207ENST00000467819 PJVKQ0ZLH3 352 aa16.15■□□□□ 0.18
COL9A3-207ENST00000467819 TPBGQ13641 420 aa16.15■□□□□ 0.18
COL9A3-207ENST00000467819 ANKRD13BQ86YJ7 626 aa16.15■□□□□ 0.18
COL9A3-207ENST00000467819 FAM3DQ96BQ1 224 aa16.15■□□□□ 0.18
COL9A3-207ENST00000467819 OR2D2Q9H210 308 aa16.15■□□□□ 0.18
COL9A3-207ENST00000467819 RANGRFQ9HD47 186 aaPredicted RBP16.15■□□□□ 0.18
COL9A3-207ENST00000467819 SACSQ9NZJ4 4579 aa16.15■□□□□ 0.18
COL9A3-207ENST00000467819 BET1O15155 118 aa16.14■□□□□ 0.17
COL9A3-207ENST00000467819 DENRO43583 198 aaKnown RBP16.14■□□□□ 0.17
COL9A3-207ENST00000467819 IGLV1-51P01701 117 aa16.14■□□□□ 0.17
COL9A3-207ENST00000467819 IGHV4-30-4P0DP06 118 aa16.14■□□□□ 0.17
COL9A3-207ENST00000467819 ZP3P21754 424 aa16.14■□□□□ 0.17
COL9A3-207ENST00000467819 PLA2G7Q13093 441 aa16.14■□□□□ 0.17
COL9A3-207ENST00000467819 TRAM1Q15629 374 aa16.14■□□□□ 0.17
COL9A3-207ENST00000467819 C2orf76Q3KRA6 126 aa16.14■□□□□ 0.17
COL9A3-207ENST00000467819 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.14■□□□□ 0.17
COL9A3-207ENST00000467819 OR4A4PQ8NGN8 299 aa16.14■□□□□ 0.17
COL9A3-207ENST00000467819 TPRKBQ9Y3C4 175 aa16.14■□□□□ 0.17
COL9A3-207ENST00000467819 H3BUA1 57 aa16.13■□□□□ 0.17
COL9A3-207ENST00000467819 FABP7O15540 132 aa16.13■□□□□ 0.17
COL9A3-207ENST00000467819 IGLV2-23P01705 113 aa16.13■□□□□ 0.17
COL9A3-207ENST00000467819 LYL1P12980 280 aa16.13■□□□□ 0.17
COL9A3-207ENST00000467819 MRPS15P82914 257 aaKnown RBP16.13■□□□□ 0.17
COL9A3-207ENST00000467819 IGSF11Q5DX21 431 aa16.13■□□□□ 0.17
COL9A3-207ENST00000467819 HES5Q5TA89 166 aa16.13■□□□□ 0.17
COL9A3-207ENST00000467819 Q8N1Y9 231 aa16.13■□□□□ 0.17
COL9A3-207ENST00000467819 HARBI1Q96MB7 349 aa16.13■□□□□ 0.17
COL9A3-207ENST00000467819 CCDC90BQ9GZT6 254 aa16.13■□□□□ 0.17
COL9A3-207ENST00000467819 PALMDQ9NP74 551 aa16.13■□□□□ 0.17
COL9A3-207ENST00000467819 RYR2Q92736 4967 aa16.13■□□□□ 0.17
COL9A3-207ENST00000467819 A0A0G2JLM5 398 aa16.12■□□□□ 0.17
COL9A3-207ENST00000467819 TMEM272A0A1B0GTI8 110 aa16.12■□□□□ 0.17
COL9A3-207ENST00000467819 ANKRD65E5RJM6 399 aa16.12■□□□□ 0.17
COL9A3-207ENST00000467819 RGS10O43665 173 aa16.12■□□□□ 0.17
COL9A3-207ENST00000467819 PSMA1P25786 263 aaKnown RBP16.12■□□□□ 0.17
COL9A3-207ENST00000467819 SERPINB10P48595 397 aa16.12■□□□□ 0.17
COL9A3-207ENST00000467819 AQP4P55087 323 aa16.12■□□□□ 0.17
COL9A3-207ENST00000467819 FABP5Q01469 135 aa16.12■□□□□ 0.17
COL9A3-207ENST00000467819 MLLT11Q13015 90 aaPredicted RBP16.12■□□□□ 0.17
COL9A3-207ENST00000467819 SGPP2Q8IWX5 399 aa16.12■□□□□ 0.17
COL9A3-207ENST00000467819 TM2D3Q9BRN9 247 aa16.12■□□□□ 0.17
COL9A3-207ENST00000467819 SDHAF2Q9NX18 166 aa16.12■□□□□ 0.17
COL9A3-207ENST00000467819 V9GY05 133 aa16.12■□□□□ 0.17
COL9A3-207ENST00000467819 LDLRAD4O15165 306 aa16.11■□□□□ 0.17
COL9A3-207ENST00000467819 CRYGBP07316 175 aa16.11■□□□□ 0.17
COL9A3-207ENST00000467819 FCGR3AP08637 254 aa16.11■□□□□ 0.17
COL9A3-207ENST00000467819 GSTT2P0CG29 244 aa16.11■□□□□ 0.17
COL9A3-207ENST00000467819 GSTT2BP0CG30 244 aa16.11■□□□□ 0.17
COL9A3-207ENST00000467819 LGALS7P47929 136 aa16.11■□□□□ 0.17
COL9A3-207ENST00000467819 CBX3Q13185 183 aa16.11■□□□□ 0.17
COL9A3-207ENST00000467819 MOGAT2Q3SYC2 334 aa16.11■□□□□ 0.17
COL9A3-207ENST00000467819 BVESQ8NE79 360 aa16.11■□□□□ 0.17
COL9A3-207ENST00000467819 OR10J5Q8NHC4 309 aa16.11■□□□□ 0.17
COL9A3-207ENST00000467819 MAFIPQ8WZ33 124 aa16.11■□□□□ 0.17
COL9A3-207ENST00000467819 RAB3CQ96E17 227 aa16.11■□□□□ 0.17
COL9A3-207ENST00000467819 C5orf30Q96GV9 206 aa16.11■□□□□ 0.17
COL9A3-207ENST00000467819 CITED4Q96RK1 184 aa16.11■□□□□ 0.17
COL9A3-207ENST00000467819 CABLES2Q9BTV7 478 aa16.11■□□□□ 0.17
COL9A3-207ENST00000467819 DUSP21Q9H596 190 aa16.11■□□□□ 0.17
COL9A3-207ENST00000467819 NKX1-2Q9UD57 310 aaPredicted RBP16.11■□□□□ 0.17
COL9A3-207ENST00000467819 KCNK7Q9Y2U2 307 aa16.11■□□□□ 0.17
COL9A3-207ENST00000467819 CSMD3Q7Z407 3707 aa16.1■□□□□ 0.17
COL9A3-207ENST00000467819 SHOXO15266 292 aa16.1■□□□□ 0.17
COL9A3-207ENST00000467819 APELAP0DMC3 54 aa16.1■□□□□ 0.17
COL9A3-207ENST00000467819 SYNJ2BPP57105 145 aa16.1■□□□□ 0.17
COL9A3-207ENST00000467819 OR9G4Q8NGQ1 327 aa16.1■□□□□ 0.17
COL9A3-207ENST00000467819 GAR1Q9NY12 217 aaKnown RBP16.1■□□□□ 0.17
COL9A3-207ENST00000467819 COA4Q9NYJ1 87 aa16.1■□□□□ 0.17
COL9A3-207ENST00000467819 RAB22AQ9UL26 194 aa16.1■□□□□ 0.17
COL9A3-207ENST00000467819 RBM7Q9Y580 266 aaKnown RBP16.1■□□□□ 0.17
COL9A3-207ENST00000467819 A0A075B6Q4 140 aa16.09■□□□□ 0.17
COL9A3-207ENST00000467819 MAP2K4P45985 399 aa16.09■□□□□ 0.17
COL9A3-207ENST00000467819 KLF5Q13887 457 aaPredicted RBP16.09■□□□□ 0.17
COL9A3-207ENST00000467819 RTL8BQ17RB0 113 aa16.09■□□□□ 0.17
COL9A3-207ENST00000467819 ZFAND6Q6FIF0 208 aa16.09■□□□□ 0.17
COL9A3-207ENST00000467819 PHB2Q99623 299 aa16.09■□□□□ 0.17
COL9A3-207ENST00000467819 MGLLQ99685 303 aa16.09■□□□□ 0.17
COL9A3-207ENST00000467819 TINAGL1Q9GZM7 467 aaPredicted RBP16.09■□□□□ 0.17
COL9A3-207ENST00000467819 C19orf73Q9NVV2 129 aa16.09■□□□□ 0.17
COL9A3-207ENST00000467819 ZNF230Q9UIE0 474 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms