RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 HLA-DMBP28068 263 aa7.47□□□□□ -1.21
HDAC3-203ENST00000467533 FAM106AQ4KMX7 169 aa7.47□□□□□ -1.21
HDAC3-203ENST00000467533 SLC22A6Q4U2R8 563 aa7.47□□□□□ -1.21
HDAC3-203ENST00000467533 Q6ZR54 194 aa7.47□□□□□ -1.21
HDAC3-203ENST00000467533 ZNF554Q86TJ5 538 aa7.47□□□□□ -1.21
HDAC3-203ENST00000467533 DHFR2Q86XF0 187 aa7.47□□□□□ -1.21
HDAC3-203ENST00000467533 DEFB107AQ8IZN7 70 aa7.47□□□□□ -1.21
HDAC3-203ENST00000467533 NECAP1Q8NC96 275 aa7.47□□□□□ -1.21
HDAC3-203ENST00000467533 NSL1Q96IY1 281 aa7.47□□□□□ -1.21
HDAC3-203ENST00000467533 CCDC140Q96MF4 163 aa7.47□□□□□ -1.21
HDAC3-203ENST00000467533 JAM3Q9BX67 310 aa7.47□□□□□ -1.21
HDAC3-203ENST00000467533 HRH4Q9H3N8 390 aa7.47□□□□□ -1.21
HDAC3-203ENST00000467533 ARL8BQ9NVJ2 186 aa7.47□□□□□ -1.21
HDAC3-203ENST00000467533 TAS2R4Q9NYW5 299 aa7.47□□□□□ -1.21
HDAC3-203ENST00000467533 EXOSC1Q9Y3B2 195 aaKnown RBP7.47□□□□□ -1.21
HDAC3-203ENST00000467533 DMRT1Q9Y5R6 373 aa7.47□□□□□ -1.21
HDAC3-203ENST00000467533 UBR4Q5T4S7 5183 aa7.47□□□□□ -1.21
HDAC3-203ENST00000467533 TRBV9A0A0B4J1U6 114 aa7.46□□□□□ -1.22
HDAC3-203ENST00000467533 ZNF780AO75290 641 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-203ENST00000467533 CA11O75493 328 aa7.46□□□□□ -1.22
HDAC3-203ENST00000467533 IGHV3-23P01764 117 aa7.46□□□□□ -1.22
HDAC3-203ENST00000467533 ZNF93P35789 620 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-203ENST00000467533 TNP2Q05952 138 aa7.46□□□□□ -1.22
HDAC3-203ENST00000467533 TNXAQ16473 311 aa7.46□□□□□ -1.22
HDAC3-203ENST00000467533 ZNF585BQ52M93 769 aa7.46□□□□□ -1.22
HDAC3-203ENST00000467533 DDI2Q5TDH0 399 aa7.46□□□□□ -1.22
HDAC3-203ENST00000467533 Q6ZRM9 215 aa7.46□□□□□ -1.22
HDAC3-203ENST00000467533 OR13C5Q8NGS8 318 aa7.46□□□□□ -1.22
HDAC3-203ENST00000467533 MRPL30Q8TCC3 161 aaKnown RBP7.46□□□□□ -1.22
HDAC3-203ENST00000467533 DNAJC9Q8WXX5 260 aa7.46□□□□□ -1.22
HDAC3-203ENST00000467533 MARC2Q969Z3 335 aa7.46□□□□□ -1.22
HDAC3-203ENST00000467533 NDUFAF3Q9BU61 184 aa7.46□□□□□ -1.22
HDAC3-203ENST00000467533 ABRACLQ9P1F3 81 aa7.46□□□□□ -1.22
HDAC3-203ENST00000467533 LRP1BQ9NZR2 4599 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 J3QLW9 94 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 SLC16A6O15403 523 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 GPX5O75715 221 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 SC5DO75845 299 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 CA1P00915 261 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-203ENST00000467533 IGLV2-23P01705 113 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 ZNF19P17023 458 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 ADMP35318 185 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 SOX2P48431 317 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 LINC00205P59089 165 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 EFNB1P98172 346 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 MED21Q13503 144 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 GLT8D1Q68CQ7 371 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 C12orf73Q69YU5 71 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 CLEC19AQ6UXS0 136 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 APRG1Q8IVJ8 170 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 ZNF383Q8NA42 475 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 SRSF12Q8WXF0 261 aaKnown RBP7.45□□□□□ -1.22
HDAC3-203ENST00000467533 CYYR1Q96J86 154 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 HARBI1Q96MB7 349 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 SLC35D1Q9NTN3 355 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 ZNF446Q9NWS9 450 aa7.45□□□□□ -1.22
HDAC3-203ENST00000467533 DAPL1A0PJW8 107 aa7.44□□□□□ -1.22
HDAC3-203ENST00000467533 OR4C46A6NHA9 309 aa7.44□□□□□ -1.22
HDAC3-203ENST00000467533 TSPAN4O14817 238 aa7.44□□□□□ -1.22
HDAC3-203ENST00000467533 IFNA21P01568 189 aa7.44□□□□□ -1.22
HDAC3-203ENST00000467533 IFNA17P01571 189 aa7.44□□□□□ -1.22
HDAC3-203ENST00000467533 CRYGBP07316 175 aa7.44□□□□□ -1.22
HDAC3-203ENST00000467533 TMEM187Q14656 261 aa7.44□□□□□ -1.22
HDAC3-203ENST00000467533 HMGN3Q15651 99 aa7.44□□□□□ -1.22
HDAC3-203ENST00000467533 ZNF124Q15973 351 aa7.44□□□□□ -1.22
HDAC3-203ENST00000467533 ZNF529Q6P280 563 aa7.44□□□□□ -1.22
HDAC3-203ENST00000467533 SETD9Q8NE22 299 aa7.44□□□□□ -1.22
HDAC3-203ENST00000467533 ACOT12Q8WYK0 555 aa7.44□□□□□ -1.22
HDAC3-203ENST00000467533 C4orf36Q96KX1 117 aa7.44□□□□□ -1.22
HDAC3-203ENST00000467533 C18orf15Q96N68 181 aa7.44□□□□□ -1.22
HDAC3-203ENST00000467533 C5orf66Q9H5L9 145 aa7.44□□□□□ -1.22
HDAC3-203ENST00000467533 MRPL27Q9P0M9 148 aaKnown RBP7.44□□□□□ -1.22
HDAC3-203ENST00000467533 RPL36Q9Y3U8 105 aaKnown RBP7.44□□□□□ -1.22
HDAC3-203ENST00000467533 LRRC42Q9Y546 428 aa7.44□□□□□ -1.22
HDAC3-203ENST00000467533 S4R3C0 116 aa7.44□□□□□ -1.22
HDAC3-203ENST00000467533 DEFB131BA0A096LNP1 70 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 IGHV4-28A0A0C4DH34 117 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 FAM90A7PA6NKC0 464 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 TMEM212A6NML5 194 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 ZAR1LA6NP61 321 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 BAG2O95816 211 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 RPSAP08865 295 aaKnown RBP7.43□□□□□ -1.22
HDAC3-203ENST00000467533 C8orf88P0DMB2 117 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 CAPGP40121 348 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 PPP3R1P63098 170 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 CBX3Q13185 183 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 GPR176Q14439 515 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 LAMTOR1Q6IAA8 161 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 UNQ9165/PRO28630Q6UXU0 137 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 Q8NAQ8 132 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 OR5AK2Q8NH90 309 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 EDARADDQ8WWZ3 215 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 PDCD1LG2Q9BQ51 273 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 CHRDL1Q9BU40 450 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 ISG20L2Q9H9L3 353 aaKnown RBP7.43□□□□□ -1.22
HDAC3-203ENST00000467533 UFC1Q9Y3C8 167 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 GMPPBQ9Y5P6 360 aa7.43□□□□□ -1.22
HDAC3-203ENST00000467533 M0R1X1 148 aa7.42□□□□□ -1.22
HDAC3-203ENST00000467533 CD2P06729 351 aa7.42□□□□□ -1.22
HDAC3-203ENST00000467533 GSTT2P0CG29 244 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms