RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 ZFHX4Q86UP3 3567 aa12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 LRRC30A6NM36 301 aa12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 TMEM250H0YL14 139 aa12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 PSPNO60542 156 aa12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 NDUFS6O75380 124 aaKnown RBP12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 FABP4P15090 132 aa12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 HOXC12P31275 282 aa12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 BRWD1-AS2P59051 145 aa12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 PPP1CBP62140 327 aa12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 RPL30P62888 115 aaKnown RBP12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 FOXF2Q12947 444 aa12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 ATP6V1FQ16864 119 aa12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 ALKBH6Q3KRA9 238 aa12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 NCR3LG1Q68D85 454 aa12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 OR4X1Q8NH49 305 aa12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 OR1L1Q8NH94 360 aa12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 HIST1H2BLQ99880 126 aa12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 SRD5A3Q9H8P0 318 aa12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 HES4Q9HCC6 221 aa12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 PLSCR4Q9NRQ2 329 aa12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 PRRC2CQ9Y520 2896 aaKnown RBP12.33□□□□□ -0.44
PRPF38B-204ENST00000467302 CTXND1A0A1B0GTU2 59 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 KRASP01116 189 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 G6PCP35575 357 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 ERVS71-1P61550 626 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 MSMO1Q15800 293 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 ADIRFQ15847 76 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 C16orf82Q7Z2V1 217 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 SNX22Q96L94 193 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 TMEM147Q9BVK8 224 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 MRPL37Q9BZE1 423 aaKnown RBP12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 GFOD1Q9NXC2 390 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 DKK4Q9UBT3 224 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 ASPMQ8IZT6 3477 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 MBD3L4A6NDZ8 208 aaPredicted RBP12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 MBD3L3A6NE82 208 aaPredicted RBP12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 MBD3L5A6NJ08 208 aaPredicted RBP12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 C12orf77C9JDV5 145 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 HAND1O96004 215 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 CRYABP02511 175 aaKnown RBP12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 PSMB3P49720 205 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 RPL23P62829 140 aaKnown RBP12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 FAM180AQ6UWF9 173 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 RBMXL3Q8N7X1 1067 aaKnown RBP12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 OR51G1Q8NGK1 321 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 MBD3L2Q8NHZ7 208 aaPredicted RBP12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 GALMQ96C23 342 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 OR2D2Q9H210 308 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 SLC25A22Q9H936 323 aa12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.32□□□□□ -0.44
PRPF38B-204ENST00000467302 KIAA2026Q5HYC2 2103 aa12.31□□□□□ -0.44
PRPF38B-204ENST00000467302 IGHV3-64DA0A0J9YX35 117 aa12.31□□□□□ -0.44
PRPF38B-204ENST00000467302 TMEM30CPA0ZSE6 113 aa12.31□□□□□ -0.44
PRPF38B-204ENST00000467302 ODAMA1E959 279 aa12.31□□□□□ -0.44
PRPF38B-204ENST00000467302 IQCF6A8MYZ5 107 aa12.31□□□□□ -0.44
PRPF38B-204ENST00000467302 MBP02144 154 aa12.31□□□□□ -0.44
PRPF38B-204ENST00000467302 RAC2P15153 192 aa12.31□□□□□ -0.44
PRPF38B-204ENST00000467302 MDKP21741 143 aaPredicted RBP12.31□□□□□ -0.44
PRPF38B-204ENST00000467302 GPX4P36969 197 aaPredicted RBP12.31□□□□□ -0.44
PRPF38B-204ENST00000467302 OR3A1P47881 315 aa12.31□□□□□ -0.44
PRPF38B-204ENST00000467302 CEBPDP49716 269 aaPredicted RBP12.31□□□□□ -0.44
PRPF38B-204ENST00000467302 FOXC1Q12948 553 aa12.31□□□□□ -0.44
PRPF38B-204ENST00000467302 BSXQ3C1V8 233 aa12.31□□□□□ -0.44
PRPF38B-204ENST00000467302 FAM53AQ6NSI3 398 aaPredicted RBP12.31□□□□□ -0.44
PRPF38B-204ENST00000467302 PACRGQ96M98 296 aaPredicted RBP12.31□□□□□ -0.44
PRPF38B-204ENST00000467302 KCNIP1Q9NZI2 227 aa12.31□□□□□ -0.44
PRPF38B-204ENST00000467302 CLN8Q9UBY8 286 aa12.31□□□□□ -0.44
PRPF38B-204ENST00000467302 PROCRQ9UNN8 238 aa12.31□□□□□ -0.44
PRPF38B-204ENST00000467302 USF3Q68DE3 2245 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 MKRN2OSH3BPM6 223 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 S1PR2O95136 353 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 ZNF816Q0VGE8 651 aaPredicted RBP12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 GAMTQ14353 236 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 VWC2Q2TAL6 325 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 TGIF2LYQ8IUE0 185 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 TMEM183AQ8IXX5 376 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 WDR31Q8NA23 367 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 OR52L2PQ8NGH6 319 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 OR10G9Q8NGN4 311 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 OR10G7Q8NGN6 311 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 RPUSD4Q96CM3 377 aaKnown RBP12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 PARLQ9H300 379 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 MANBALQ9NQG1 85 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 CFAP47Q6ZTR5 3102 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 TMEM210A6NLX4 147 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 HMGB3O15347 200 aaKnown RBP12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 TNFSF13O75888 250 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 AGFG2O95081 481 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 SELEP16581 610 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 GZMHP20718 246 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 FGF7P21781 194 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 DEFA6Q01524 100 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 PSG7Q13046 419 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 HNF4GQ14541 408 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 SLC35E4Q6ICL7 350 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 SLC25A40Q8TBP6 338 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 GATAD1Q8WUU5 269 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 STARD4Q96DR4 205 aa12.3□□□□□ -0.44
PRPF38B-204ENST00000467302 OOEPA6NGQ2 149 aa12.29□□□□□ -0.44
PRPF38B-204ENST00000467302 C17orf98A8MV24 154 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms