RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 H7BYZ3 331 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.57□□□□□ -2
VPS13D-203ENST00000466732 PANO1I0J062 215 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 J3QLI3 93 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 J3QR89 54 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 HMGB3O15347 200 aaKnown RBP2.57□□□□□ -2
VPS13D-203ENST00000466732 EIF4E2O60573 245 aaKnown RBP2.57□□□□□ -2
VPS13D-203ENST00000466732 FCN3O75636 299 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 OR2A4O95047 310 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 NRASP01111 189 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 SEMG1P04279 462 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 CTSDP07339 412 aaPredicted RBP2.57□□□□□ -2
VPS13D-203ENST00000466732 IGHV1-2P23083 117 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 SDC2P34741 201 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 SNCAP37840 140 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 KIR2DS4P43632 304 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 ZNF133P52736 654 aaPredicted RBP2.57□□□□□ -2
VPS13D-203ENST00000466732 TCL1AP56279 114 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 RPL8P62917 257 aaKnown RBP2.57□□□□□ -2
VPS13D-203ENST00000466732 CRADDP78560 199 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 H3F3AP84243 136 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 PRDX4Q13162 271 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 DHRS2Q13268 280 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 ZNF266Q14584 549 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 KIR2DS1Q14954 304 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 ZNF77Q15935 545 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 TMEM183BQ1AE95 376 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 LRRC10Q5BKY1 277 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 FAM162BQ5T6X4 162 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 LAIR2Q6ISS4 152 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 LCN8Q6JVE9 175 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 NIPAL3Q6P499 406 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 C19orf35Q6ZS72 473 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 GKN2Q86XP6 184 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 LRRC25Q8N386 305 aaPredicted RBP2.57□□□□□ -2
VPS13D-203ENST00000466732 PNKDQ8N490 385 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 FAM24BQ8N5W8 94 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 ZNF439Q8NDP4 499 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 PLPP5Q8NEB5 264 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 OR5B3Q8NH48 314 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 C15orf40Q8WUR7 153 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 DLX4Q92988 240 aaPredicted RBP2.57□□□□□ -2
VPS13D-203ENST00000466732 TSLPQ969D9 159 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 FGGYQ96C11 551 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 C8orf44Q96CB5 159 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 DIRAS2Q96HU8 199 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 IMMP1LQ96LU5 166 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 KCTD7Q96MP8 289 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 OXGR1Q96P68 337 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 OR2A7Q96R45 310 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 PEBP4Q96S96 227 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 PITX2Q99697 317 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 NDFIP1Q9BT67 221 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 DOHHQ9BU89 302 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 OR11A1Q9GZK7 315 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 MAP1LC3BQ9GZQ8 125 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 RNF167Q9H6Y7 350 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 EXOSC4Q9NPD3 245 aaKnown RBP2.57□□□□□ -2
VPS13D-203ENST00000466732 STARD5Q9NSY2 213 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 FKBP11Q9NYL4 201 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 TAS2R8Q9NYW2 309 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 PIPOXQ9P0Z9 390 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 OR1A1Q9P1Q5 309 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 UQCR10Q9UDW1 63 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 SLC23A2Q9UGH3 650 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 CACFD1Q9UGQ2 172 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 NAT8BQ9UHF3 227 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 MCTS1Q9ULC4 181 aaKnown RBP2.57□□□□□ -2
VPS13D-203ENST00000466732 BOKQ9UMX3 212 aaPredicted RBP2.57□□□□□ -2
VPS13D-203ENST00000466732 B9D1Q9UPM9 204 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 LAMTOR2Q9Y2Q5 125 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 MRPS16Q9Y3D3 137 aaKnown RBP2.57□□□□□ -2
VPS13D-203ENST00000466732 WSB1Q9Y6I7 421 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 ENPP4Q9Y6X5 453 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 DIP2BQ9P265 1576 aa2.57□□□□□ -2
VPS13D-203ENST00000466732 STRCQ7RTU9 1775 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 DLEC1Q9Y238 1755 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 ANK1P16157 1881 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 TICRRQ7Z2Z1 1910 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 BORCS7-ASMTA0A0B4J1R7 106 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 A0A0G2JMM0 328 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 CENPVL3A0A0U1RRI6 287 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 SPAARA0A1B0GVQ0 90 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 A0A1W2PPB8 328 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 LRP5LA4QPB2 252 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 TMEM235A6NFC5 223 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 FAM183AA6NL82 134 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 KIR3DP1A8MWS1 328 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 DCTN6O00399 190 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 ZNF207O43670 478 aaKnown RBP2.56□□□□□ -2
VPS13D-203ENST00000466732 OR1F1O43749 312 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 MPZL2O60487 215 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 SLC16A7O60669 478 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 CNMDO75829 334 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 CDRT1O95170 752 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 KLF8O95600 359 aaPredicted RBP2.56□□□□□ -2
VPS13D-203ENST00000466732 CD160O95971 181 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 IGLV1-47P01700 117 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 IGHV3-23P01764 117 aa2.56□□□□□ -2
VPS13D-203ENST00000466732 MAS1P04201 325 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms