RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 PET100P0DJ07 73 aa1.37□□□□□ -2.19
LRCH3-211ENST00000466054 TAS2R30P59541 319 aa1.37□□□□□ -2.19
LRCH3-211ENST00000466054 EBPQ15125 230 aaKnown RBP1.37□□□□□ -2.19
LRCH3-211ENST00000466054 SDHAF4Q5VUM1 108 aa1.37□□□□□ -2.19
LRCH3-211ENST00000466054 C10orf126Q8N4M7 172 aa1.37□□□□□ -2.19
LRCH3-211ENST00000466054 OR5J2Q8NH18 312 aa1.37□□□□□ -2.19
LRCH3-211ENST00000466054 CLDND2Q8NHS1 167 aa1.37□□□□□ -2.19
LRCH3-211ENST00000466054 SLC35G5Q96KT7 338 aa1.37□□□□□ -2.19
LRCH3-211ENST00000466054 TIMM21Q9BVV7 248 aa1.37□□□□□ -2.19
LRCH3-211ENST00000466054 NDEL1Q9GZM8 345 aa1.37□□□□□ -2.19
LRCH3-211ENST00000466054 SPANXB1Q9NS25 103 aaPredicted RBP1.37□□□□□ -2.19
LRCH3-211ENST00000466054 KLK5Q9Y337 293 aaPredicted RBP1.37□□□□□ -2.19
LRCH3-211ENST00000466054 SCN9AQ15858 1988 aa1.36□□□□□ -2.19
LRCH3-211ENST00000466054 TRGV5A0A0B4J1U4 118 aa1.36□□□□□ -2.19
LRCH3-211ENST00000466054 MT-CO2P00403 227 aa1.36□□□□□ -2.19
LRCH3-211ENST00000466054 NPYP01303 97 aa1.36□□□□□ -2.19
LRCH3-211ENST00000466054 PEBP1P30086 187 aaKnown RBP1.36□□□□□ -2.19
LRCH3-211ENST00000466054 CD79BP40259 229 aa1.36□□□□□ -2.19
LRCH3-211ENST00000466054 RAP1GDS1P52306 607 aa1.36□□□□□ -2.19
LRCH3-211ENST00000466054 RBM11P57052 281 aaKnown RBP1.36□□□□□ -2.19
LRCH3-211ENST00000466054 HPCAP84074 193 aa1.36□□□□□ -2.19
LRCH3-211ENST00000466054 ERHP84090 104 aaKnown RBP1.36□□□□□ -2.19
LRCH3-211ENST00000466054 TMEM31Q5JXX7 168 aa1.36□□□□□ -2.19
LRCH3-211ENST00000466054 DNM1P34Q6PK57 102 aa1.36□□□□□ -2.19
LRCH3-211ENST00000466054 OR7G1Q8NGA0 311 aa1.36□□□□□ -2.19
LRCH3-211ENST00000466054 ZNF563Q8TA94 476 aa1.36□□□□□ -2.19
LRCH3-211ENST00000466054 SMCR5Q8TEV8 140 aa1.36□□□□□ -2.19
LRCH3-211ENST00000466054 ATP6V1G3Q96LB4 118 aa1.36□□□□□ -2.19
LRCH3-211ENST00000466054 SLC22A4Q9H015 551 aa1.36□□□□□ -2.19
LRCH3-211ENST00000466054 TMEM222Q9H0R3 208 aa1.36□□□□□ -2.19
LRCH3-211ENST00000466054 ZNF532Q9HCE3 1301 aa1.36□□□□□ -2.19
LRCH3-211ENST00000466054 A0A1W2PP64 1363 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 TRAV41A0A0B4J266 112 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 A0A1W2PQD3 144 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 GOLGA6L10A6NI86 522 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 M0R381 172 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 HIST1H1CP16403 213 aaKnown RBP1.35□□□□□ -2.19
LRCH3-211ENST00000466054 HOXC5Q00444 222 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 FABP5Q01469 135 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 GNA12Q03113 381 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 Q6ZRN7 208 aaPredicted RBP1.35□□□□□ -2.19
LRCH3-211ENST00000466054 BAP18Q8IXM2 172 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 C1orf174Q8IYL3 243 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 LRRC34Q8IZ02 419 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 RPS4Y2Q8TD47 263 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 CFAP53Q96M91 514 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 PACRGQ96M98 296 aaPredicted RBP1.35□□□□□ -2.19
LRCH3-211ENST00000466054 WDR54Q9H977 334 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 SPACA1Q9HBV2 294 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 NRBP2Q9NSY0 501 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 HDGFL3Q9Y3E1 203 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 AMMECR1Q9Y4X0 333 aaPredicted RBP1.35□□□□□ -2.19
LRCH3-211ENST00000466054 GMEB1Q9Y692 573 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 CHD5Q8TDI0 1954 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 RAD50Q92878 1312 aa1.35□□□□□ -2.19
LRCH3-211ENST00000466054 MDFIC2A0A1B0GVS7 189 aa1.34□□□□□ -2.19
LRCH3-211ENST00000466054 IGKV2-29A2NJV5 120 aaPredicted RBP1.34□□□□□ -2.19
LRCH3-211ENST00000466054 BHLHE40O14503 412 aa1.34□□□□□ -2.19
LRCH3-211ENST00000466054 AZIN1O14977 448 aa1.34□□□□□ -2.19
LRCH3-211ENST00000466054 ADAP1O75689 374 aa1.34□□□□□ -2.19
LRCH3-211ENST00000466054 OCMP0CE72 109 aaPredicted RBP1.34□□□□□ -2.19
LRCH3-211ENST00000466054 ARL14EPLP0DKL9 152 aa1.34□□□□□ -2.19
LRCH3-211ENST00000466054 PSMB6P28072 239 aa1.34□□□□□ -2.19
LRCH3-211ENST00000466054 RPL27AP46776 148 aaKnown RBP1.34□□□□□ -2.19
LRCH3-211ENST00000466054 TMEM33P57088 247 aa1.34□□□□□ -2.19
LRCH3-211ENST00000466054 GNA13Q14344 377 aa1.34□□□□□ -2.19
LRCH3-211ENST00000466054 LGALS9BQ3B8N2 356 aa1.34□□□□□ -2.19
LRCH3-211ENST00000466054 FAM201AQ5SY85 155 aa1.34□□□□□ -2.19
LRCH3-211ENST00000466054 DRAM2Q6UX65 266 aa1.34□□□□□ -2.19
LRCH3-211ENST00000466054 SLC35E3Q7Z769 313 aa1.34□□□□□ -2.19
LRCH3-211ENST00000466054 CD302Q8IX05 232 aa1.34□□□□□ -2.19
LRCH3-211ENST00000466054 RIBC1Q8N443 379 aaPredicted RBP1.34□□□□□ -2.19
LRCH3-211ENST00000466054 DAND5Q8N907 189 aa1.34□□□□□ -2.19
LRCH3-211ENST00000466054 SLC37A2Q8TED4 501 aa1.34□□□□□ -2.19
LRCH3-211ENST00000466054 DCUN1D5Q9BTE7 237 aa1.34□□□□□ -2.19
LRCH3-211ENST00000466054 DOK5Q9P104 306 aa1.34□□□□□ -2.19
LRCH3-211ENST00000466054 HHLA3Q9XRX5 114 aa1.34□□□□□ -2.19
LRCH3-211ENST00000466054 PCYT1BQ9Y5K3 369 aaPredicted RBP1.34□□□□□ -2.19
LRCH3-211ENST00000466054 RGS12O14924 1447 aa1.33□□□□□ -2.2
LRCH3-211ENST00000466054 GRIN2BQ13224 1484 aa1.33□□□□□ -2.2
LRCH3-211ENST00000466054 TRGV2A0A075B6R0 118 aa1.33□□□□□ -2.2
LRCH3-211ENST00000466054 C5orf49A4QMS7 147 aa1.33□□□□□ -2.2
LRCH3-211ENST00000466054 OR6C6A6NF89 314 aa1.33□□□□□ -2.2
LRCH3-211ENST00000466054 CALUO43852 315 aaPredicted RBP1.33□□□□□ -2.2
LRCH3-211ENST00000466054 HPGDSO60760 199 aa1.33□□□□□ -2.2
LRCH3-211ENST00000466054 GABRA2P47869 451 aa1.33□□□□□ -2.2
LRCH3-211ENST00000466054 RPL14P50914 215 aaKnown RBP1.33□□□□□ -2.2
LRCH3-211ENST00000466054 IDH3GP51553 393 aaPredicted RBP1.33□□□□□ -2.2
LRCH3-211ENST00000466054 CLDN12P56749 244 aa1.33□□□□□ -2.2
LRCH3-211ENST00000466054 MGAT3Q09327 533 aa1.33□□□□□ -2.2
LRCH3-211ENST00000466054 FAM19A5Q7Z5A7 132 aaPredicted RBP1.33□□□□□ -2.2
LRCH3-211ENST00000466054 SPATA12Q7Z6I5 190 aa1.33□□□□□ -2.2
LRCH3-211ENST00000466054 SPACA4Q8TDM5 124 aa1.33□□□□□ -2.2
LRCH3-211ENST00000466054 ASB13Q8WXK3 278 aa1.33□□□□□ -2.2
LRCH3-211ENST00000466054 BBS2Q9BXC9 721 aa1.33□□□□□ -2.2
LRCH3-211ENST00000466054 NSRP1Q9H0G5 558 aaKnown RBP1.33□□□□□ -2.2
LRCH3-211ENST00000466054 BABAM2Q9NXR7 383 aa1.33□□□□□ -2.2
LRCH3-211ENST00000466054 DISP1Q96F81 1524 aa1.33□□□□□ -2.2
LRCH3-211ENST00000466054 PRRC2BQ5JSZ5 2229 aaKnown RBP1.32□□□□□ -2.2
LRCH3-211ENST00000466054 IGHV3-64A0A075B6Q5 118 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms