RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 ARPC1BO15143 372 aaKnown RBP7.42□□□□□ -1.22
USP39-212ENST00000465514 SLC22A1O15245 554 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 SOCS1O15524 211 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 HSPA12AO43301 675 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 PROP1O75360 226 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 CA2P00918 260 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 TRGV3P03979 118 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 IGKV1-16P04430 117 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 TFAP2AP05549 437 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 CPEP16870 476 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 SRMP19623 302 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 ZBTB25P24278 435 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 LINC00205P59089 165 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 RPS16P62249 146 aaKnown RBP7.42□□□□□ -1.22
USP39-212ENST00000465514 QRFPP83859 136 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 ANKRD13BQ86YJ7 626 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 C8orf59Q8N0T1 100 aaPredicted RBP7.42□□□□□ -1.22
USP39-212ENST00000465514 MS4A15Q8N5U1 240 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 GRPEL2Q8TAA5 225 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 EDARADDQ8WWZ3 215 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 TSNAXQ99598 290 aaKnown RBP7.42□□□□□ -1.22
USP39-212ENST00000465514 HDHD3Q9BSH5 251 aaPredicted RBP7.42□□□□□ -1.22
USP39-212ENST00000465514 TMED9Q9BVK6 235 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 RIMS4Q9H426 269 aaPredicted RBP7.42□□□□□ -1.22
USP39-212ENST00000465514 SLA2Q9H6Q3 261 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 C8orf4Q9NR00 106 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 ZNF355PQ9NSJ1 428 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 AK3Q9UIJ7 227 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 STUB1Q9UNE7 303 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 DNAH6Q9C0G6 4158 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 C13orf42A0A1B0GVH6 325 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 ANKRD34BA5PLL1 514 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 BPNT1O95861 308 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 IGLV1-51P01701 117 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 SCTP09683 121 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 CD37P11049 281 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 ARSBP15848 533 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 HLA-DRB3P79483 266 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 FXYD3Q14802 87 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 HSD17B12Q53GQ0 312 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 CEACAM19Q7Z692 300 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 LINC00528Q8N1L1 170 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 ZNF383Q8NA42 475 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 OR5T1Q8NG75 326 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 FBLIM1Q8WUP2 373 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 PTX4Q96A99 478 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 RSRP1Q9BUV0 290 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 LPAR5Q9H1C0 372 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 HIPK2Q9H2X6 1198 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 RANGRFQ9HD47 186 aaPredicted RBP7.41□□□□□ -1.22
USP39-212ENST00000465514 FKBP14Q9NWM8 211 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 ZNF221Q9UK13 617 aa7.41□□□□□ -1.22
USP39-212ENST00000465514 FAT2Q9NYQ8 4349 aa7.4□□□□□ -1.22
USP39-212ENST00000465514 CXorf65A6NEN9 183 aa7.4□□□□□ -1.22
USP39-212ENST00000465514 SPDEFO95238 335 aa7.4□□□□□ -1.22
USP39-212ENST00000465514 CNIH1O95406 144 aa7.4□□□□□ -1.22
USP39-212ENST00000465514 BRI3O95415 125 aa7.4□□□□□ -1.22
USP39-212ENST00000465514 ZP3P21754 424 aa7.4□□□□□ -1.22
USP39-212ENST00000465514 PJVKQ0ZLH3 352 aa7.4□□□□□ -1.22
USP39-212ENST00000465514 PMS2P11Q13670 270 aa7.4□□□□□ -1.22
USP39-212ENST00000465514 KLF5Q13887 457 aaPredicted RBP7.4□□□□□ -1.22
USP39-212ENST00000465514 P2RY14Q15391 338 aa7.4□□□□□ -1.22
USP39-212ENST00000465514 PDPNQ86YL7 162 aa7.4□□□□□ -1.22
USP39-212ENST00000465514 FAM89BQ8N5H3 189 aa7.4□□□□□ -1.22
USP39-212ENST00000465514 POC5Q8NA72 575 aa7.4□□□□□ -1.22
USP39-212ENST00000465514 OR6M1Q8NGM8 313 aa7.4□□□□□ -1.22
USP39-212ENST00000465514 URM1Q9BTM9 101 aaKnown RBP7.4□□□□□ -1.22
USP39-212ENST00000465514 MND1Q9BWT6 205 aa7.4□□□□□ -1.22
USP39-212ENST00000465514 Q9N2K0 584 aa7.4□□□□□ -1.22
USP39-212ENST00000465514 MGAT4AQ9UM21 535 aa7.4□□□□□ -1.22
USP39-212ENST00000465514 IGKV1-6A0A0C4DH72 117 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 A0A0G2JLM5 398 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 FOXI3A8MTJ6 420 aaPredicted RBP7.39□□□□□ -1.23
USP39-212ENST00000465514 PTGES3LE9PB15 166 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 H3BUA1 57 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 M0R1X1 148 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 EBAG9O00559 213 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 APOA2P02652 100 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 CDK1P06493 297 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 UCHL1P09936 223 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 TMEM50BP56557 158 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 SSBP2P81877 361 aaPredicted RBP7.39□□□□□ -1.23
USP39-212ENST00000465514 RCN1Q15293 331 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 SPHARQ15513 63 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 IL34Q6ZMJ4 242 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 ARHGAP5-AS1Q96IT6 56 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 GFI1Q99684 422 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 PECRQ9BY49 303 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 TUBA4BQ9H853 241 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 PLGRKTQ9HBL7 147 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 C12orf4Q9NQ89 552 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 SLC35D1Q9NTN3 355 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 RDH8Q9NYR8 311 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 HSF4Q9ULV5 492 aa7.39□□□□□ -1.23
USP39-212ENST00000465514 LSM2Q9Y333 95 aaKnown RBP7.39□□□□□ -1.23
USP39-212ENST00000465514 NUPR2A6NF83 97 aa7.38□□□□□ -1.23
USP39-212ENST00000465514 TRDCB7Z8K6 153 aa7.38□□□□□ -1.23
USP39-212ENST00000465514 SLC17A2O00624 439 aa7.38□□□□□ -1.23
USP39-212ENST00000465514 IGLV2-23P01705 113 aa7.38□□□□□ -1.23
USP39-212ENST00000465514 CRYGBP07316 175 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms