RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 BVESQ8NE79 360 aa11.15□□□□□ -0.62
HDAC6-214ENST00000465269 OR2K2Q8NGT1 345 aa11.15□□□□□ -0.62
HDAC6-214ENST00000465269 DYNLRB2Q8TF09 96 aa11.15□□□□□ -0.62
HDAC6-214ENST00000465269 DERL3Q96Q80 235 aa11.15□□□□□ -0.62
HDAC6-214ENST00000465269 ABHD14AQ9BUJ0 271 aa11.15□□□□□ -0.62
HDAC6-214ENST00000465269 MRPS26Q9BYN8 205 aaKnown RBP11.15□□□□□ -0.62
HDAC6-214ENST00000465269 NDUFB11Q9NX14 153 aa11.15□□□□□ -0.62
HDAC6-214ENST00000465269 TRAV8-7A0A075B6U6 113 aa11.14□□□□□ -0.63
HDAC6-214ENST00000465269 SAA2-SAA4A0A096LPE2 208 aa11.14□□□□□ -0.63
HDAC6-214ENST00000465269 A0A1W2PP11 408 aa11.14□□□□□ -0.63
HDAC6-214ENST00000465269 SPINT2O43291 252 aa11.14□□□□□ -0.63
HDAC6-214ENST00000465269 SPRY2O43597 315 aa11.14□□□□□ -0.63
HDAC6-214ENST00000465269 OR2A4O95047 310 aa11.14□□□□□ -0.63
HDAC6-214ENST00000465269 SAA2P0DJI9 122 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-214ENST00000465269 CD36P16671 472 aa11.14□□□□□ -0.63
HDAC6-214ENST00000465269 RAB3AP20336 220 aa11.14□□□□□ -0.63
HDAC6-214ENST00000465269 PSMA1P25786 263 aaKnown RBP11.14□□□□□ -0.63
HDAC6-214ENST00000465269 NANOS2P60321 138 aaKnown RBP11.14□□□□□ -0.63
HDAC6-214ENST00000465269 MORN2Q502X0 79 aa11.14□□□□□ -0.63
HDAC6-214ENST00000465269 ZNF833PQ6ZTB9 187 aa11.14□□□□□ -0.63
HDAC6-214ENST00000465269 PXT1Q8NFP0 134 aa11.14□□□□□ -0.63
HDAC6-214ENST00000465269 OR51A2Q8NGJ7 313 aa11.14□□□□□ -0.63
HDAC6-214ENST00000465269 GPER1Q99527 375 aa11.14□□□□□ -0.63
HDAC6-214ENST00000465269 OR2S2Q9NQN1 319 aa11.14□□□□□ -0.63
HDAC6-214ENST00000465269 METTL1Q9UBP6 276 aaKnown RBP11.14□□□□□ -0.63
HDAC6-214ENST00000465269 TRAPPC2LQ9UL33 140 aa11.14□□□□□ -0.63
HDAC6-214ENST00000465269 SULT1B1O43704 296 aa11.13□□□□□ -0.63
HDAC6-214ENST00000465269 SC5DO75845 299 aa11.13□□□□□ -0.63
HDAC6-214ENST00000465269 MAS1P04201 325 aa11.13□□□□□ -0.63
HDAC6-214ENST00000465269 APELAP0DMC3 54 aa11.13□□□□□ -0.63
HDAC6-214ENST00000465269 IGFBP3P17936 291 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-214ENST00000465269 MAPK3P27361 379 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-214ENST00000465269 RBM11P57052 281 aaKnown RBP11.13□□□□□ -0.63
HDAC6-214ENST00000465269 PPP3R1P63098 170 aa11.13□□□□□ -0.63
HDAC6-214ENST00000465269 SSBP2P81877 361 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-214ENST00000465269 TATDN3Q17R31 274 aa11.13□□□□□ -0.63
HDAC6-214ENST00000465269 ZNF343Q6P1L6 599 aa11.13□□□□□ -0.63
HDAC6-214ENST00000465269 LINC00336Q6ZUF6 198 aa11.13□□□□□ -0.63
HDAC6-214ENST00000465269 WFDC3Q8IUB2 231 aa11.13□□□□□ -0.63
HDAC6-214ENST00000465269 CACNG8Q8WXS5 425 aa11.13□□□□□ -0.63
HDAC6-214ENST00000465269 MRPS24Q96EL2 167 aaKnown RBP11.13□□□□□ -0.63
HDAC6-214ENST00000465269 OR51E2Q9H255 320 aa11.13□□□□□ -0.63
HDAC6-214ENST00000465269 FBXL17Q9UF56 701 aa11.13□□□□□ -0.63
HDAC6-214ENST00000465269 ING4Q9UNL4 249 aa11.13□□□□□ -0.63
HDAC6-214ENST00000465269 LRP1BQ9NZR2 4599 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 A0A0G2JLM5 398 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 TRDV1A0A1B0GX56 115 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 PRSS29PA6NIE9 313 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 BMPR1BO00238 502 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 MAGEB3O15480 346 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 GPX5O75715 221 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 SRMP19623 302 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 GADD45AP24522 165 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 BDKRB2P30411 391 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 BMI1P35226 326 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 ZNF45Q02386 682 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 HSD17B12Q53GQ0 312 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 RPL39P5Q59GN2 51 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 ZNF529Q6P280 563 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 ZNF562Q6V9R5 426 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 THRSPQ92748 146 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 ZC4H2Q9NQZ6 224 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 PEMTQ9UBM1 199 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 CKLFQ9UBR5 152 aa11.12□□□□□ -0.63
HDAC6-214ENST00000465269 APOBP04114 4563 aaKnown RBP11.12□□□□□ -0.63
HDAC6-214ENST00000465269 LOC100506127A0A0U1RQW1 187 aa11.11□□□□□ -0.63
HDAC6-214ENST00000465269 GSTP1P09211 210 aaKnown RBP11.11□□□□□ -0.63
HDAC6-214ENST00000465269 UCHL1P09936 223 aa11.11□□□□□ -0.63
HDAC6-214ENST00000465269 CT45A6P0DMU7 189 aa11.11□□□□□ -0.63
HDAC6-214ENST00000465269 CT45A5P0DMU8 189 aa11.11□□□□□ -0.63
HDAC6-214ENST00000465269 CT45A7P0DMV0 189 aa11.11□□□□□ -0.63
HDAC6-214ENST00000465269 FOLR2P14207 255 aa11.11□□□□□ -0.63
HDAC6-214ENST00000465269 CALRP27797 417 aaKnown RBP11.11□□□□□ -0.63
HDAC6-214ENST00000465269 FXYD3Q14802 87 aa11.11□□□□□ -0.63
HDAC6-214ENST00000465269 PSG5Q15238 335 aa11.11□□□□□ -0.63
HDAC6-214ENST00000465269 MOGAT2Q3SYC2 334 aa11.11□□□□□ -0.63
HDAC6-214ENST00000465269 C22orf42Q6IC83 251 aa11.11□□□□□ -0.63
HDAC6-214ENST00000465269 SLC16A13Q7RTY0 426 aa11.11□□□□□ -0.63
HDAC6-214ENST00000465269 YIPF6Q96EC8 236 aa11.11□□□□□ -0.63
HDAC6-214ENST00000465269 IFT22Q9H7X7 185 aa11.11□□□□□ -0.63
HDAC6-214ENST00000465269 TAF9BQ9HBM6 251 aa11.11□□□□□ -0.63
HDAC6-214ENST00000465269 TMEM138Q9NPI0 162 aa11.11□□□□□ -0.63
HDAC6-214ENST00000465269 TXNL4BQ9NX01 149 aaKnown RBP11.11□□□□□ -0.63
HDAC6-214ENST00000465269 SSR3Q9UNL2 185 aa11.11□□□□□ -0.63
HDAC6-214ENST00000465269 DMBT1Q9UGM3 2413 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-214ENST00000465269 H7C2Y5 167 aa11.1□□□□□ -0.63
HDAC6-214ENST00000465269 RTL8CO15255 209 aa11.1□□□□□ -0.63
HDAC6-214ENST00000465269 ST8SIA5O15466 376 aa11.1□□□□□ -0.63
HDAC6-214ENST00000465269 SCAF4O95104 1147 aaKnown RBP11.1□□□□□ -0.63
HDAC6-214ENST00000465269 HLA-AP01891 365 aaKnown RBP11.1□□□□□ -0.63
HDAC6-214ENST00000465269 CTRB1P17538 263 aa11.1□□□□□ -0.63
HDAC6-214ENST00000465269 SERPINA2P20848 420 aa11.1□□□□□ -0.63
HDAC6-214ENST00000465269 KIR2DS2P43631 304 aa11.1□□□□□ -0.63
HDAC6-214ENST00000465269 ALDH3B2P48448 385 aa11.1□□□□□ -0.63
HDAC6-214ENST00000465269 LINC00205P59089 165 aa11.1□□□□□ -0.63
HDAC6-214ENST00000465269 PJVKQ0ZLH3 352 aa11.1□□□□□ -0.63
HDAC6-214ENST00000465269 DDI2Q5TDH0 399 aa11.1□□□□□ -0.63
HDAC6-214ENST00000465269 STEAP3Q658P3 488 aa11.1□□□□□ -0.63
HDAC6-214ENST00000465269 CTRB2Q6GPI1 263 aa11.1□□□□□ -0.63
HDAC6-214ENST00000465269 TMEM61Q8N0U2 210 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms