RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 SOSTQ9BQB4 213 aa10.9□□□□□ -0.66
LIMD1-203ENST00000465039 WNT10AQ9GZT5 417 aa10.9□□□□□ -0.66
LIMD1-203ENST00000465039 EHFQ9NZC4 300 aa10.9□□□□□ -0.66
LIMD1-203ENST00000465039 RNF150Q9ULK6 438 aa10.9□□□□□ -0.66
LIMD1-203ENST00000465039 RBMX2Q9Y388 322 aaKnown RBP10.9□□□□□ -0.66
LIMD1-203ENST00000465039 ZNF736B4DX44 427 aaPredicted RBP10.89□□□□□ -0.67
LIMD1-203ENST00000465039 HLA-DRB1P01911 266 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 TNFSF8P32971 234 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 DUTP33316 252 aaKnown RBP10.89□□□□□ -0.67
LIMD1-203ENST00000465039 HRH1P35367 487 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 ETV6P41212 452 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 VDAC2P45880 294 aaPredicted RBP10.89□□□□□ -0.67
LIMD1-203ENST00000465039 TAS2R19P59542 299 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 HERV-K104P61576 105 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 BLCAPP62952 87 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 MMDQ15546 238 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 ABCA11PQ4W5N1 156 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 FBLN7Q53RD9 439 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 LPCAT3Q6P1A2 487 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 LINC00299Q6ZSB3 139 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 TMEM17Q86X19 198 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 Q8N9W7 124 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 OR6F1Q8NGZ6 308 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 OR52I2Q8NH67 350 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 WIPF2Q8TF74 440 aaPredicted RBP10.89□□□□□ -0.67
LIMD1-203ENST00000465039 DEDD2Q8WXF8 326 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 CITED1Q99966 193 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 DCUN1D5Q9BTE7 237 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 GON7Q9BXV9 100 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 KIAA1456Q9P272 454 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 PRELID3BQ9Y3B1 194 aa10.89□□□□□ -0.67
LIMD1-203ENST00000465039 IGKV1D-13A0A0B4J2D9 117 aa10.88□□□□□ -0.67
LIMD1-203ENST00000465039 DPPA5A6NC42 116 aa10.88□□□□□ -0.67
LIMD1-203ENST00000465039 MEIS3P1A6NDR6 274 aa10.88□□□□□ -0.67
LIMD1-203ENST00000465039 NCBP2LA6PVI3 153 aaKnown RBP10.88□□□□□ -0.67
LIMD1-203ENST00000465039 H7C2Y5 167 aa10.88□□□□□ -0.67
LIMD1-203ENST00000465039 RBFOX2O43251 390 aaKnown RBP eCLIP10.88□□□□□ -0.67
LIMD1-203ENST00000465039 IGLV2-14P01704 120 aa10.88□□□□□ -0.67
LIMD1-203ENST00000465039 CD74P04233 296 aa10.88□□□□□ -0.67
LIMD1-203ENST00000465039 CSF1P09603 554 aa10.88□□□□□ -0.67
LIMD1-203ENST00000465039 IGKV1-13P0DP09 117 aa10.88□□□□□ -0.67
LIMD1-203ENST00000465039 AADACP22760 399 aa10.88□□□□□ -0.67
LIMD1-203ENST00000465039 KIR2DS2P43631 304 aa10.88□□□□□ -0.67
LIMD1-203ENST00000465039 IL18Q14116 193 aa10.88□□□□□ -0.67
LIMD1-203ENST00000465039 HNF4GQ14541 408 aa10.88□□□□□ -0.67
LIMD1-203ENST00000465039 C5orf64Q2M2E5 130 aa10.88□□□□□ -0.67
LIMD1-203ENST00000465039 TMEM177Q53S58 311 aa10.88□□□□□ -0.67
LIMD1-203ENST00000465039 RNASE10Q5GAN6 216 aaKnown RBP10.88□□□□□ -0.67
LIMD1-203ENST00000465039 FOXRED2Q8IWF2 684 aa10.88□□□□□ -0.67
LIMD1-203ENST00000465039 TMEM229BQ8NBD8 167 aa10.88□□□□□ -0.67
LIMD1-203ENST00000465039 OSR1Q8TAX0 266 aaPredicted RBP10.88□□□□□ -0.67
LIMD1-203ENST00000465039 FLYWCH2Q96CP2 140 aaKnown RBP10.88□□□□□ -0.67
LIMD1-203ENST00000465039 RASL11BQ9BPW5 248 aa10.88□□□□□ -0.67
LIMD1-203ENST00000465039 SLC35D1Q9NTN3 355 aa10.88□□□□□ -0.67
LIMD1-203ENST00000465039 FABP12A6NFH5 140 aa10.87□□□□□ -0.67
LIMD1-203ENST00000465039 AP4M1O00189 453 aa10.87□□□□□ -0.67
LIMD1-203ENST00000465039 PEX14O75381 377 aa10.87□□□□□ -0.67
LIMD1-203ENST00000465039 UCP3P55916 312 aa10.87□□□□□ -0.67
LIMD1-203ENST00000465039 CATR1Q13166 79 aa10.87□□□□□ -0.67
LIMD1-203ENST00000465039 EIF4EBP1Q13541 118 aaPredicted RBP10.87□□□□□ -0.67
LIMD1-203ENST00000465039 MEF2DQ14814 521 aa10.87□□□□□ -0.67
LIMD1-203ENST00000465039 ARSJQ5FYB0 599 aaPredicted RBP10.87□□□□□ -0.67
LIMD1-203ENST00000465039 SPANXN2Q5MJ10 180 aa10.87□□□□□ -0.67
LIMD1-203ENST00000465039 KCTD9Q7L273 389 aa10.87□□□□□ -0.67
LIMD1-203ENST00000465039 CMTM1Q8IZ96 169 aa10.87□□□□□ -0.67
LIMD1-203ENST00000465039 COMMD1Q8N668 190 aa10.87□□□□□ -0.67
LIMD1-203ENST00000465039 KLHDC1Q8N7A1 406 aa10.87□□□□□ -0.67
LIMD1-203ENST00000465039 TCTEX1D1Q8N7M0 179 aa10.87□□□□□ -0.67
LIMD1-203ENST00000465039 BVESQ8NE79 360 aa10.87□□□□□ -0.67
LIMD1-203ENST00000465039 CHPT1Q8WUD6 406 aa10.87□□□□□ -0.67
LIMD1-203ENST00000465039 C5orf30Q96GV9 206 aa10.87□□□□□ -0.67
LIMD1-203ENST00000465039 KLK11Q9UBX7 282 aa10.87□□□□□ -0.67
LIMD1-203ENST00000465039 RRHO14718 337 aa10.86□□□□□ -0.67
LIMD1-203ENST00000465039 CREBL2O60519 120 aaPredicted RBP10.86□□□□□ -0.67
LIMD1-203ENST00000465039 IGKV1-16P04430 117 aa10.86□□□□□ -0.67
LIMD1-203ENST00000465039 IFNA6P05013 189 aa10.86□□□□□ -0.67
LIMD1-203ENST00000465039 IGF1P05019 195 aa10.86□□□□□ -0.67
LIMD1-203ENST00000465039 HLA-DMAP28067 261 aa10.86□□□□□ -0.67
LIMD1-203ENST00000465039 S100GP29377 79 aa10.86□□□□□ -0.67
LIMD1-203ENST00000465039 RFX2P48378 723 aa10.86□□□□□ -0.67
LIMD1-203ENST00000465039 DGCR2P98153 550 aa10.86□□□□□ -0.67
LIMD1-203ENST00000465039 SLC35E3Q7Z769 313 aa10.86□□□□□ -0.67
LIMD1-203ENST00000465039 CCDC190Q86UF4 302 aa10.86□□□□□ -0.67
LIMD1-203ENST00000465039 DRAXINQ8NBI3 349 aaPredicted RBP10.86□□□□□ -0.67
LIMD1-203ENST00000465039 OR4S2Q8NH73 311 aa10.86□□□□□ -0.67
LIMD1-203ENST00000465039 SGMS2Q8NHU3 365 aa10.86□□□□□ -0.67
LIMD1-203ENST00000465039 CD300LFQ8TDQ1 290 aa10.86□□□□□ -0.67
LIMD1-203ENST00000465039 SECTM1Q8WVN6 248 aa10.86□□□□□ -0.67
LIMD1-203ENST00000465039 AIFM2Q9BRQ8 373 aa10.86□□□□□ -0.67
LIMD1-203ENST00000465039 ZNF2Q9BSG1 426 aaPredicted RBP10.86□□□□□ -0.67
LIMD1-203ENST00000465039 SLC5A7Q9GZV3 580 aa10.86□□□□□ -0.67
LIMD1-203ENST00000465039 BATF3Q9NR55 127 aa10.86□□□□□ -0.67
LIMD1-203ENST00000465039 FAM212BQ9NTI7 297 aaPredicted RBP10.86□□□□□ -0.67
LIMD1-203ENST00000465039 LINC00473A8K010 186 aa10.85□□□□□ -0.67
LIMD1-203ENST00000465039 PMP2P02689 132 aa10.85□□□□□ -0.67
LIMD1-203ENST00000465039 FGF2P09038 288 aa10.85□□□□□ -0.67
LIMD1-203ENST00000465039 ECI1P42126 302 aa10.85□□□□□ -0.67
LIMD1-203ENST00000465039 F2RL1P55085 397 aa10.85□□□□□ -0.67
LIMD1-203ENST00000465039 TSPAN5P62079 268 aa10.85□□□□□ -0.67
LIMD1-203ENST00000465039 FOXB2Q5VYV0 432 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms