RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 RHOGP84095 191 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 PLGLB1Q02325 96 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 PLP2Q04941 152 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 ARL16Q0P5N6 197 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 IGFBP7Q16270 282 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 TMEM42Q69YG0 159 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 CLEC2AQ6UVW9 174 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 ZDHHC23Q8IYP9 409 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 SHISA5Q8N114 240 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 OR2M7Q8NG81 312 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 OR2Y1Q8NGV0 311 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 CPT1CQ8TCG5 803 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 MEGF9Q9H1U4 602 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 HEYLQ9NQ87 328 aaPredicted RBP3.29□□□□□ -1.88
CCNL1-204ENST00000464316 DOCK9Q9BZ29 2069 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 A0A1B0GUS0 222 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 A0A1W2PS18 150 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 CORTO00230 105 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 HSPB6O14558 160 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 CA2P00918 260 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 ACRP10323 421 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 EN2P19622 333 aaPredicted RBP3.29□□□□□ -1.88
CCNL1-204ENST00000464316 CTRLP40313 264 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 FASLGP48023 281 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 ATP5G3P48201 142 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 CCR5P51681 352 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 CLDN18P56856 261 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 RPL31P62899 125 aaKnown RBP3.29□□□□□ -1.88
CCNL1-204ENST00000464316 SEC11AP67812 179 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 CX3CL1P78423 397 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 TMEM196Q5HYL7 178 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 VHLLQ6RSH7 139 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 AAED1Q7RTV5 226 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 MUC15Q8N387 334 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 C12orf76Q8N812 135 aaPredicted RBP3.29□□□□□ -1.88
CCNL1-204ENST00000464316 ZNF441Q8N8Z8 693 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 OR4P4Q8NGL7 312 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 OR1K1Q8NGR3 316 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 RDH5Q92781 318 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 TMEM54Q969K7 222 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 SF3B5Q9BWJ5 86 aaKnown RBP3.29□□□□□ -1.88
CCNL1-204ENST00000464316 SH2D2AQ9NP31 389 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 TICRRQ7Z2Z1 1910 aa3.29□□□□□ -1.88
CCNL1-204ENST00000464316 TRGV10A0A0A0MS01 117 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 TRBV6-6A0A0A6YYG2 114 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 SPTY2D1-AS1A0A0U1RR47 76 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 LRRC30A6NM36 301 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 RAB29O14966 203 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 DNPH1O43598 174 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 RAMP3O60896 148 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 HAND1O96004 215 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 CTSBP07858 339 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 OR5AL1P0C617 328 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 MGST1P10620 155 aaKnown RBP3.28□□□□□ -1.88
CCNL1-204ENST00000464316 EGR1P18146 543 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 NPY1RP25929 384 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 OPRK1P41145 380 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 NOGQ13253 232 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 SMIM21Q3B7S5 101 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 PRAMEF20Q5VT98 475 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 AMMECR1LQ6DCA0 310 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 RNASEKQ6P5S7 137 aaKnown RBP3.28□□□□□ -1.88
CCNL1-204ENST00000464316 BPIFA4PQ86YQ2 179 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 ODF3L1Q8IXM7 274 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 OR4A16Q8NH70 328 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 GATAD1Q8WUU5 269 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 TMEM45BQ96B21 275 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 GPHA2Q96T91 129 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 SFXN3Q9BWM7 321 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 MS4A6AQ9H2W1 248 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 PLA2G3Q9NZ20 509 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 CLCF1Q9UBD9 225 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 WDR83OSQ9Y284 106 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 PPIAL4AQ9Y536 164 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 MPDZO75970 2070 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 IGLV3-32A0A0A0MS00 114 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 IGKV1-12A0A0C4DH73 117 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 C17orf51A8MQB3 221 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 SHISA8B8ZZ34 492 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 RBFOX2O43251 390 aaKnown RBP eCLIP3.28□□□□□ -1.88
CCNL1-204ENST00000464316 DUX1O43812 170 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 IGKV1D-12P01611 117 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 PSG1P11464 419 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 ZNF32P17041 273 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 BCL3P20749 454 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 CCNOP22674 350 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 FABP6P51161 128 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 MRPS21P82921 87 aaKnown RBP3.28□□□□□ -1.88
CCNL1-204ENST00000464316 PAX2Q02962 417 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 IZUMO4Q1ZYL8 232 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 KRTCAP3Q53RY4 240 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 FOXL2NBQ6ZUU3 175 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 Q8IYB0 196 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 ZNF808Q8N4W9 903 aaPredicted RBP3.28□□□□□ -1.88
CCNL1-204ENST00000464316 FAM131CQ96AQ9 280 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 EAF1Q96JC9 268 aaPredicted RBP3.28□□□□□ -1.88
CCNL1-204ENST00000464316 REPIN1Q9BWE0 567 aaKnown RBP3.28□□□□□ -1.88
CCNL1-204ENST00000464316 MAP1LC3CQ9BXW4 147 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 COMMD5Q9GZQ3 224 aa3.28□□□□□ -1.88
CCNL1-204ENST00000464316 RNF208Q9H0X6 261 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms