RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 INS-IGF2F8WCM5 200 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 G3V2T6 193 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 M0R381 172 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 TRAF3IP2O43734 574 aaPredicted RBP2.57□□□□□ -2
ITGB1-208ENST00000464001 ORC5O43913 435 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 ZNF861PO60384 105 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 IGKV1-39P01597 117 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 IGHG2P01859 326 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 IGKV1D-39P04432 117 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 OR10J4P0C629 311 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 PSG2P11465 335 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 CPMP14384 443 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 S100A2P29034 98 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 NMUP48645 174 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 SRP9P49458 86 aaKnown RBP2.57□□□□□ -2
ITGB1-208ENST00000464001 LINC00313P59037 77 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 ESRRGP62508 458 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 GNB2P62879 340 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 PSG7Q13046 419 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 MRPL2Q5T653 305 aaKnown RBP2.57□□□□□ -2
ITGB1-208ENST00000464001 DCUN1D2Q6PH85 259 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 ANKRD29Q8N6D5 301 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 DCAF4L2Q8NA75 395 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 OR11H6Q8NGC7 330 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 OR2T27Q8NH04 317 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 OR8S1Q8NH09 359 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 OR5J2Q8NH18 312 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 TMEM158Q8WZ71 300 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 DERL3Q96Q80 235 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 OR2M2Q96R28 347 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 MS4A8Q9BY19 250 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 TBL1XR1Q9BZK7 514 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 EIF5A2Q9GZV4 153 aaKnown RBP2.57□□□□□ -2
ITGB1-208ENST00000464001 TMEM222Q9H0R3 208 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 PARVBQ9HBI1 364 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 ZNF331Q9NQX6 463 aaPredicted RBP2.57□□□□□ -2
ITGB1-208ENST00000464001 TBX21Q9UL17 535 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 PAIP2BQ9ULR5 123 aaKnown RBP2.57□□□□□ -2
ITGB1-208ENST00000464001 COQ4Q9Y3A0 265 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 ASB4Q9Y574 426 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 ANKRD12Q6UB98 2062 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 CD109Q6YHK3 1445 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 YTHDC2Q9H6S0 1430 aaKnown RBP2.57□□□□□ -2
ITGB1-208ENST00000464001 ERCC6Q03468 1493 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 SVILO95425 2214 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 GPATCH8Q9UKJ3 1502 aaKnown RBP2.57□□□□□ -2
ITGB1-208ENST00000464001 ZCCHC11Q5TAX3 1644 aaKnown RBP2.57□□□□□ -2
ITGB1-208ENST00000464001 MAST2Q6P0Q8 1798 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 NUP210Q8TEM1 1887 aaPredicted RBP2.56□□□□□ -2
ITGB1-208ENST00000464001 DICER1Q9UPY3 1922 aaKnown RBP2.56□□□□□ -2
ITGB1-208ENST00000464001 A0A1B0GV50 99 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 OR5H1A6NKK0 313 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 TMX2-CTNND1H3BSU7 103 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 SLC37A4O43826 429 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 SERPINE1P05121 402 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 OR56A5P0C7T3 313 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 S100A1P23297 94 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 GABRR1P24046 479 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 PHBP35232 272 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 INPP1P49441 399 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 GABARAPL2P60520 117 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 NCALDP61601 193 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 TIMM10P62072 90 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 DEFB115Q30KQ5 88 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 EBLN2Q6P2I7 272 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 UNQ9165/PRO28630Q6UXU0 137 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 PDPNQ86YL7 162 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 C20orf196Q8IYI0 205 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 UMODL1-AS1Q8N2C9 162 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 FAM24BQ8N5W8 94 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 GDPD1Q8N9F7 314 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 SUMF2Q8NBJ7 301 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 OR4K5Q8NGD3 323 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 OR8J3Q8NGG0 315 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 OR51H1Q8NH63 302 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 C15orf40Q8WUR7 153 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 SKA2Q8WVK7 121 aaPredicted RBP2.56□□□□□ -2
ITGB1-208ENST00000464001 PYURFQ96I23 114 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 DNAJC30Q96LL9 226 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 PFDN5Q99471 154 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 GPER1Q99527 375 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 SEC22CQ9BRL7 303 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 HDHD3Q9BSH5 251 aaPredicted RBP2.56□□□□□ -2
ITGB1-208ENST00000464001 RSPO3Q9BXY4 272 aaPredicted RBP2.56□□□□□ -2
ITGB1-208ENST00000464001 ALX4Q9H161 411 aaPredicted RBP2.56□□□□□ -2
ITGB1-208ENST00000464001 GTSF1LQ9H1H1 148 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 MED28Q9H204 178 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 CXorf21Q9HAI6 301 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 NOX3Q9HBY0 568 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 SLC23A2Q9UGH3 650 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 KLK12Q9UKR0 248 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 NEU3Q9UQ49 428 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 DSCAML1Q8TD84 2053 aa2.56□□□□□ -2
ITGB1-208ENST00000464001 IGHV3-72A0A0B4J1Y9 119 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 OR4C45A6NMZ5 311 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 B4DEV8 164 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 FSTL3O95633 263 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 HLA-DRB1P01911 266 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 INAFM2P0DMQ5 153 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 DEFA6Q01524 100 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms