RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 MRGPRDQ8TDS7 321 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 RAB40AQ8WXH6 277 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 RAB1CQ92928 201 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 LEAP2Q969E1 77 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 UPRTQ96BW1 309 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 C5orf30Q96GV9 206 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 URM1Q9BTM9 101 aaKnown RBP2.89□□□□□ -1.95
SCFD1-204ENST00000463622 PATZ1Q9HBE1 687 aaKnown RBP2.89□□□□□ -1.95
SCFD1-204ENST00000463622 OR1A1Q9P1Q5 309 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 TBC1D24Q9ULP9 559 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 RBMX2Q9Y388 322 aaKnown RBP2.89□□□□□ -1.95
SCFD1-204ENST00000463622 RYR2Q92736 4967 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 TRAV38-1A0A0B4J264 116 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 hDV102S1A0JD36 115 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 FAM90A7PA6NKC0 464 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 LRRC30A6NM36 301 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 FAM90A22PA8MWA6 464 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 FAM90A12PA8MX19 464 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 FAM90A23PA8MXZ1 464 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 C12orf77C9JDV5 145 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 SLC31A2O15432 143 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 ORC5O43913 435 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 ZNF735P0CB33 412 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 GSTT2P0CG29 244 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 GSTT2BP0CG30 244 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 IGHV4-38-2P0DP08 117 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 IL7P13232 177 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 EDDM3BP56851 147 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 MZT1Q08AG7 82 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 KLRD1Q13241 179 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 GPR176Q14439 515 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 FAM189A2Q15884 450 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 LTC4SQ16873 150 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 TMEM155Q4W5P6 130 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 PYDC2Q56P42 97 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 IGSF11Q5DX21 431 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 PRAMEF5Q5TYX0 476 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 PYHIN1Q6K0P9 492 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 HCP5Q6MZN7 132 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 GSG1LQ6UXU4 331 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 BTN2A1Q7KYR7 527 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 Q8IYB0 196 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 C1orf87Q8N0U7 546 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 OR8H2Q8N162 312 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 OR56B1Q8NGI3 324 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 RFESDQ8TAC1 157 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 SETD6Q8TBK2 473 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 MRAPQ8TCY5 172 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 NEK7Q8TDX7 302 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 SMIM4Q8WVI0 70 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 H1FXQ92522 213 aaKnown RBP2.88□□□□□ -1.95
SCFD1-204ENST00000463622 MRPS24Q96EL2 167 aaKnown RBP2.88□□□□□ -1.95
SCFD1-204ENST00000463622 CPNE2Q96FN4 548 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-204ENST00000463622 S100A16Q96FQ6 103 aaKnown RBP2.88□□□□□ -1.95
SCFD1-204ENST00000463622 CMTM3Q96MX0 182 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 CMSS1Q9BQ75 279 aaKnown RBP2.88□□□□□ -1.95
SCFD1-204ENST00000463622 ST6GALNAC5Q9BVH7 336 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 C16orf95Q9H693 158 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 Q9N2K0 584 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 ABCB10Q9NRK6 738 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 PLEKHJ1Q9NW61 149 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 RASL12Q9NYN1 266 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 OR6C3Q9NZP0 311 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 KAAG1Q9UBP8 84 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 SLC25A10Q9UBX3 287 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-204ENST00000463622 HSF4Q9ULV5 492 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 COL7A1Q02388 2944 aa2.88□□□□□ -1.95
SCFD1-204ENST00000463622 IGHV3OR16-10A0A075B7F0 116 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 MEIKINA0A087WXM9 373 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 IGKV1D-13A0A0B4J2D9 117 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 A0A1W2PPE3 182 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 ODAMA1E959 279 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 METTL21EPA6NDL7 271 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 NKX6-3A6NJ46 265 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 PRSS47A8MTI9 375 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 A8MXK9 166 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 MCRIP1C9JLW8 97 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 IFNL4K9M1U5 179 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 SDCBPO00560 298 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-204ENST00000463622 SH2D1BO14796 132 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 CTDSPLO15194 276 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 GSTZ1O43708 216 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-204ENST00000463622 PMP2P02689 132 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 CD3DP04234 171 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 CRYBA1P05813 215 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 CSN2P05814 226 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 IGKV1-13P0DP09 117 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 HLA-DMAP28067 261 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 S100A5P33763 92 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 PRSS3P35030 304 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 GLP1RP43220 463 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 GNG2P59768 71 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 BPIFB3P59826 476 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 ARL16Q0P5N6 197 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 ARFRP1Q13795 201 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 DIAPH2-AS1Q14236 149 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 HMGN3Q15651 99 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 C2orf68Q2NKX9 166 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 DEFB112Q30KQ8 113 aa2.87□□□□□ -1.95
SCFD1-204ENST00000463622 KRBOX4Q5JUW0 171 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 274.6 ms