RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 FBLN7Q53RD9 439 aa11.16□□□□□ -0.62
PHACTR4-203ENST00000463428 GLDNQ6ZMI3 551 aaPredicted RBP11.16□□□□□ -0.62
PHACTR4-203ENST00000463428 ZNF66Q6ZN08 573 aa11.16□□□□□ -0.62
PHACTR4-203ENST00000463428 MOB3BQ86TA1 216 aa11.16□□□□□ -0.62
PHACTR4-203ENST00000463428 DUSP18Q8NEJ0 188 aa11.16□□□□□ -0.62
PHACTR4-203ENST00000463428 TMEM230Q96A57 120 aa11.16□□□□□ -0.62
PHACTR4-203ENST00000463428 SCGB3A2Q96PL1 93 aa11.16□□□□□ -0.62
PHACTR4-203ENST00000463428 HSD17B10Q99714 261 aaKnown RBP11.16□□□□□ -0.62
PHACTR4-203ENST00000463428 DPAGT1Q9H3H5 408 aa11.16□□□□□ -0.62
PHACTR4-203ENST00000463428 SLC2A9Q9NRM0 540 aa11.16□□□□□ -0.62
PHACTR4-203ENST00000463428 CD1BP29016 333 aa11.15□□□□□ -0.62
PHACTR4-203ENST00000463428 IER3P46695 156 aa11.15□□□□□ -0.62
PHACTR4-203ENST00000463428 PIGPP57054 158 aa11.15□□□□□ -0.62
PHACTR4-203ENST00000463428 EBI3Q14213 229 aa11.15□□□□□ -0.62
PHACTR4-203ENST00000463428 NRARPQ7Z6K4 114 aa11.15□□□□□ -0.62
PHACTR4-203ENST00000463428 CMTM1Q8IZ96 169 aa11.15□□□□□ -0.62
PHACTR4-203ENST00000463428 SIGLECL1Q8N7X8 197 aa11.15□□□□□ -0.62
PHACTR4-203ENST00000463428 ADAD2Q8NCV1 583 aaKnown RBP11.15□□□□□ -0.62
PHACTR4-203ENST00000463428 ADTRPQ96IZ2 230 aa11.15□□□□□ -0.62
PHACTR4-203ENST00000463428 SSX3Q99909 188 aa11.15□□□□□ -0.62
PHACTR4-203ENST00000463428 FLVCR2Q9UPI3 526 aa11.15□□□□□ -0.62
PHACTR4-203ENST00000463428 IGHV3-72A0A0B4J1Y9 119 aa11.14□□□□□ -0.63
PHACTR4-203ENST00000463428 FAM240BA0A1B0GVZ2 78 aa11.14□□□□□ -0.63
PHACTR4-203ENST00000463428 MPPED1O15442 326 aa11.14□□□□□ -0.63
PHACTR4-203ENST00000463428 VENTXO95231 258 aa11.14□□□□□ -0.63
PHACTR4-203ENST00000463428 FAM157CP0CG43 387 aa11.14□□□□□ -0.63
PHACTR4-203ENST00000463428 CD24P25063 80 aa11.14□□□□□ -0.63
PHACTR4-203ENST00000463428 DHODHQ02127 395 aa11.14□□□□□ -0.63
PHACTR4-203ENST00000463428 LRRC75BQ2VPJ9 315 aa11.14□□□□□ -0.63
PHACTR4-203ENST00000463428 TBC1D26Q86UD7 250 aa11.14□□□□□ -0.63
PHACTR4-203ENST00000463428 THNSL2Q86YJ6 484 aa11.14□□□□□ -0.63
PHACTR4-203ENST00000463428 C14orf166Q9Y224 244 aaKnown RBP11.14□□□□□ -0.63
PHACTR4-203ENST00000463428 RLN1P04808 185 aa11.13□□□□□ -0.63
PHACTR4-203ENST00000463428 SNRNP70P08621 437 aaKnown RBP11.13□□□□□ -0.63
PHACTR4-203ENST00000463428 SPNP16150 400 aa11.13□□□□□ -0.63
PHACTR4-203ENST00000463428 F2RP25116 425 aa11.13□□□□□ -0.63
PHACTR4-203ENST00000463428 BRS3P32247 399 aa11.13□□□□□ -0.63
PHACTR4-203ENST00000463428 MC5RP33032 325 aa11.13□□□□□ -0.63
PHACTR4-203ENST00000463428 TAGLNQ01995 201 aaKnown RBP11.13□□□□□ -0.63
PHACTR4-203ENST00000463428 ABCA11PQ4W5N1 156 aa11.13□□□□□ -0.63
PHACTR4-203ENST00000463428 KCTD9Q7L273 389 aa11.13□□□□□ -0.63
PHACTR4-203ENST00000463428 ZFAND2BQ8WV99 257 aa11.13□□□□□ -0.63
PHACTR4-203ENST00000463428 ZDHHC16Q969W1 377 aa11.13□□□□□ -0.63
PHACTR4-203ENST00000463428 SLC35D1Q9NTN3 355 aa11.13□□□□□ -0.63
PHACTR4-203ENST00000463428 COPZ2Q9P299 210 aa11.13□□□□□ -0.63
PHACTR4-203ENST00000463428 CRYM-AS1A6NIL9 109 aa11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 H3BUX3 64 aa11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 ARPC1BO15143 372 aaKnown RBP11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 IGHV4-59P01825 116 aa11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 MECP2P51608 486 aaKnown RBP11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 ARHGDIBP52566 201 aa11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 SUPT4H1P63272 117 aaKnown RBP11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 CATR1Q13166 79 aa11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 SCGB2A2Q13296 93 aa11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 ZNF585BQ52M93 769 aa11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 CCBE1Q6UXH8 406 aaPredicted RBP11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 SLC25A42Q86VD7 318 aa11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 CENPSQ8N2Z9 138 aa11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 Q8N6K4 173 aa11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 CCDC71LQ8N9Z2 235 aa11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 OR51H1Q8NH63 302 aa11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 TCTEX1D2Q8WW35 142 aa11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 EAF1Q96JC9 268 aaPredicted RBP11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 RITA1Q96K30 269 aa11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 ALX4Q9H161 411 aaPredicted RBP11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 C20orf85Q9H1P6 137 aa11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 WASHC3Q9Y3C0 194 aa11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 NUBP2Q9Y5Y2 271 aa11.12□□□□□ -0.63
PHACTR4-203ENST00000463428 A6NDX4 124 aa11.11□□□□□ -0.63
PHACTR4-203ENST00000463428 HOXA3O43365 443 aaPredicted RBP11.11□□□□□ -0.63
PHACTR4-203ENST00000463428 PTTG1O95997 202 aa11.11□□□□□ -0.63
PHACTR4-203ENST00000463428 IGKV1D-33P01593 117 aa11.11□□□□□ -0.63
PHACTR4-203ENST00000463428 IGKV1-33P01594 117 aa11.11□□□□□ -0.63
PHACTR4-203ENST00000463428 IGKV1-16P04430 117 aa11.11□□□□□ -0.63
PHACTR4-203ENST00000463428 VSIG10L2P0DP72 767 aa11.11□□□□□ -0.63
PHACTR4-203ENST00000463428 S100GP29377 79 aa11.11□□□□□ -0.63
PHACTR4-203ENST00000463428 TMED4Q7Z7H5 227 aa11.11□□□□□ -0.63
PHACTR4-203ENST00000463428 PDPNQ86YL7 162 aa11.11□□□□□ -0.63
PHACTR4-203ENST00000463428 ENKURQ8TC29 256 aa11.11□□□□□ -0.63
PHACTR4-203ENST00000463428 CAPSLQ8WWF8 208 aa11.11□□□□□ -0.63
PHACTR4-203ENST00000463428 TP53RKQ96S44 253 aa11.11□□□□□ -0.63
PHACTR4-203ENST00000463428 NAA60Q9H7X0 242 aa11.11□□□□□ -0.63
PHACTR4-203ENST00000463428 ESM1Q9NQ30 184 aa11.11□□□□□ -0.63
PHACTR4-203ENST00000463428 FAM212BQ9NTI7 297 aaPredicted RBP11.11□□□□□ -0.63
PHACTR4-203ENST00000463428 NUDT15Q9NV35 164 aa11.11□□□□□ -0.63
PHACTR4-203ENST00000463428 TCF19Q9Y242 345 aa11.11□□□□□ -0.63
PHACTR4-203ENST00000463428 PRELID3BQ9Y3B1 194 aa11.11□□□□□ -0.63
PHACTR4-203ENST00000463428 TRAV6A0A075B6T7 132 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 C3orf85A0A1B0GTC6 90 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 RNF212BA8MTL3 300 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 RBFOX2O43251 390 aaKnown RBP eCLIP11.1□□□□□ -0.634e-6■■■■□ 21.2
PHACTR4-203ENST00000463428 RAMP3O60896 148 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 FCGR3BO75015 233 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 APOA2P02652 100 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 H2AFB2P0C5Z0 115 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 FAM106CPP0CH98 169 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 RRASP10301 218 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 AKR1C4P17516 323 aa11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 ANXA7P20073 488 aaKnown RBP11.1□□□□□ -0.63
PHACTR4-203ENST00000463428 KIR2DS2P43631 304 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms