RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 DRAXINQ8NBI3 349 aaPredicted RBP11.58□□□□□ -0.56
COL6A1-202ENST00000463060 OR5AN1Q8NGI8 311 aa11.58□□□□□ -0.56
COL6A1-202ENST00000463060 MRPL20Q9BYC9 149 aaKnown RBP11.58□□□□□ -0.56
COL6A1-202ENST00000463060 MEGF9Q9H1U4 602 aa11.58□□□□□ -0.56
COL6A1-202ENST00000463060 NAA60Q9H7X0 242 aa11.58□□□□□ -0.56
COL6A1-202ENST00000463060 FAM212BQ9NTI7 297 aaPredicted RBP11.58□□□□□ -0.56
COL6A1-202ENST00000463060 TMEM160Q9NX00 188 aa11.58□□□□□ -0.56
COL6A1-202ENST00000463060 IGHV1-3A0A0C4DH29 117 aa11.57□□□□□ -0.56
COL6A1-202ENST00000463060 C9orf170A2RU37 121 aa11.57□□□□□ -0.56
COL6A1-202ENST00000463060 REG1BP48304 166 aa11.57□□□□□ -0.56
COL6A1-202ENST00000463060 ZNF585BQ52M93 769 aa11.57□□□□□ -0.56
COL6A1-202ENST00000463060 BRD3OSQ6XYD6 125 aa11.57□□□□□ -0.56
COL6A1-202ENST00000463060 GLDNQ6ZMI3 551 aaPredicted RBP11.57□□□□□ -0.56
COL6A1-202ENST00000463060 TGIF2LXQ8IUE1 241 aa11.57□□□□□ -0.56
COL6A1-202ENST00000463060 OR8H3Q8N146 312 aa11.57□□□□□ -0.56
COL6A1-202ENST00000463060 TCTEX1D1Q8N7M0 179 aa11.57□□□□□ -0.56
COL6A1-202ENST00000463060 NANPQ8TBE9 248 aa11.57□□□□□ -0.56
COL6A1-202ENST00000463060 GLYATL2Q8WU03 294 aa11.57□□□□□ -0.56
COL6A1-202ENST00000463060 CFHR4Q92496 578 aa11.57□□□□□ -0.56
COL6A1-202ENST00000463060 ADTRPQ96IZ2 230 aa11.57□□□□□ -0.56
COL6A1-202ENST00000463060 TP53RKQ96S44 253 aa11.57□□□□□ -0.56
COL6A1-202ENST00000463060 BEX2Q9BXY8 128 aa11.57□□□□□ -0.56
COL6A1-202ENST00000463060 BEX1Q9HBH7 125 aa11.57□□□□□ -0.56
COL6A1-202ENST00000463060 YAE1D1Q9NRH1 226 aa11.57□□□□□ -0.56
COL6A1-202ENST00000463060 NUP50Q9UKX7 468 aa11.57□□□□□ -0.56
COL6A1-202ENST00000463060 SOX21Q9Y651 276 aaPredicted RBP11.57□□□□□ -0.56
COL6A1-202ENST00000463060 MXRA5Q9NR99 2828 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 TEX13DA0A0J9YY54 714 aaPredicted RBP11.56□□□□□ -0.56
COL6A1-202ENST00000463060 A0A0U1RQK1 487 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 C3orf85A0A1B0GTC6 90 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 C7orf66A4D0T2 115 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 FAM90A9PA6NNJ1 464 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 A8MV72 311 aaPredicted RBP11.56□□□□□ -0.56
COL6A1-202ENST00000463060 H0Y980 276 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 TXNL1O43396 289 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 PRAF2O60831 178 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 B3GALNT1O75752 331 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 SFT2D2O95562 160 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 DHFRP00374 187 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 EPHA1P21709 976 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 UCP1P25874 307 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 THBS3P49746 956 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 DHRS2Q13268 280 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 TMEM187Q14656 261 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 SSX2Q16385 188 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 FAM120AOSQ5T036 256 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 LYG2Q86SG7 212 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 SGPP2Q8IWX5 399 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 RPEQ96AT9 228 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 HILPDAQ9Y5L2 63 aa11.56□□□□□ -0.56
COL6A1-202ENST00000463060 RNF212BA8MTL3 300 aa11.55□□□□□ -0.56
COL6A1-202ENST00000463060 H0YJW9 148 aa11.55□□□□□ -0.56
COL6A1-202ENST00000463060 RBFOX2O43251 390 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL6A1-202ENST00000463060 PAX6P26367 422 aa11.55□□□□□ -0.56
COL6A1-202ENST00000463060 S100GP29377 79 aa11.55□□□□□ -0.56
COL6A1-202ENST00000463060 TAGLNQ01995 201 aaKnown RBP11.55□□□□□ -0.56
COL6A1-202ENST00000463060 TATDN3Q17R31 274 aa11.55□□□□□ -0.56
COL6A1-202ENST00000463060 SP6Q3SY56 376 aa11.55□□□□□ -0.56
COL6A1-202ENST00000463060 OR52B4Q8NGK2 314 aa11.55□□□□□ -0.56
COL6A1-202ENST00000463060 OR51H1Q8NH63 302 aa11.55□□□□□ -0.56
COL6A1-202ENST00000463060 TCTEX1D2Q8WW35 142 aa11.55□□□□□ -0.56
COL6A1-202ENST00000463060 SEC22CQ9BRL7 303 aa11.55□□□□□ -0.56
COL6A1-202ENST00000463060 TMEM222Q9H0R3 208 aa11.55□□□□□ -0.56
COL6A1-202ENST00000463060 PRDM13Q9H4Q3 707 aa11.55□□□□□ -0.56
COL6A1-202ENST00000463060 KCNIP3Q9Y2W7 256 aa11.55□□□□□ -0.56
COL6A1-202ENST00000463060 A0A0A6YYJ9 748 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 VGLL3A8MV65 326 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 SNRPGP15A8MWD9 76 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 TIMM23O14925 209 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 RAMP3O60896 148 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 DUS4LO95620 317 aaKnown RBP11.54□□□□□ -0.56
COL6A1-202ENST00000463060 CDS2O95674 445 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 IFNA2P01563 188 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 IGKV1-39P01597 117 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 IGKV1D-39P04432 117 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 OR5AC1P0C628 307 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 CD1BP29016 333 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 MC5RP33032 325 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 DYNLT3P51808 116 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 CATR1Q13166 79 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 EBI3Q14213 229 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 ANKRD55Q3KP44 614 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 C4orf46Q504U0 113 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 CCDC144NLQ6NUI1 221 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 BCL6BQ8N143 479 aaPredicted RBP11.54□□□□□ -0.56
COL6A1-202ENST00000463060 TEX29Q8N6K0 151 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 LRTM2Q8N967 370 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 LHFPL5Q8TAF8 219 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 PIFOQ8TCI5 191 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 ZNF431Q8TF32 576 aaPredicted RBP11.54□□□□□ -0.56
COL6A1-202ENST00000463060 MITD1Q8WV92 249 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 RBMXL1Q96E39 390 aaKnown RBP11.54□□□□□ -0.56
COL6A1-202ENST00000463060 TMEM56Q96MV1 263 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 PRELID3BQ9Y3B1 194 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 TMEM56-RWDD3S4R434 201 aa11.54□□□□□ -0.56
COL6A1-202ENST00000463060 A0A0B4J2A0 478 aa11.53□□□□□ -0.56
COL6A1-202ENST00000463060 HLA-AP01891 365 aaKnown RBP11.53□□□□□ -0.56
COL6A1-202ENST00000463060 KIR2DS2P43631 304 aa11.53□□□□□ -0.56
COL6A1-202ENST00000463060 SLC9A3R2Q15599 337 aa11.53□□□□□ -0.56
COL6A1-202ENST00000463060 LIAT1Q6ZQX7 453 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 345.6 ms