RNA–Protein interactions for RNA: ENST00000462429.1

VPS41-210, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 3

Gene VPS41, Length 347 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-210ENST00000462429 LY6EQ16553 131 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 CCSMST1Q4G0I0 132 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 LUZP6Q538Z0 58 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 KLHL12Q53G59 568 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 TTC32Q5I0X7 151 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 RPL13AP3Q6NVV1 102 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 SLC48A1Q6P1K1 146 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 ZNF773Q6PK81 442 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 HMGN2P46Q86SG4 172 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 CLECL1Q8IZS7 167 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 CYP4Z2PQ8N1L4 340 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 LRRC25Q8N386 305 aaPredicted RBP2.36□□□□□ -2.03
VPS41-210ENST00000462429 C2orf73Q8N5S3 287 aaPredicted RBP2.36□□□□□ -2.03
VPS41-210ENST00000462429 CDRT4Q8N9R6 151 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 GATSQ8NAP1 163 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 OR1L1Q8NH94 360 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 ENKURQ8TC29 256 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 NT5CQ8TCD5 201 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 NAT14Q8WUY8 206 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 S100ZQ8WXG8 99 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 CIDECQ96AQ7 238 aaPredicted RBP2.36□□□□□ -2.03
VPS41-210ENST00000462429 MS4A6EQ96DS6 147 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 MRPL48Q96GC5 212 aaKnown RBP2.36□□□□□ -2.03
VPS41-210ENST00000462429 SLC35G5Q96KT7 338 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 TRNT1Q96Q11 434 aaKnown RBP2.36□□□□□ -2.03
VPS41-210ENST00000462429 COPS4Q9BT78 406 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 CCDC90BQ9GZT6 254 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 GABARAPL1Q9H0R8 117 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 RAB1BQ9H0U4 201 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 SYT4Q9H2B2 425 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 SLC38A1Q9H2H9 487 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 UCK1Q9HA47 277 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 CXorf21Q9HAI6 301 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 BCL2L10Q9HD36 194 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 CA10Q9NS85 328 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 C14orf105Q9NVL8 296 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 UBAP1Q9NZ09 502 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 SLC23A2Q9UGH3 650 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 CLEC2DQ9UHP7 191 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 ERGIC3Q9Y282 383 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 CBY1Q9Y3M2 126 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 SLC22A7Q9Y694 548 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 V9GYQ6 96 aa2.36□□□□□ -2.03
VPS41-210ENST00000462429 PRRC2BQ5JSZ5 2229 aaKnown RBP2.36□□□□□ -2.03
VPS41-210ENST00000462429 KIAA1549LQ6ZVL6 1849 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 CENPVL3A0A0U1RRI6 287 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 VGLL3A8MV65 326 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 hCG_2039718K7EN88 272 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 M0R1B8 84 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 HMGN4O00479 90 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 TOX3O15405 576 aaPredicted RBP2.35□□□□□ -2.03
VPS41-210ENST00000462429 YKT6O15498 198 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 GPR75O95800 540 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 CYB5R3P00387 301 aaPredicted RBP2.35□□□□□ -2.03
VPS41-210ENST00000462429 HMGN1P05114 100 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 DBIP07108 87 aaKnown RBP2.35□□□□□ -2.03
VPS41-210ENST00000462429 GUSBP08236 651 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 MMP7P09237 267 aaPredicted RBP2.35□□□□□ -2.03
VPS41-210ENST00000462429 TFPTP0C1Z6 253 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 OR5AL1P0C617 328 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 CCL2P13500 99 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 MYL12AP19105 171 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 PSMA1P25786 263 aaKnown RBP2.35□□□□□ -2.03
VPS41-210ENST00000462429 IL3RAP26951 378 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 S100A5P33763 92 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 XKP51811 444 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 TAS2R41P59536 307 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 GRB2P62993 217 aaKnown RBP2.35□□□□□ -2.03
VPS41-210ENST00000462429 STX4Q12846 297 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 APOFQ13790 326 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 IGFL1Q6UW32 110 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 ZNF550Q7Z398 422 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 NEGR1Q7Z3B1 354 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 CLVS1Q8IUQ0 354 aaPredicted RBP2.35□□□□□ -2.03
VPS41-210ENST00000462429 MSRB3Q8IXL7 192 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 STX19Q8N4C7 294 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 BPIFB6Q8NFQ5 453 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 OR52L1Q8NGH7 329 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 OR9A2Q8NGT5 310 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 TEX47Q8TBZ9 253 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 KLK6Q92876 244 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 HGDQ93099 445 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 SLC35B4Q969S0 331 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 PPP1R14BQ96C90 147 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 ZNF75AQ96N20 296 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 GPR82Q96P67 336 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 STACQ99469 402 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 OR51I1Q9H343 314 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 NMNAT1Q9HAN9 279 aaPredicted RBP2.35□□□□□ -2.03
VPS41-210ENST00000462429 ASB4Q9Y574 426 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 MTCH2Q9Y6C9 303 aa2.35□□□□□ -2.03
VPS41-210ENST00000462429 CEP350Q5VT06 3117 aa2.34□□□□□ -2.03
VPS41-210ENST00000462429 IGHV6-1A0A0B4J1U7 121 aa2.34□□□□□ -2.03
VPS41-210ENST00000462429 LINC00854A0A1B0GVQ3 168 aa2.34□□□□□ -2.03
VPS41-210ENST00000462429 ISPDA4D126 451 aa2.34□□□□□ -2.03
VPS41-210ENST00000462429 TLCD2A6NGC4 264 aa2.34□□□□□ -2.03
VPS41-210ENST00000462429 CLDN24A6NM45 220 aa2.34□□□□□ -2.03
VPS41-210ENST00000462429 ZNF850A8MQ14 1090 aa2.34□□□□□ -2.03
VPS41-210ENST00000462429 H0YGG7 62 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms