RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 UNQ5815/PRO19632Q6UWF5 114 aa10.84□□□□□ -0.67
USP4-206ENST00000461553 PPP1R27Q86WC6 154 aa10.84□□□□□ -0.67
USP4-206ENST00000461553 ZNF383Q8NA42 475 aa10.84□□□□□ -0.67
USP4-206ENST00000461553 FCGR1BQ92637 280 aa10.84□□□□□ -0.67
USP4-206ENST00000461553 ARPC1AQ92747 370 aa10.84□□□□□ -0.67
USP4-206ENST00000461553 CLCC1Q96S66 551 aa10.84□□□□□ -0.67
USP4-206ENST00000461553 GINS4Q9BRT9 223 aa10.84□□□□□ -0.67
USP4-206ENST00000461553 FAM103A1Q9BTL3 118 aaKnown RBP10.84□□□□□ -0.67
USP4-206ENST00000461553 TOLLIPQ9H0E2 274 aa10.84□□□□□ -0.67
USP4-206ENST00000461553 SLC35D1Q9NTN3 355 aa10.84□□□□□ -0.67
USP4-206ENST00000461553 KCNK7Q9Y2U2 307 aa10.84□□□□□ -0.67
USP4-206ENST00000461553 RBM7Q9Y580 266 aaKnown RBP10.84□□□□□ -0.67
USP4-206ENST00000461553 TNCP24821 2201 aa10.84□□□□□ -0.67
USP4-206ENST00000461553 A0A0B4J203 849 aa10.83□□□□□ -0.68
USP4-206ENST00000461553 RAB27BO00194 218 aa10.83□□□□□ -0.68
USP4-206ENST00000461553 SLC25A17O43808 307 aa10.83□□□□□ -0.68
USP4-206ENST00000461553 LGALS1P09382 135 aaKnown RBP10.83□□□□□ -0.68
USP4-206ENST00000461553 TALDO1P37837 337 aa10.83□□□□□ -0.68
USP4-206ENST00000461553 INSL3P51460 131 aa10.83□□□□□ -0.68
USP4-206ENST00000461553 KIAA0141Q14154 515 aaPredicted RBP10.83□□□□□ -0.68
USP4-206ENST00000461553 ARL6IP1Q15041 203 aa10.83□□□□□ -0.68
USP4-206ENST00000461553 PSG5Q15238 335 aa10.83□□□□□ -0.68
USP4-206ENST00000461553 IGSF11Q5DX21 431 aa10.83□□□□□ -0.68
USP4-206ENST00000461553 ASPHD1Q5U4P2 390 aa10.83□□□□□ -0.68
USP4-206ENST00000461553 UBE2UQ5VVX9 321 aa10.83□□□□□ -0.68
USP4-206ENST00000461553 GRPEL2Q8TAA5 225 aa10.83□□□□□ -0.68
USP4-206ENST00000461553 MAFIPQ8WZ33 124 aa10.83□□□□□ -0.68
USP4-206ENST00000461553 FLYWCH2Q96CP2 140 aaKnown RBP10.83□□□□□ -0.68
USP4-206ENST00000461553 HARBI1Q96MB7 349 aa10.83□□□□□ -0.68
USP4-206ENST00000461553 PRR25Q96S07 402 aa10.83□□□□□ -0.68
USP4-206ENST00000461553 CENPOQ9BU64 300 aa10.83□□□□□ -0.68
USP4-206ENST00000461553 GAB2Q9UQC2 676 aa10.83□□□□□ -0.68
USP4-206ENST00000461553 TRBV6-7A0A0A0MS04 114 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 SMIM30A4D0T7 59 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 LINC01619G3V211 115 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 FCN1O00602 326 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 OVOL1O14753 267 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 SOX15O60248 233 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 PROP1O75360 226 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 OR8U9P0C7N5 309 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 GSTT2P0CG29 244 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 GSTT2BP0CG30 244 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 TPPP2P59282 170 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 RTL8BQ17RB0 113 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 ZNF562Q6V9R5 426 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 CASTOR1Q8WTX7 329 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 ALX4Q9H161 411 aaPredicted RBP10.82□□□□□ -0.68
USP4-206ENST00000461553 ATG5Q9H1Y0 275 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 SLA2Q9H6Q3 261 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 TPSG1Q9NRR2 321 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 SDHAF2Q9NX18 166 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 ZNF230Q9UIE0 474 aaPredicted RBP10.82□□□□□ -0.68
USP4-206ENST00000461553 STUB1Q9UNE7 303 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 NUBP2Q9Y5Y2 271 aa10.82□□□□□ -0.68
USP4-206ENST00000461553 NOTOA8MTQ0 251 aa10.81□□□□□ -0.68
USP4-206ENST00000461553 LY86O95711 162 aa10.81□□□□□ -0.68
USP4-206ENST00000461553 LINC00205P59089 165 aa10.81□□□□□ -0.68
USP4-206ENST00000461553 AKIRIN2Q53H80 203 aa10.81□□□□□ -0.68
USP4-206ENST00000461553 LFNGQ8NES3 379 aa10.81□□□□□ -0.68
USP4-206ENST00000461553 DCUN1D4Q92564 292 aa10.81□□□□□ -0.68
USP4-206ENST00000461553 TXNL4BQ9NX01 149 aaKnown RBP10.81□□□□□ -0.68
USP4-206ENST00000461553 ZNF256Q9Y2P7 627 aaPredicted RBP10.81□□□□□ -0.68
USP4-206ENST00000461553 IGHV4OR15-8A0A075B7B6 117 aa10.8□□□□□ -0.68
USP4-206ENST00000461553 A0A087WW49 117 aa10.8□□□□□ -0.68
USP4-206ENST00000461553 SHOXO15266 292 aa10.8□□□□□ -0.68
USP4-206ENST00000461553 SAP30O75446 220 aa10.8□□□□□ -0.68
USP4-206ENST00000461553 SCGNO76038 276 aa10.8□□□□□ -0.68
USP4-206ENST00000461553 CNIH1O95406 144 aa10.8□□□□□ -0.68
USP4-206ENST00000461553 IGHV3-11P01762 117 aa10.8□□□□□ -0.68
USP4-206ENST00000461553 EGR2P11161 476 aaPredicted RBP10.8□□□□□ -0.68
USP4-206ENST00000461553 DTYMKP23919 212 aa10.8□□□□□ -0.68
USP4-206ENST00000461553 FGF9P31371 208 aaPredicted RBP10.8□□□□□ -0.68
USP4-206ENST00000461553 SLURP1P55000 103 aa10.8□□□□□ -0.68
USP4-206ENST00000461553 TAGLNQ01995 201 aaKnown RBP10.8□□□□□ -0.68
USP4-206ENST00000461553 FXYD3Q14802 87 aa10.8□□□□□ -0.68
USP4-206ENST00000461553 SRSF7Q16629 238 aaKnown RBP eCLIP10.8□□□□□ -0.68
USP4-206ENST00000461553 Q6ZS49 121 aa10.8□□□□□ -0.68
USP4-206ENST00000461553 ZNF429Q86V71 674 aa10.8□□□□□ -0.68
USP4-206ENST00000461553 NR2C2APQ86WQ0 139 aa10.8□□□□□ -0.68
USP4-206ENST00000461553 SPARTQ8N0X7 666 aa10.8□□□□□ -0.68
USP4-206ENST00000461553 ADTRPQ96IZ2 230 aa10.8□□□□□ -0.68
USP4-206ENST00000461553 ZNF355PQ9NSJ1 428 aa10.8□□□□□ -0.68
USP4-206ENST00000461553 SCOCQ9UIL1 159 aa10.8□□□□□ -0.68
USP4-206ENST00000461553 SSR3Q9UNL2 185 aa10.8□□□□□ -0.68
USP4-206ENST00000461553 HUWE1Q7Z6Z7 4374 aaKnown RBP10.79□□□□□ -0.68
USP4-206ENST00000461553 H3BUA1 57 aa10.79□□□□□ -0.68
USP4-206ENST00000461553 TRGV3P03979 118 aa10.79□□□□□ -0.68
USP4-206ENST00000461553 RRASP10301 218 aa10.79□□□□□ -0.68
USP4-206ENST00000461553 LGALS7P47929 136 aa10.79□□□□□ -0.68
USP4-206ENST00000461553 PITPNAQ00169 270 aa10.79□□□□□ -0.68
USP4-206ENST00000461553 TPRA1Q86W33 373 aa10.79□□□□□ -0.68
USP4-206ENST00000461553 H1FOOQ8IZA3 346 aaPredicted RBP10.79□□□□□ -0.68
USP4-206ENST00000461553 POC5Q8NA72 575 aa10.79□□□□□ -0.68
USP4-206ENST00000461553 C5orf30Q96GV9 206 aa10.79□□□□□ -0.68
USP4-206ENST00000461553 MS4A10Q96PG2 267 aa10.79□□□□□ -0.68
USP4-206ENST00000461553 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.79□□□□□ -0.68
USP4-206ENST00000461553 DAPK2Q9UIK4 370 aa10.79□□□□□ -0.68
USP4-206ENST00000461553 KMT2CQ8NEZ4 4911 aaKnown RBP10.79□□□□□ -0.68
USP4-206ENST00000461553 ARPC1BO15143 372 aaKnown RBP10.78□□□□□ -0.68
USP4-206ENST00000461553 IGLV2-23P01705 113 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms