RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 ANXA10Q9UJ72 324 aa12.08□□□□□ -0.48
VARS-219ENST00000461328 WSB1Q9Y6I7 421 aa12.08□□□□□ -0.48
VARS-219ENST00000461328 A3GALT2U3KPV4 340 aa12.08□□□□□ -0.48
VARS-219ENST00000461328 IGHV7-81A0A0B4J1V7 117 aa12.07□□□□□ -0.48
VARS-219ENST00000461328 PROP1O75360 226 aa12.07□□□□□ -0.48
VARS-219ENST00000461328 IGKV1-16P04430 117 aa12.07□□□□□ -0.48
VARS-219ENST00000461328 IGF1P05019 195 aa12.07□□□□□ -0.48
VARS-219ENST00000461328 RPLP1P05386 114 aaKnown RBP12.07□□□□□ -0.48
VARS-219ENST00000461328 THBS3P49746 956 aa12.07□□□□□ -0.48
VARS-219ENST00000461328 LUMP51884 338 aaPredicted RBP12.07□□□□□ -0.48
VARS-219ENST00000461328 FOXE3Q13461 319 aa12.07□□□□□ -0.48
VARS-219ENST00000461328 RTL8BQ17RB0 113 aa12.07□□□□□ -0.48
VARS-219ENST00000461328 ECSCRQ19T08 205 aa12.07□□□□□ -0.48
VARS-219ENST00000461328 TMEM69Q5SWH9 247 aa12.07□□□□□ -0.48
VARS-219ENST00000461328 FOXB2Q5VYV0 432 aa12.07□□□□□ -0.48
VARS-219ENST00000461328 LCNL1Q6ZST4 164 aa12.07□□□□□ -0.48
VARS-219ENST00000461328 C18orf65Q6ZTR6 163 aa12.07□□□□□ -0.48
VARS-219ENST00000461328 C8orf86Q6ZUL3 223 aa12.07□□□□□ -0.48
VARS-219ENST00000461328 BEST4Q8NFU0 473 aa12.07□□□□□ -0.48
VARS-219ENST00000461328 SLC25A46Q96AG3 418 aa12.07□□□□□ -0.48
VARS-219ENST00000461328 S100A16Q96FQ6 103 aaKnown RBP12.07□□□□□ -0.48
VARS-219ENST00000461328 RCC1LQ96I51 464 aaKnown RBP12.07□□□□□ -0.48
VARS-219ENST00000461328 HARBI1Q96MB7 349 aa12.07□□□□□ -0.48
VARS-219ENST00000461328 AUNIPQ9H7T9 357 aa12.07□□□□□ -0.48
VARS-219ENST00000461328 IFT46Q9NQC8 304 aa12.07□□□□□ -0.48
VARS-219ENST00000461328 NOTCH3Q9UM47 2321 aa12.06□□□□□ -0.48
VARS-219ENST00000461328 TRAV41A0A0B4J266 112 aa12.06□□□□□ -0.48
VARS-219ENST00000461328 SLC25A17O43808 307 aa12.06□□□□□ -0.48
VARS-219ENST00000461328 SPDEFO95238 335 aa12.06□□□□□ -0.48
VARS-219ENST00000461328 DUS4LO95620 317 aaKnown RBP12.06□□□□□ -0.48
VARS-219ENST00000461328 FCER2P06734 321 aa12.06□□□□□ -0.48
VARS-219ENST00000461328 ELANEP08246 267 aa12.06□□□□□ -0.48
VARS-219ENST00000461328 SLC6A1P30531 599 aa12.06□□□□□ -0.48
VARS-219ENST00000461328 PSG5Q15238 335 aa12.06□□□□□ -0.48
VARS-219ENST00000461328 TMEM65Q6PI78 240 aa12.06□□□□□ -0.48
VARS-219ENST00000461328 ETV3LQ6ZN32 361 aa12.06□□□□□ -0.48
VARS-219ENST00000461328 ZNF695Q8IW36 515 aa12.06□□□□□ -0.48
VARS-219ENST00000461328 GVQW1Q8N7I0 195 aa12.06□□□□□ -0.48
VARS-219ENST00000461328 LINC00482Q8N8I6 264 aa12.06□□□□□ -0.48
VARS-219ENST00000461328 KCTD12Q96CX2 325 aaKnown RBP12.06□□□□□ -0.48
VARS-219ENST00000461328 C5orf30Q96GV9 206 aa12.06□□□□□ -0.48
VARS-219ENST00000461328 ADTRPQ96IZ2 230 aa12.06□□□□□ -0.48
VARS-219ENST00000461328 MRPS26Q9BYN8 205 aaKnown RBP12.06□□□□□ -0.48
VARS-219ENST00000461328 ZNF580Q9UK33 172 aa12.06□□□□□ -0.48
VARS-219ENST00000461328 GAB2Q9UQC2 676 aa12.06□□□□□ -0.48
VARS-219ENST00000461328 OR2W1Q9Y3N9 320 aa12.06□□□□□ -0.48
VARS-219ENST00000461328 MEIS3P1A6NDR6 274 aa12.05□□□□□ -0.48
VARS-219ENST00000461328 G3V318 75 aa12.05□□□□□ -0.48
VARS-219ENST00000461328 SHOXO15266 292 aa12.05□□□□□ -0.48
VARS-219ENST00000461328 XRCC3O43542 346 aa12.05□□□□□ -0.48
VARS-219ENST00000461328 CA2P00918 260 aa12.05□□□□□ -0.48
VARS-219ENST00000461328 IGHG4P01861 327 aa12.05□□□□□ -0.48
VARS-219ENST00000461328 RRASP10301 218 aa12.05□□□□□ -0.48
VARS-219ENST00000461328 PTHLHP12272 177 aa12.05□□□□□ -0.48
VARS-219ENST00000461328 CBX5P45973 191 aa12.05□□□□□ -0.48
VARS-219ENST00000461328 RAB25P57735 213 aa12.05□□□□□ -0.48
VARS-219ENST00000461328 NDPQ00604 133 aa12.05□□□□□ -0.48
VARS-219ENST00000461328 TAGLNQ01995 201 aaKnown RBP12.05□□□□□ -0.48
VARS-219ENST00000461328 CFHR3Q02985 330 aa12.05□□□□□ -0.48
VARS-219ENST00000461328 ZNF660Q6AZW8 331 aaPredicted RBP12.05□□□□□ -0.48
VARS-219ENST00000461328 MRPL41Q8IXM3 137 aaKnown RBP12.05□□□□□ -0.48
VARS-219ENST00000461328 ZNF645Q8N7E2 425 aa12.05□□□□□ -0.48
VARS-219ENST00000461328 BVESQ8NE79 360 aa12.05□□□□□ -0.48
VARS-219ENST00000461328 MRAPQ8TCY5 172 aa12.05□□□□□ -0.48
VARS-219ENST00000461328 AURKAIP1Q9NWT8 199 aaPredicted RBP12.05□□□□□ -0.48
VARS-219ENST00000461328 COMMD3Q9UBI1 195 aa12.05□□□□□ -0.48
VARS-219ENST00000461328 A0A1W2PN81 502 aa12.04□□□□□ -0.48
VARS-219ENST00000461328 TUSC2O75896 110 aa12.04□□□□□ -0.48
VARS-219ENST00000461328 CHRNA7P36544 502 aa12.04□□□□□ -0.48
VARS-219ENST00000461328 MYCNOSP40205 109 aa12.04□□□□□ -0.48
VARS-219ENST00000461328 TAS2R20P59543 309 aa12.04□□□□□ -0.48
VARS-219ENST00000461328 GNB1P62873 340 aa12.04□□□□□ -0.48
VARS-219ENST00000461328 CX3CL1P78423 397 aa12.04□□□□□ -0.48
VARS-219ENST00000461328 GPR107Q5VW38 600 aa12.04□□□□□ -0.48
VARS-219ENST00000461328 GPR141Q7Z602 305 aa12.04□□□□□ -0.48
VARS-219ENST00000461328 HOGA1Q86XE5 327 aa12.04□□□□□ -0.48
VARS-219ENST00000461328 TPSG1Q9NRR2 321 aa12.04□□□□□ -0.48
VARS-219ENST00000461328 PRKDCP78527 4128 aaKnown RBP12.04□□□□□ -0.48
VARS-219ENST00000461328 FCN1O00602 326 aa12.03□□□□□ -0.48
VARS-219ENST00000461328 SLC22A5O76082 557 aa12.03□□□□□ -0.48
VARS-219ENST00000461328 GABARAPO95166 117 aa12.03□□□□□ -0.48
VARS-219ENST00000461328 CRYZL1O95825 349 aa12.03□□□□□ -0.48
VARS-219ENST00000461328 DUTP33316 252 aaKnown RBP12.03□□□□□ -0.48
VARS-219ENST00000461328 LGALS7P47929 136 aa12.03□□□□□ -0.48
VARS-219ENST00000461328 TMEM267Q0VDI3 215 aaPredicted RBP12.03□□□□□ -0.48
VARS-219ENST00000461328 KCTD9Q7L273 389 aa12.03□□□□□ -0.48
VARS-219ENST00000461328 ANKRD13BQ86YJ7 626 aa12.03□□□□□ -0.48
VARS-219ENST00000461328 GRPEL2Q8TAA5 225 aa12.03□□□□□ -0.48
VARS-219ENST00000461328 ARPC1AQ92747 370 aa12.03□□□□□ -0.48
VARS-219ENST00000461328 DPF1Q92782 380 aa12.03□□□□□ -0.48
VARS-219ENST00000461328 DUX3Q96PT4 197 aa12.03□□□□□ -0.48
VARS-219ENST00000461328 DCUN1D5Q9BTE7 237 aa12.03□□□□□ -0.48
VARS-219ENST00000461328 FAM103A1Q9BTL3 118 aaKnown RBP12.03□□□□□ -0.48
VARS-219ENST00000461328 GPR61Q9BZJ8 451 aa12.03□□□□□ -0.48
VARS-219ENST00000461328 NAA50Q9GZZ1 169 aaKnown RBP12.03□□□□□ -0.48
VARS-219ENST00000461328 MRPS7Q9Y2R9 242 aaKnown RBP12.03□□□□□ -0.48
VARS-219ENST00000461328 PRELID3BQ9Y3B1 194 aa12.03□□□□□ -0.48
VARS-219ENST00000461328 FBXO7Q9Y3I1 522 aa12.03□□□□□ -0.48
VARS-219ENST00000461328 IGKV1D-13A0A0B4J2D9 117 aa12.02□□□□□ -0.49
VARS-219ENST00000461328 SMIM31A0A1B0GVY4 71 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms