RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 NUTF2P61970 127 aaKnown RBP7.77□□□□□ -1.17
BRCA1-205ENST00000461221 CCL8P80075 99 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 FAM74A4Q5TZK3 123 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 SFRP2Q96HF1 295 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 ZNF488Q96MN9 340 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 PKIBQ9C010 78 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 KLK15Q9H2R5 256 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 OR5AC2Q9NZP5 309 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 FER1L6Q2WGJ9 1857 aa7.77□□□□□ -1.17
BRCA1-205ENST00000461221 DDX60Q8IY21 1712 aaKnown RBP7.76□□□□□ -1.17
BRCA1-205ENST00000461221 A0A1W2PPC1 479 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 TSPAN2O60636 221 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 ZNF414Q96IQ9 312 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 SH3BGRL3Q9H299 93 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 IGHV5-10-1A0A0J9YXX1 117 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 B4E171 279 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 THY1P04216 161 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 HOXB1P14653 301 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-205ENST00000461221 TSPAN7P41732 249 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 HBBP68871 147 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 AICDAQ9GZX7 198 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 TNFRSF18Q9Y5U5 241 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 ARL14EPLP0DKL9 152 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 OTX1P32242 354 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-205ENST00000461221 TMEM170BQ5T4T1 132 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 OR4D11Q8NGI4 311 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 RHOVQ96L33 236 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 JPT1Q9UK76 154 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 MRPS18BQ9Y676 258 aaKnown RBP7.76□□□□□ -1.17
BRCA1-205ENST00000461221 TGIF2-C20orf24A0A0A6YYL0 155 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 IGHV3-72A0A0B4J1Y9 119 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 PGLYRP1O75594 196 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-205ENST00000461221 CEACAM4O75871 244 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 ATP5LO75964 103 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 F12P00748 615 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-205ENST00000461221 CCL4P13236 92 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 DRD3P35462 400 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 FXYD3Q14802 87 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 CXorf66Q5JRM2 361 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-205ENST00000461221 FAM209BQ5JX69 171 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 LILRA6Q6PI73 481 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 TMEM91Q6ZNR0 172 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 WFIKKN1Q96NZ8 548 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 KCNK7Q9Y2U2 307 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 NPIPB11E5RHQ5 1161 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 NGFRP08138 427 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 RPS11P62280 158 aaKnown RBP eCLIP7.76□□□□□ -1.17
BRCA1-205ENST00000461221 SELENOHQ8IZQ5 122 aaKnown RBP7.76□□□□□ -1.17
BRCA1-205ENST00000461221 CALYQ9NYX4 217 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 DMRT1Q9Y5R6 373 aa7.76□□□□□ -1.17
BRCA1-205ENST00000461221 AHRRA9YTQ3 701 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 PF4P02776 101 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 CXCL2P19875 107 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 HOXA5P20719 270 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 LCN2P80188 198 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 FAM214BQ7L5A3 538 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 ITLN1Q8WWA0 313 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 TMEM186Q96B77 213 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 C19orf67A6NJJ6 358 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 VSIG10L2P0DP72 767 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 KLK2P20151 261 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 PSG4Q00888 419 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 C9orf40Q8IXQ3 194 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 SAXO1Q8IYX7 474 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 DCTN5Q9BTE1 182 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 GPR132Q9UNW8 380 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 RRHO14718 337 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 ZNF146Q15072 292 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 CFAP161Q6P656 301 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 ZNF784Q8NCA9 323 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-205ENST00000461221 GPR146Q96CH1 333 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 MS4A3Q96HJ5 214 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 SPAG8Q99932 426 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-205ENST00000461221 TMEM160Q9NX00 188 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 PSMB11A5LHX3 300 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 PRR33A8MZF0 331 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 ZNF79Q15937 498 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 FGFRL1Q8N441 504 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 OR9G1Q8NH87 305 aa7.75□□□□□ -1.17
BRCA1-205ENST00000461221 ZNF418Q8TF45 676 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-205ENST00000461221 ZNF385AQ96PM9 386 aaKnown RBP7.75□□□□□ -1.17
BRCA1-205ENST00000461221 A0A1B0GWB2 263 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 TMEM229AB2RXF0 380 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 SNRPCP09234 159 aaKnown RBP7.74□□□□□ -1.17
BRCA1-205ENST00000461221 CRYBB3P26998 211 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 ASIPP42127 132 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 TNFRSF9Q07011 255 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 LHX8Q68G74 356 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 ZNF721Q8TF20 911 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 ZNF729A6NN14 1252 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-205ENST00000461221 SLC25A20O43772 301 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 CNTFRP26992 372 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 UNC119Q13432 240 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 BIVMQ86UB2 503 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 PUSL1Q8N0Z8 303 aaKnown RBP7.74□□□□□ -1.17
BRCA1-205ENST00000461221 TPRX1Q8N7U7 411 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 HIST1H2BAQ96A08 127 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 SMIM8Q96KF7 97 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 PPIAL4CA0A0B4J2A2 164 aa7.74□□□□□ -1.17
BRCA1-205ENST00000461221 TRBV7-9A0A0J9YWB2 115 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms