RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 TUSC2O75896 110 aa12.92□□□□□ -0.34
SMARCD3-204ENST00000460431 APOA1P02647 267 aa12.92□□□□□ -0.34
SMARCD3-204ENST00000460431 EIF4EP06730 217 aaKnown RBP12.92□□□□□ -0.34
SMARCD3-204ENST00000460431 TAS2R20P59543 309 aa12.92□□□□□ -0.34
SMARCD3-204ENST00000460431 RPS16P62249 146 aaKnown RBP12.92□□□□□ -0.34
SMARCD3-204ENST00000460431 CFHR3Q02985 330 aa12.92□□□□□ -0.34
SMARCD3-204ENST00000460431 PSG5Q15238 335 aa12.92□□□□□ -0.34
SMARCD3-204ENST00000460431 TMEM69Q5SWH9 247 aa12.92□□□□□ -0.34
SMARCD3-204ENST00000460431 TEX38Q6PEX7 206 aa12.92□□□□□ -0.34
SMARCD3-204ENST00000460431 FLYWCH2Q96CP2 140 aaKnown RBP12.92□□□□□ -0.34
SMARCD3-204ENST00000460431 TSNAXQ99598 290 aaKnown RBP12.92□□□□□ -0.34
SMARCD3-204ENST00000460431 SLC35D1Q9NTN3 355 aa12.92□□□□□ -0.34
SMARCD3-204ENST00000460431 ZFP57Q9NU63 452 aa12.92□□□□□ -0.34
SMARCD3-204ENST00000460431 IGKV1D-13A0A0B4J2D9 117 aa12.91□□□□□ -0.34
SMARCD3-204ENST00000460431 J3QRK9 145 aa12.91□□□□□ -0.34
SMARCD3-204ENST00000460431 FCN1O00602 326 aa12.91□□□□□ -0.34
SMARCD3-204ENST00000460431 SLC22A5O76082 557 aa12.91□□□□□ -0.34
SMARCD3-204ENST00000460431 OR5H8P0DN80 308 aa12.91□□□□□ -0.34
SMARCD3-204ENST00000460431 IGKV1-13P0DP09 117 aa12.91□□□□□ -0.34
SMARCD3-204ENST00000460431 VDAC1P21796 283 aa12.91□□□□□ -0.34
SMARCD3-204ENST00000460431 DUTP33316 252 aaKnown RBP12.91□□□□□ -0.34
SMARCD3-204ENST00000460431 THBS3P49746 956 aa12.91□□□□□ -0.34
SMARCD3-204ENST00000460431 ARPC4P59998 168 aa12.91□□□□□ -0.34
SMARCD3-204ENST00000460431 RPL23AP62750 156 aaKnown RBP12.91□□□□□ -0.34
SMARCD3-204ENST00000460431 KHDC1LQ5JSQ8 128 aa12.91□□□□□ -0.34
SMARCD3-204ENST00000460431 ZNF660Q6AZW8 331 aaPredicted RBP12.91□□□□□ -0.34
SMARCD3-204ENST00000460431 C1QL4Q86Z23 238 aa12.91□□□□□ -0.34
SMARCD3-204ENST00000460431 ZNF645Q8N7E2 425 aa12.91□□□□□ -0.34
SMARCD3-204ENST00000460431 RNF152Q8N8N0 203 aa12.91□□□□□ -0.34
SMARCD3-204ENST00000460431 DDB2Q92466 427 aa12.91□□□□□ -0.34
SMARCD3-204ENST00000460431 SNAPC3Q92966 411 aa12.91□□□□□ -0.34
SMARCD3-204ENST00000460431 ADTRPQ96IZ2 230 aa12.91□□□□□ -0.34
SMARCD3-204ENST00000460431 LINC00473A8K010 186 aa12.9□□□□□ -0.34
SMARCD3-204ENST00000460431 ATP6V0E1O15342 81 aa12.9□□□□□ -0.34
SMARCD3-204ENST00000460431 SPDEFO95238 335 aa12.9□□□□□ -0.34
SMARCD3-204ENST00000460431 IGLV2-14P01704 120 aa12.9□□□□□ -0.34
SMARCD3-204ENST00000460431 IGHG4P01861 327 aa12.9□□□□□ -0.34
SMARCD3-204ENST00000460431 ELANEP08246 267 aa12.9□□□□□ -0.34
SMARCD3-204ENST00000460431 RRASP10301 218 aa12.9□□□□□ -0.34
SMARCD3-204ENST00000460431 ZNF182P17025 639 aaPredicted RBP12.9□□□□□ -0.34
SMARCD3-204ENST00000460431 PPIFP30405 207 aaKnown RBP12.9□□□□□ -0.34
SMARCD3-204ENST00000460431 LGALS7P47929 136 aa12.9□□□□□ -0.34
SMARCD3-204ENST00000460431 CX3CL1P78423 397 aa12.9□□□□□ -0.34
SMARCD3-204ENST00000460431 FOXE3Q13461 319 aa12.9□□□□□ -0.34
SMARCD3-204ENST00000460431 PLGLAQ15195 96 aa12.9□□□□□ -0.34
SMARCD3-204ENST00000460431 BVESQ8NE79 360 aa12.9□□□□□ -0.34
SMARCD3-204ENST00000460431 OR5AP2Q8NGF4 316 aa12.9□□□□□ -0.34
SMARCD3-204ENST00000460431 NECAP2Q9NVZ3 263 aa12.9□□□□□ -0.34
SMARCD3-204ENST00000460431 METTL1Q9UBP6 276 aaKnown RBP12.9□□□□□ -0.34
SMARCD3-204ENST00000460431 SMIM31A0A1B0GVY4 71 aa12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 MEIS3P1A6NDR6 274 aa12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 G3V318 75 aa12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 HPGDSO60760 199 aa12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 IGLV2-23P01705 113 aa12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 FCER2P06734 321 aa12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 PF4V1P10720 104 aa12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 ELK1P19419 428 aa12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 FCGR2CP31995 323 aa12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 PRSS3P35030 304 aa12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 RTL8BQ17RB0 113 aa12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 TMEM177Q53S58 311 aa12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 MZT2AQ6P582 158 aa12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 ZNF562Q6V9R5 426 aa12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 WFDC9Q8NEX5 89 aa12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 AP3S1Q92572 193 aa12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 PARP11Q9NR21 331 aa12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 ANAPC10Q9UM13 185 aa12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 RBMX2Q9Y388 322 aaKnown RBP12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 WSB1Q9Y6I7 421 aa12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 PRKDCP78527 4128 aaKnown RBP12.89□□□□□ -0.35
SMARCD3-204ENST00000460431 RPLP1P05386 114 aaKnown RBP12.88□□□□□ -0.35
SMARCD3-204ENST00000460431 CRYGBP07316 175 aa12.88□□□□□ -0.35
SMARCD3-204ENST00000460431 EGR2P11161 476 aaPredicted RBP12.88□□□□□ -0.35
SMARCD3-204ENST00000460431 NAT1P18440 290 aa12.88□□□□□ -0.35
SMARCD3-204ENST00000460431 PSMB8P28062 276 aa12.88□□□□□ -0.35
SMARCD3-204ENST00000460431 SLC6A1P30531 599 aa12.88□□□□□ -0.35
SMARCD3-204ENST00000460431 RPL5P46777 297 aaKnown RBP12.88□□□□□ -0.35
SMARCD3-204ENST00000460431 CRIP2P52943 208 aaPredicted RBP12.88□□□□□ -0.35
SMARCD3-204ENST00000460431 NDPQ00604 133 aa12.88□□□□□ -0.35
SMARCD3-204ENST00000460431 CBX3Q13185 183 aa12.88□□□□□ -0.35
SMARCD3-204ENST00000460431 CXorf66Q5JRM2 361 aaPredicted RBP12.88□□□□□ -0.35
SMARCD3-204ENST00000460431 GIMAP1Q8WWP7 306 aa12.88□□□□□ -0.35
SMARCD3-204ENST00000460431 IFT46Q9NQC8 304 aa12.88□□□□□ -0.35
SMARCD3-204ENST00000460431 MRPS7Q9Y2R9 242 aaKnown RBP12.88□□□□□ -0.35
SMARCD3-204ENST00000460431 NUBP2Q9Y5Y2 271 aa12.88□□□□□ -0.35
SMARCD3-204ENST00000460431 TRAV41A0A0B4J266 112 aa12.87□□□□□ -0.35
SMARCD3-204ENST00000460431 SRRM4A7MD48 611 aaKnown RBP12.87□□□□□ -0.35
SMARCD3-204ENST00000460431 SHOXO15266 292 aa12.87□□□□□ -0.35
SMARCD3-204ENST00000460431 SLC25A17O43808 307 aa12.87□□□□□ -0.35
SMARCD3-204ENST00000460431 PPYP01298 95 aa12.87□□□□□ -0.35
SMARCD3-204ENST00000460431 AADACP22760 399 aa12.87□□□□□ -0.35
SMARCD3-204ENST00000460431 EIF4EBP1Q13541 118 aaPredicted RBP12.87□□□□□ -0.35
SMARCD3-204ENST00000460431 CDK10Q15131 360 aa12.87□□□□□ -0.35
SMARCD3-204ENST00000460431 MSMO1Q15800 293 aa12.87□□□□□ -0.35
SMARCD3-204ENST00000460431 C19orf54Q5BKX5 351 aa12.87□□□□□ -0.35
SMARCD3-204ENST00000460431 LCNL1Q6ZST4 164 aa12.87□□□□□ -0.35
SMARCD3-204ENST00000460431 C18orf65Q6ZTR6 163 aa12.87□□□□□ -0.35
SMARCD3-204ENST00000460431 CLVS1Q8IUQ0 354 aaPredicted RBP12.87□□□□□ -0.35
SMARCD3-204ENST00000460431 MINDY2Q8NBR6 621 aa12.87□□□□□ -0.35
SMARCD3-204ENST00000460431 GPX8Q8TED1 209 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms