RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 IGSF11Q5DX21 431 aa16.25■□□□□ 0.19
SRM-202ENST00000459997 C9orf66Q5T8R8 295 aa16.25■□□□□ 0.19
SRM-202ENST00000459997 MAFIPQ8WZ33 124 aa16.25■□□□□ 0.19
SRM-202ENST00000459997 CLCC1Q96S66 551 aa16.25■□□□□ 0.19
SRM-202ENST00000459997 FOXA2Q9Y261 457 aaPredicted RBP16.25■□□□□ 0.19
SRM-202ENST00000459997 COL7A1Q02388 2944 aa16.25■□□□□ 0.19
SRM-202ENST00000459997 METTL21EPA6NDL7 271 aa16.24■□□□□ 0.19
SRM-202ENST00000459997 SEC14L6B5MCN3 397 aa16.24■□□□□ 0.19
SRM-202ENST00000459997 I3L521 148 aa16.24■□□□□ 0.19
SRM-202ENST00000459997 M0R1X1 148 aa16.24■□□□□ 0.19
SRM-202ENST00000459997 APOA2P02652 100 aa16.24■□□□□ 0.19
SRM-202ENST00000459997 GSTT2P0CG29 244 aa16.24■□□□□ 0.19
SRM-202ENST00000459997 GSTT2BP0CG30 244 aa16.24■□□□□ 0.19
SRM-202ENST00000459997 GNB1P62873 340 aa16.24■□□□□ 0.19
SRM-202ENST00000459997 RUNX1Q01196 453 aa16.24■□□□□ 0.19
SRM-202ENST00000459997 PSG5Q15238 335 aa16.24■□□□□ 0.19
SRM-202ENST00000459997 SFXN4Q6P4A7 337 aa16.24■□□□□ 0.19
SRM-202ENST00000459997 PDPNQ86YL7 162 aa16.24■□□□□ 0.19
SRM-202ENST00000459997 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.24■□□□□ 0.19
SRM-202ENST00000459997 OR1N2Q8NGR9 330 aa16.24■□□□□ 0.19
SRM-202ENST00000459997 OR10J5Q8NHC4 309 aa16.24■□□□□ 0.19
SRM-202ENST00000459997 TSNAXQ99598 290 aaKnown RBP16.24■□□□□ 0.19
SRM-202ENST00000459997 CABLES2Q9BTV7 478 aa16.24■□□□□ 0.19
SRM-202ENST00000459997 TOLLIPQ9H0E2 274 aa16.24■□□□□ 0.19
SRM-202ENST00000459997 OR2D2Q9H210 308 aa16.24■□□□□ 0.19
SRM-202ENST00000459997 VCX3AQ9NNX9 186 aa16.24■□□□□ 0.19
SRM-202ENST00000459997 ZNF230Q9UIE0 474 aaPredicted RBP16.24■□□□□ 0.19
SRM-202ENST00000459997 GAB2Q9UQC2 676 aa16.24■□□□□ 0.19
SRM-202ENST00000459997 SOX15O60248 233 aa16.23■□□□□ 0.19
SRM-202ENST00000459997 OR8U8P0C7N1 319 aa16.23■□□□□ 0.19
SRM-202ENST00000459997 OR8U9P0C7N5 309 aa16.23■□□□□ 0.19
SRM-202ENST00000459997 EGR2P11161 476 aaPredicted RBP16.23■□□□□ 0.19
SRM-202ENST00000459997 RPS16P62249 146 aaKnown RBP16.23■□□□□ 0.19
SRM-202ENST00000459997 ZNF616Q08AN1 781 aa16.23■□□□□ 0.19
SRM-202ENST00000459997 ARFRP1Q13795 201 aa16.23■□□□□ 0.19
SRM-202ENST00000459997 TCTEX1D1Q8N7M0 179 aa16.23■□□□□ 0.19
SRM-202ENST00000459997 CASTOR1Q8WTX7 329 aa16.23■□□□□ 0.19
SRM-202ENST00000459997 ATG5Q9H1Y0 275 aa16.23■□□□□ 0.19
SRM-202ENST00000459997 TRBV6-7A0A0A0MS04 114 aa16.22■□□□□ 0.19
SRM-202ENST00000459997 RAMP3O60896 148 aa16.22■□□□□ 0.19
SRM-202ENST00000459997 SPDEFO95238 335 aa16.22■□□□□ 0.19
SRM-202ENST00000459997 CA2P00918 260 aa16.22■□□□□ 0.19
SRM-202ENST00000459997 SMIM18P0DKX4 95 aa16.22■□□□□ 0.19
SRM-202ENST00000459997 TALDO1P37837 337 aa16.22■□□□□ 0.19
SRM-202ENST00000459997 LSM3P62310 102 aaKnown RBP16.22■□□□□ 0.19
SRM-202ENST00000459997 TMEM267Q0VDI3 215 aaPredicted RBP16.22■□□□□ 0.19
SRM-202ENST00000459997 ASPHD1Q5U4P2 390 aa16.22■□□□□ 0.19
SRM-202ENST00000459997 PPP1R27Q86WC6 154 aa16.22■□□□□ 0.19
SRM-202ENST00000459997 LGALS14Q8TCE9 139 aa16.22■□□□□ 0.19
SRM-202ENST00000459997 FLYWCH2Q96CP2 140 aaKnown RBP16.22■□□□□ 0.19
SRM-202ENST00000459997 FAM103A1Q9BTL3 118 aaKnown RBP16.22■□□□□ 0.19
SRM-202ENST00000459997 SLC35D1Q9NTN3 355 aa16.22■□□□□ 0.19
SRM-202ENST00000459997 NUBP2Q9Y5Y2 271 aa16.22■□□□□ 0.19
SRM-202ENST00000459997 AIREO43918 545 aa16.21■□□□□ 0.19
SRM-202ENST00000459997 DIRAS3O95661 229 aa16.21■□□□□ 0.19
SRM-202ENST00000459997 CD69Q07108 199 aa16.21■□□□□ 0.19
SRM-202ENST00000459997 DCTN2Q13561 401 aaKnown RBP16.21■□□□□ 0.19
SRM-202ENST00000459997 ZNF260Q3ZCT1 412 aa16.21■□□□□ 0.19
SRM-202ENST00000459997 ACTBL2Q562R1 376 aa16.21■□□□□ 0.19
SRM-202ENST00000459997 UNQ5815/PRO19632Q6UWF5 114 aa16.21■□□□□ 0.19
SRM-202ENST00000459997 ZNF562Q6V9R5 426 aa16.21■□□□□ 0.19
SRM-202ENST00000459997 GINS4Q9BRT9 223 aa16.21■□□□□ 0.19
SRM-202ENST00000459997 ALX4Q9H161 411 aaPredicted RBP16.21■□□□□ 0.19
SRM-202ENST00000459997 TPSG1Q9NRR2 321 aa16.21■□□□□ 0.19
SRM-202ENST00000459997 SDHAF2Q9NX18 166 aa16.21■□□□□ 0.19
SRM-202ENST00000459997 ELF5Q9UKW6 265 aaPredicted RBP16.21■□□□□ 0.19
SRM-202ENST00000459997 SLC25A17O43808 307 aa16.2■□□□□ 0.18
SRM-202ENST00000459997 TIMM50Q3ZCQ8 353 aa16.2■□□□□ 0.18
SRM-202ENST00000459997 IDNKQ5T6J7 187 aa16.2■□□□□ 0.18
SRM-202ENST00000459997 PYHIN1Q6K0P9 492 aa16.2■□□□□ 0.18
SRM-202ENST00000459997 LFNGQ8NES3 379 aa16.2■□□□□ 0.18
SRM-202ENST00000459997 OR5H6Q8NGV6 325 aa16.2■□□□□ 0.18
SRM-202ENST00000459997 SCOCQ9UIL1 159 aa16.2■□□□□ 0.18
SRM-202ENST00000459997 RBM7Q9Y580 266 aaKnown RBP16.2■□□□□ 0.18
SRM-202ENST00000459997 ECI1P42126 302 aa16.19■□□□□ 0.18
SRM-202ENST00000459997 ARL6IP1Q15041 203 aa16.19■□□□□ 0.18
SRM-202ENST00000459997 AKIRIN2Q53H80 203 aa16.19■□□□□ 0.18
SRM-202ENST00000459997 C11orf87Q6NUJ2 197 aa16.19■□□□□ 0.18
SRM-202ENST00000459997 GRPEL2Q8TAA5 225 aa16.19■□□□□ 0.18
SRM-202ENST00000459997 ARPC1AQ92747 370 aa16.19■□□□□ 0.18
SRM-202ENST00000459997 PRR25Q96S07 402 aa16.19■□□□□ 0.18
SRM-202ENST00000459997 B9D2Q9BPU9 175 aa16.19■□□□□ 0.18
SRM-202ENST00000459997 LGALS1P09382 135 aaKnown RBP16.18■□□□□ 0.18
SRM-202ENST00000459997 FXYD3Q14802 87 aa16.18■□□□□ 0.18
SRM-202ENST00000459997 SRSF7Q16629 238 aaKnown RBP eCLIP16.18■□□□□ 0.18
SRM-202ENST00000459997 Q6ZS49 121 aa16.18■□□□□ 0.18
SRM-202ENST00000459997 SLC25A38Q96DW6 304 aa16.18■□□□□ 0.18
SRM-202ENST00000459997 C5orf30Q96GV9 206 aa16.18■□□□□ 0.18
SRM-202ENST00000459997 MS4A10Q96PG2 267 aa16.18■□□□□ 0.18
SRM-202ENST00000459997 FUNDC2Q9BWH2 189 aa16.18■□□□□ 0.18
SRM-202ENST00000459997 IGKV1D-8A0A087WSZ0 117 aa16.17■□□□□ 0.18
SRM-202ENST00000459997 CD40LGP29965 261 aa16.17■□□□□ 0.18
SRM-202ENST00000459997 RPS19P39019 145 aaKnown RBP16.17■□□□□ 0.18
SRM-202ENST00000459997 TPPP2P59282 170 aa16.17■□□□□ 0.18
SRM-202ENST00000459997 CBX3Q13185 183 aa16.17■□□□□ 0.18
SRM-202ENST00000459997 CDNFQ49AH0 187 aa16.17■□□□□ 0.18
SRM-202ENST00000459997 VAX1Q5SQQ9 334 aa16.17■□□□□ 0.18
SRM-202ENST00000459997 OR13F1Q8NGS4 319 aa16.17■□□□□ 0.18
SRM-202ENST00000459997 DCUN1D4Q92564 292 aa16.17■□□□□ 0.18
SRM-202ENST00000459997 HARBI1Q96MB7 349 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms