RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 PDPNQ86YL7 162 aa12.61□□□□□ -0.39
COL7A1-203ENST00000459756 OR8U1Q8NH10 309 aa12.61□□□□□ -0.39
COL7A1-203ENST00000459756 TSNAXQ99598 290 aaKnown RBP12.61□□□□□ -0.39
COL7A1-203ENST00000459756 GINS4Q9BRT9 223 aa12.61□□□□□ -0.39
COL7A1-203ENST00000459756 MCRIP2Q9BUT9 160 aaKnown RBP12.61□□□□□ -0.39
COL7A1-203ENST00000459756 OR2D2Q9H210 308 aa12.61□□□□□ -0.39
COL7A1-203ENST00000459756 ETV7Q9Y603 341 aa12.61□□□□□ -0.39
COL7A1-203ENST00000459756 WSB1Q9Y6I7 421 aa12.61□□□□□ -0.39
COL7A1-203ENST00000459756 G3V318 75 aa12.6□□□□□ -0.39
COL7A1-203ENST00000459756 CCL24O00175 119 aa12.6□□□□□ -0.39
COL7A1-203ENST00000459756 SPDEFO95238 335 aa12.6□□□□□ -0.39
COL7A1-203ENST00000459756 IGLV1-40P01703 118 aa12.6□□□□□ -0.39
COL7A1-203ENST00000459756 IGKV1-16P04430 117 aa12.6□□□□□ -0.39
COL7A1-203ENST00000459756 PITPNAQ00169 270 aa12.6□□□□□ -0.39
COL7A1-203ENST00000459756 TMEM65Q6PI78 240 aa12.6□□□□□ -0.39
COL7A1-203ENST00000459756 MYOZ3Q8TDC0 251 aa12.6□□□□□ -0.39
COL7A1-203ENST00000459756 RAX2Q96IS3 184 aa12.6□□□□□ -0.39
COL7A1-203ENST00000459756 DCSTAMPQ9H295 470 aa12.6□□□□□ -0.39
COL7A1-203ENST00000459756 SDHAF2Q9NX18 166 aa12.6□□□□□ -0.39
COL7A1-203ENST00000459756 RHBDL2Q9NX52 303 aa12.6□□□□□ -0.39
COL7A1-203ENST00000459756 ELF5Q9UKW6 265 aaPredicted RBP12.6□□□□□ -0.39
COL7A1-203ENST00000459756 IGKV1D-8A0A087WSZ0 117 aa12.59□□□□□ -0.39
COL7A1-203ENST00000459756 TMEM235A6NFC5 223 aa12.59□□□□□ -0.39
COL7A1-203ENST00000459756 NOL3O60936 208 aaKnown RBP12.59□□□□□ -0.39
COL7A1-203ENST00000459756 TMEM127O75204 238 aa12.59□□□□□ -0.39
COL7A1-203ENST00000459756 CRIP2P52943 208 aaPredicted RBP12.59□□□□□ -0.39
COL7A1-203ENST00000459756 LINC00205P59089 165 aa12.59□□□□□ -0.39
COL7A1-203ENST00000459756 RPS16P62249 146 aaKnown RBP12.59□□□□□ -0.39
COL7A1-203ENST00000459756 CX3CL1P78423 397 aa12.59□□□□□ -0.39
COL7A1-203ENST00000459756 TAGLNQ01995 201 aaKnown RBP12.59□□□□□ -0.39
COL7A1-203ENST00000459756 PSG5Q15238 335 aa12.59□□□□□ -0.39
COL7A1-203ENST00000459756 CTF1Q16619 201 aa12.59□□□□□ -0.39
COL7A1-203ENST00000459756 H1FOOQ8IZA3 346 aaPredicted RBP12.59□□□□□ -0.39
COL7A1-203ENST00000459756 MINDY2Q8NBR6 621 aa12.59□□□□□ -0.39
COL7A1-203ENST00000459756 OR5H6Q8NGV6 325 aa12.59□□□□□ -0.39
COL7A1-203ENST00000459756 C4orf3Q8WVX3 66 aa12.59□□□□□ -0.39
COL7A1-203ENST00000459756 FLYWCH2Q96CP2 140 aaKnown RBP12.59□□□□□ -0.39
COL7A1-203ENST00000459756 ST6GALNAC5Q9BVH7 336 aa12.59□□□□□ -0.39
COL7A1-203ENST00000459756 SLC35D1Q9NTN3 355 aa12.59□□□□□ -0.39
COL7A1-203ENST00000459756 AURKAIP1Q9NWT8 199 aaPredicted RBP12.59□□□□□ -0.39
COL7A1-203ENST00000459756 METTL1Q9UBP6 276 aaKnown RBP12.59□□□□□ -0.39
COL7A1-203ENST00000459756 RBM7Q9Y580 266 aaKnown RBP12.59□□□□□ -0.39
COL7A1-203ENST00000459756 CCDC160A6NGH7 325 aa12.58□□□□□ -0.4
COL7A1-203ENST00000459756 FCN1O00602 326 aa12.58□□□□□ -0.4
COL7A1-203ENST00000459756 CTXN2P0C2S0 81 aa12.58□□□□□ -0.4
COL7A1-203ENST00000459756 GNG2P59768 71 aa12.58□□□□□ -0.4
COL7A1-203ENST00000459756 NDPQ00604 133 aa12.58□□□□□ -0.4
COL7A1-203ENST00000459756 ZNF260Q3ZCT1 412 aa12.58□□□□□ -0.4
COL7A1-203ENST00000459756 C19orf54Q5BKX5 351 aa12.58□□□□□ -0.4
COL7A1-203ENST00000459756 TCTEX1D1Q8N7M0 179 aa12.58□□□□□ -0.4
COL7A1-203ENST00000459756 DPF1Q92782 380 aa12.58□□□□□ -0.4
COL7A1-203ENST00000459756 UBE2E2Q96LR5 201 aa12.58□□□□□ -0.4
COL7A1-203ENST00000459756 DUX3Q96PT4 197 aa12.58□□□□□ -0.4
COL7A1-203ENST00000459756 KLK15Q9H2R5 256 aa12.58□□□□□ -0.4
COL7A1-203ENST00000459756 A0A0A6YYH2 397 aa12.57□□□□□ -0.4
COL7A1-203ENST00000459756 A6NJ64 397 aa12.57□□□□□ -0.4
COL7A1-203ENST00000459756 EGFEM1PQ0D2K5 195 aa12.57□□□□□ -0.4
COL7A1-203ENST00000459756 TMEM267Q0VDI3 215 aaPredicted RBP12.57□□□□□ -0.4
COL7A1-203ENST00000459756 CBX3Q13185 183 aa12.57□□□□□ -0.4
COL7A1-203ENST00000459756 ECSCRQ19T08 205 aa12.57□□□□□ -0.4
COL7A1-203ENST00000459756 DEFB136Q30KP8 78 aa12.57□□□□□ -0.4
COL7A1-203ENST00000459756 ZNF562Q6V9R5 426 aa12.57□□□□□ -0.4
COL7A1-203ENST00000459756 CROCCP3Q8IVE0 287 aa12.57□□□□□ -0.4
COL7A1-203ENST00000459756 MRAPQ8TCY5 172 aa12.57□□□□□ -0.4
COL7A1-203ENST00000459756 ABHD5Q8WTS1 349 aa12.57□□□□□ -0.4
COL7A1-203ENST00000459756 NUDCD2Q8WVJ2 157 aa12.57□□□□□ -0.4
COL7A1-203ENST00000459756 SLC25A46Q96AG3 418 aa12.57□□□□□ -0.4
COL7A1-203ENST00000459756 SLC25A38Q96DW6 304 aa12.57□□□□□ -0.4
COL7A1-203ENST00000459756 ADTRPQ96IZ2 230 aa12.57□□□□□ -0.4
COL7A1-203ENST00000459756 FOXA2Q9Y261 457 aaPredicted RBP12.57□□□□□ -0.4
COL7A1-203ENST00000459756 VSIG4Q9Y279 399 aa12.57□□□□□ -0.4
COL7A1-203ENST00000459756 FBXO7Q9Y3I1 522 aa12.57□□□□□ -0.4
COL7A1-203ENST00000459756 NUBP2Q9Y5Y2 271 aa12.57□□□□□ -0.4
COL7A1-203ENST00000459756 RRASP10301 218 aa12.56□□□□□ -0.4
COL7A1-203ENST00000459756 LGALS7P47929 136 aa12.56□□□□□ -0.4
COL7A1-203ENST00000459756 RAB9AP51151 201 aa12.56□□□□□ -0.4
COL7A1-203ENST00000459756 RAB25P57735 213 aa12.56□□□□□ -0.4
COL7A1-203ENST00000459756 KIAA0141Q14154 515 aaPredicted RBP12.56□□□□□ -0.4
COL7A1-203ENST00000459756 SPCS2Q15005 226 aa12.56□□□□□ -0.4
COL7A1-203ENST00000459756 RTL8BQ17RB0 113 aa12.56□□□□□ -0.4
COL7A1-203ENST00000459756 AKIRIN2Q53H80 203 aa12.56□□□□□ -0.4
COL7A1-203ENST00000459756 CNIH2Q6PI25 160 aa12.56□□□□□ -0.4
COL7A1-203ENST00000459756 PPP1R27Q86WC6 154 aa12.56□□□□□ -0.4
COL7A1-203ENST00000459756 ZNF491Q8N8L2 437 aa12.56□□□□□ -0.4
COL7A1-203ENST00000459756 C5orf30Q96GV9 206 aa12.56□□□□□ -0.4
COL7A1-203ENST00000459756 CLCC1Q96S66 551 aa12.56□□□□□ -0.4
COL7A1-203ENST00000459756 A3GALT2U3KPV4 340 aa12.56□□□□□ -0.4
COL7A1-203ENST00000459756 A0A1W2PN81 502 aa12.55□□□□□ -0.4
COL7A1-203ENST00000459756 SLC25A17O43808 307 aa12.55□□□□□ -0.4
COL7A1-203ENST00000459756 SSX5O60225 188 aa12.55□□□□□ -0.4
COL7A1-203ENST00000459756 CA2P00918 260 aa12.55□□□□□ -0.4
COL7A1-203ENST00000459756 EGR2P11161 476 aaPredicted RBP12.55□□□□□ -0.4
COL7A1-203ENST00000459756 CHRNA7P36544 502 aa12.55□□□□□ -0.4
COL7A1-203ENST00000459756 RUNX1Q01196 453 aa12.55□□□□□ -0.4
COL7A1-203ENST00000459756 FHL3Q13643 280 aa12.55□□□□□ -0.4
COL7A1-203ENST00000459756 PYHIN1Q6K0P9 492 aa12.55□□□□□ -0.4
COL7A1-203ENST00000459756 OR5M8Q8NGP6 311 aa12.55□□□□□ -0.4
COL7A1-203ENST00000459756 RAB2BQ8WUD1 216 aa12.55□□□□□ -0.4
COL7A1-203ENST00000459756 GNB4Q9HAV0 340 aa12.55□□□□□ -0.4
COL7A1-203ENST00000459756 DIABLOQ9NR28 239 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms