RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 PTHLHP12272 177 aa16.32■□□□□ 0.2
VARS-218ENST00000459667 PRSS3P35030 304 aa16.32■□□□□ 0.2
VARS-218ENST00000459667 PLGLAQ15195 96 aa16.32■□□□□ 0.2
VARS-218ENST00000459667 LIN54Q6MZP7 749 aa16.32■□□□□ 0.2
VARS-218ENST00000459667 GVQW1Q8N7I0 195 aa16.32■□□□□ 0.2
VARS-218ENST00000459667 RNF5Q99942 180 aa16.32■□□□□ 0.2
VARS-218ENST00000459667 FBXL15Q9H469 300 aa16.32■□□□□ 0.2
VARS-218ENST00000459667 SLC35D1Q9NTN3 355 aa16.32■□□□□ 0.2
VARS-218ENST00000459667 MRPS7Q9Y2R9 242 aaKnown RBP16.32■□□□□ 0.2
VARS-218ENST00000459667 CCDC160A6NGH7 325 aa16.31■□□□□ 0.2
VARS-218ENST00000459667 J3QRK9 145 aa16.31■□□□□ 0.2
VARS-218ENST00000459667 IGKV1-16P04430 117 aa16.31■□□□□ 0.2
VARS-218ENST00000459667 IGF1P05019 195 aa16.31■□□□□ 0.2
VARS-218ENST00000459667 ELK1P19419 428 aa16.31■□□□□ 0.2
VARS-218ENST00000459667 VDAC1P21796 283 aa16.31■□□□□ 0.2
VARS-218ENST00000459667 NFYAP23511 347 aaPredicted RBP16.31■□□□□ 0.2
VARS-218ENST00000459667 ISOC1Q96CN7 298 aa16.31■□□□□ 0.2
VARS-218ENST00000459667 OR51J1Q9H342 316 aa16.31■□□□□ 0.2
VARS-218ENST00000459667 CCDC59Q9P031 241 aaKnown RBP16.31■□□□□ 0.2
VARS-218ENST00000459667 ADAM30Q9UKF2 790 aa16.31■□□□□ 0.2
VARS-218ENST00000459667 OR2W1Q9Y3N9 320 aa16.31■□□□□ 0.2
VARS-218ENST00000459667 IGHV7-81A0A0B4J1V7 117 aa16.3■□□□□ 0.2
VARS-218ENST00000459667 ATP6V0E1O15342 81 aa16.3■□□□□ 0.2
VARS-218ENST00000459667 THBS3P49746 956 aa16.3■□□□□ 0.2
VARS-218ENST00000459667 LUMP51884 338 aaPredicted RBP16.3■□□□□ 0.2
VARS-218ENST00000459667 RPS16P62249 146 aaKnown RBP16.3■□□□□ 0.2
VARS-218ENST00000459667 TEX38Q6PEX7 206 aa16.3■□□□□ 0.2
VARS-218ENST00000459667 TSNAXQ99598 290 aaKnown RBP16.3■□□□□ 0.2
VARS-218ENST00000459667 PARP11Q9NR21 331 aa16.3■□□□□ 0.2
VARS-218ENST00000459667 NECAP2Q9NVZ3 263 aa16.3■□□□□ 0.2
VARS-218ENST00000459667 ZNF580Q9UK33 172 aa16.3■□□□□ 0.2
VARS-218ENST00000459667 MEIS3P1A6NDR6 274 aa16.29■□□□□ 0.2
VARS-218ENST00000459667 H3BMQ9 156 aa16.29■□□□□ 0.2
VARS-218ENST00000459667 RGS5O15539 181 aa16.29■□□□□ 0.2
VARS-218ENST00000459667 SLC22A5O76082 557 aa16.29■□□□□ 0.2
VARS-218ENST00000459667 RPL23AP62750 156 aaKnown RBP16.29■□□□□ 0.2
VARS-218ENST00000459667 PSG5Q15238 335 aa16.29■□□□□ 0.2
VARS-218ENST00000459667 ZNF645Q8N7E2 425 aa16.29■□□□□ 0.2
VARS-218ENST00000459667 C15orf40Q8WUR7 153 aa16.29■□□□□ 0.2
VARS-218ENST00000459667 FLYWCH2Q96CP2 140 aaKnown RBP16.29■□□□□ 0.2
VARS-218ENST00000459667 SCPEP1Q9HB40 452 aa16.29■□□□□ 0.2
VARS-218ENST00000459667 METTL1Q9UBP6 276 aaKnown RBP16.29■□□□□ 0.2
VARS-218ENST00000459667 SPDEFO95238 335 aa16.28■□□□□ 0.2
VARS-218ENST00000459667 HLA-DQB1P01920 261 aa16.28■□□□□ 0.2
VARS-218ENST00000459667 FCER2P06734 321 aa16.28■□□□□ 0.2
VARS-218ENST00000459667 OR5H8P0DN80 308 aa16.28■□□□□ 0.2
VARS-218ENST00000459667 TAGLNQ01995 201 aaKnown RBP16.28■□□□□ 0.2
VARS-218ENST00000459667 CFHR3Q02985 330 aa16.28■□□□□ 0.2
VARS-218ENST00000459667 CBX3Q13185 183 aa16.28■□□□□ 0.2
VARS-218ENST00000459667 OR5AP2Q8NGF4 316 aa16.28■□□□□ 0.2
VARS-218ENST00000459667 DYNC2LI1Q8TCX1 351 aa16.28■□□□□ 0.2
VARS-218ENST00000459667 ADTRPQ96IZ2 230 aa16.28■□□□□ 0.2
VARS-218ENST00000459667 ZFP57Q9NU63 452 aa16.28■□□□□ 0.2
VARS-218ENST00000459667 EXTL2Q9UBQ6 330 aa16.28■□□□□ 0.2
VARS-218ENST00000459667 CEPT1Q9Y6K0 416 aa16.28■□□□□ 0.2
VARS-218ENST00000459667 IGKV1D-13A0A0B4J2D9 117 aa16.27■□□□□ 0.2
VARS-218ENST00000459667 TUSC2O75896 110 aa16.27■□□□□ 0.2
VARS-218ENST00000459667 TPPPO94811 219 aa16.27■□□□□ 0.2
VARS-218ENST00000459667 PF4P02776 101 aa16.27■□□□□ 0.2
VARS-218ENST00000459667 ELANEP08246 267 aa16.27■□□□□ 0.2
VARS-218ENST00000459667 IGKV1-13P0DP09 117 aa16.27■□□□□ 0.2
VARS-218ENST00000459667 DUTP33316 252 aaKnown RBP16.27■□□□□ 0.2
VARS-218ENST00000459667 TAS2R46P59540 309 aa16.27■□□□□ 0.2
VARS-218ENST00000459667 NDPQ00604 133 aa16.27■□□□□ 0.2
VARS-218ENST00000459667 FOXE3Q13461 319 aa16.27■□□□□ 0.2
VARS-218ENST00000459667 CDK10Q15131 360 aa16.27■□□□□ 0.2
VARS-218ENST00000459667 RTL8BQ17RB0 113 aa16.27■□□□□ 0.2
VARS-218ENST00000459667 CXorf66Q5JRM2 361 aaPredicted RBP16.27■□□□□ 0.2
VARS-218ENST00000459667 SNX29P2Q8IUI4 249 aa16.27■□□□□ 0.2
VARS-218ENST00000459667 BVESQ8NE79 360 aa16.27■□□□□ 0.2
VARS-218ENST00000459667 SNAPC3Q92966 411 aa16.27■□□□□ 0.2
VARS-218ENST00000459667 WSB1Q9Y6I7 421 aa16.27■□□□□ 0.2
VARS-218ENST00000459667 PLXNB1O43157 2135 aa16.27■□□□□ 0.19
VARS-218ENST00000459667 NUDT19A8MXV4 375 aa16.26■□□□□ 0.19
VARS-218ENST00000459667 SULT1C2O00338 296 aa16.26■□□□□ 0.19
VARS-218ENST00000459667 IGHG4P01861 327 aa16.26■□□□□ 0.19
VARS-218ENST00000459667 RPLP1P05386 114 aaKnown RBP16.26■□□□□ 0.19
VARS-218ENST00000459667 RRASP10301 218 aa16.26■□□□□ 0.19
VARS-218ENST00000459667 FCGR2CP31995 323 aa16.26■□□□□ 0.19
VARS-218ENST00000459667 CX3CL1P78423 397 aa16.26■□□□□ 0.19
VARS-218ENST00000459667 ZNF660Q6AZW8 331 aaPredicted RBP16.26■□□□□ 0.19
VARS-218ENST00000459667 C1QL4Q86Z23 238 aa16.26■□□□□ 0.19
VARS-218ENST00000459667 DDB2Q92466 427 aa16.26■□□□□ 0.19
VARS-218ENST00000459667 HARBI1Q96MB7 349 aa16.26■□□□□ 0.19
VARS-218ENST00000459667 CLCC1Q96S66 551 aa16.26■□□□□ 0.19
VARS-218ENST00000459667 ANAPC10Q9UM13 185 aa16.26■□□□□ 0.19
VARS-218ENST00000459667 TRAV41A0A0B4J266 112 aa16.25■□□□□ 0.19
VARS-218ENST00000459667 LINC00473A8K010 186 aa16.25■□□□□ 0.19
VARS-218ENST00000459667 G3V318 75 aa16.25■□□□□ 0.19
VARS-218ENST00000459667 FCN1O00602 326 aa16.25■□□□□ 0.19
VARS-218ENST00000459667 SLC25A17O43808 307 aa16.25■□□□□ 0.19
VARS-218ENST00000459667 LGALS7P47929 136 aa16.25■□□□□ 0.19
VARS-218ENST00000459667 ECSCRQ19T08 205 aa16.25■□□□□ 0.19
VARS-218ENST00000459667 TMEM177Q53S58 311 aa16.25■□□□□ 0.19
VARS-218ENST00000459667 LCNL1Q6ZST4 164 aa16.25■□□□□ 0.19
VARS-218ENST00000459667 C18orf65Q6ZTR6 163 aa16.25■□□□□ 0.19
VARS-218ENST00000459667 KLHL30-AS1Q8NEE0 82 aa16.25■□□□□ 0.19
VARS-218ENST00000459667 OR5H2Q8NGV7 314 aa16.25■□□□□ 0.19
VARS-218ENST00000459667 GPX8Q8TED1 209 aa16.25■□□□□ 0.19
VARS-218ENST00000459667 ABHD5Q8WTS1 349 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms