RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 PPP5D1E7EU14 171 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 H7BYZ3 331 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 SYNGR1O43759 233 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 SLC25A17O43808 307 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 SOX15O60248 233 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 VENTXO95231 258 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 CEACAM8P31997 349 aaPredicted RBP7.18□□□□□ -1.26
VPS50-208ENST00000458707 ARR3P36575 388 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 PSMB3P49720 205 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 PTTG1IPP53801 180 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 SLC38A11Q08AI6 406 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 ODF1Q14990 250 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 P2RY6Q15077 328 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 TESK1Q15569 626 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 MOB1BQ7L9L4 216 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 MRPL21Q7Z2W9 205 aaKnown RBP7.18□□□□□ -1.26
VPS50-208ENST00000458707 OR2M7Q8NG81 312 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 OR2Y1Q8NGV0 311 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 OR5P3Q8WZ94 311 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 OR5B12Q96R08 314 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 RNF2Q99496 336 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 PARLQ9H300 379 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 UBE2ZQ9H832 354 aaPredicted RBP7.18□□□□□ -1.26
VPS50-208ENST00000458707 MANBALQ9NQG1 85 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 SLC39A9Q9NUM3 307 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 LIN7CQ9NUP9 197 aaKnown RBP7.18□□□□□ -1.26
VPS50-208ENST00000458707 DLL3Q9NYJ7 618 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 LAMP3Q9UQV4 416 aa7.18□□□□□ -1.26
VPS50-208ENST00000458707 MRPS17Q9Y2R5 130 aaKnown RBP7.18□□□□□ -1.26
VPS50-208ENST00000458707 COL27A1Q8IZC6 1860 aaPredicted RBP7.18□□□□□ -1.26
VPS50-208ENST00000458707 ATRXP46100 2492 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 OR5B21A6NL26 309 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 C22orf46C9J442 243 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 P04436 131 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 RFPL3SP0C7P2 107 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 SRP14P37108 136 aaKnown RBP7.17□□□□□ -1.26
VPS50-208ENST00000458707 ACOT6Q3I5F7 207 aaPredicted RBP7.17□□□□□ -1.26
VPS50-208ENST00000458707 ACSM6Q6P461 480 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 SLC23A3Q6PIS1 610 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 BTNL3Q6UXE8 466 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 ZNF66Q6ZN08 573 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.17□□□□□ -1.26
VPS50-208ENST00000458707 FAM58AQ8N1B3 248 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 CISD2Q8N5K1 135 aaKnown RBP7.17□□□□□ -1.26
VPS50-208ENST00000458707 ABHD3Q8WU67 409 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 PKIBQ9C010 78 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 OR51I2Q9H344 312 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 ZNF552Q9H707 407 aaPredicted RBP7.17□□□□□ -1.26
VPS50-208ENST00000458707 LPAR2Q9HBW0 351 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 PLSCR4Q9NRQ2 329 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 OR6C3Q9NZP0 311 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 OR1A1Q9P1Q5 309 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 UBE2L5PA0A1B0GUS4 154 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 HS3ST1O14792 307 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 IL6RP08887 468 aaPredicted RBP7.17□□□□□ -1.26
VPS50-208ENST00000458707 CCKARP32238 428 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 ELLP55199 621 aaPredicted RBP7.17□□□□□ -1.26
VPS50-208ENST00000458707 GFRA1P56159 465 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 ERVS71-1P61550 626 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 ARF1P84077 181 aaKnown RBP7.17□□□□□ -1.26
VPS50-208ENST00000458707 SPANXN5Q5MJ07 72 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 Q6P435 159 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 SPEM1Q8N4L4 309 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 OR2T10Q8NGZ9 312 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 SAP25Q8TEE9 199 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 RDH5Q92781 318 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 TMEM18Q96B42 140 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 ZNF48Q96MX3 618 aaPredicted RBP7.17□□□□□ -1.26
VPS50-208ENST00000458707 HSPB7Q9UBY9 170 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 SMPXQ9UHP9 88 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 MPC1Q9Y5U8 109 aa7.17□□□□□ -1.26
VPS50-208ENST00000458707 CFAP54Q96N23 3096 aa7.16□□□□□ -1.26
VPS50-208ENST00000458707 C5orf49A4QMS7 147 aa7.16□□□□□ -1.26
VPS50-208ENST00000458707 PMS2P5A8MQ11 134 aa7.16□□□□□ -1.26
VPS50-208ENST00000458707 P0C879 139 aa7.16□□□□□ -1.26
VPS50-208ENST00000458707 GNG3P63215 75 aa7.16□□□□□ -1.26
VPS50-208ENST00000458707 LCN2P80188 198 aa7.16□□□□□ -1.26
VPS50-208ENST00000458707 WIPI1Q5MNZ9 446 aaPredicted RBP7.16□□□□□ -1.26
VPS50-208ENST00000458707 NECAP1Q8NC96 275 aa7.16□□□□□ -1.26
VPS50-208ENST00000458707 ORAOV1Q8WV07 137 aa7.16□□□□□ -1.26
VPS50-208ENST00000458707 RPUSD4Q96CM3 377 aaKnown RBP7.16□□□□□ -1.26
VPS50-208ENST00000458707 SMIM12Q96EX1 92 aa7.16□□□□□ -1.26
VPS50-208ENST00000458707 DOCK7Q96N67 2140 aa7.16□□□□□ -1.26
VPS50-208ENST00000458707 ELOVL1Q9BW60 279 aa7.16□□□□□ -1.26
VPS50-208ENST00000458707 PHF7Q9BWX1 381 aaPredicted RBP7.16□□□□□ -1.26
VPS50-208ENST00000458707 PRRG4Q9BZD6 226 aa7.16□□□□□ -1.26
VPS50-208ENST00000458707 ZNF430Q9H8G1 570 aaPredicted RBP7.16□□□□□ -1.26
VPS50-208ENST00000458707 DNAJC4Q9NNZ3 241 aa7.16□□□□□ -1.26
VPS50-208ENST00000458707 ZNF503-AS2A6NEH8 195 aa7.15□□□□□ -1.26
VPS50-208ENST00000458707 RNF212BA8MTL3 300 aa7.15□□□□□ -1.26
VPS50-208ENST00000458707 MLNRO43193 412 aa7.15□□□□□ -1.26
VPS50-208ENST00000458707 MRPL33O75394 65 aaKnown RBP7.15□□□□□ -1.26
VPS50-208ENST00000458707 GYPAP02724 150 aa7.15□□□□□ -1.26
VPS50-208ENST00000458707 CD99P14209 185 aa7.15□□□□□ -1.26
VPS50-208ENST00000458707 SELENOVP59797 346 aa7.15□□□□□ -1.26
VPS50-208ENST00000458707 IQCJQ1A5X6 159 aa7.15□□□□□ -1.26
VPS50-208ENST00000458707 VWC2Q2TAL6 325 aa7.15□□□□□ -1.26
VPS50-208ENST00000458707 TMEM249Q2WGJ8 235 aa7.15□□□□□ -1.26
VPS50-208ENST00000458707 ZNF497Q6ZNH5 498 aa7.15□□□□□ -1.26
VPS50-208ENST00000458707 OR1K1Q8NGR3 316 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms