RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 GINS3Q9BRX5 216 aa13.47□□□□□ -0.25
CAPN13-203ENST00000458085 LINC00574Q9H8X3 128 aa13.47□□□□□ -0.25
CAPN13-203ENST00000458085 TAS2R3Q9NYW6 316 aa13.47□□□□□ -0.25
CAPN13-203ENST00000458085 FCGR3BO75015 233 aa13.47□□□□□ -0.25
CAPN13-203ENST00000458085 CCL3L1P16619 93 aa13.47□□□□□ -0.25
CAPN13-203ENST00000458085 GNG10P50151 68 aa13.47□□□□□ -0.25
CAPN13-203ENST00000458085 RPL31P62899 125 aaKnown RBP13.47□□□□□ -0.25
CAPN13-203ENST00000458085 TMEM267Q0VDI3 215 aaPredicted RBP13.47□□□□□ -0.25
CAPN13-203ENST00000458085 EIF4E3Q8N5X7 224 aaKnown RBP13.47□□□□□ -0.25
CAPN13-203ENST00000458085 TMEM204Q9BSN7 226 aa13.47□□□□□ -0.25
CAPN13-203ENST00000458085 SLC25A31Q9H0C2 315 aa13.47□□□□□ -0.25
CAPN13-203ENST00000458085 SAA2-SAA4A0A096LPE2 208 aa13.46□□□□□ -0.25
CAPN13-203ENST00000458085 BORCS7-ASMTA0A0B4J1R7 106 aa13.46□□□□□ -0.25
CAPN13-203ENST00000458085 TXNL1O43396 289 aa13.46□□□□□ -0.25
CAPN13-203ENST00000458085 SAA2P0DJI9 122 aaPredicted RBP13.46□□□□□ -0.25
CAPN13-203ENST00000458085 COL8A2P25067 703 aa13.46□□□□□ -0.25
CAPN13-203ENST00000458085 SULT1A2P50226 295 aa13.46□□□□□ -0.25
CAPN13-203ENST00000458085 RAB40CQ96S21 281 aa13.46□□□□□ -0.25
CAPN13-203ENST00000458085 LINC00312Q9Y6C7 94 aa13.46□□□□□ -0.25
CAPN13-203ENST00000458085 hADV38S2A0JD32 116 aa13.46□□□□□ -0.26
CAPN13-203ENST00000458085 TOR1AO14656 332 aa13.46□□□□□ -0.26
CAPN13-203ENST00000458085 MED6O75586 246 aa13.46□□□□□ -0.26
CAPN13-203ENST00000458085 TCTEX1D1Q8N7M0 179 aa13.46□□□□□ -0.26
CAPN13-203ENST00000458085 LRRC20Q8TCA0 184 aa13.46□□□□□ -0.26
CAPN13-203ENST00000458085 LRRC46Q96FV0 321 aa13.46□□□□□ -0.26
CAPN13-203ENST00000458085 SMIM8Q96KF7 97 aa13.46□□□□□ -0.26
CAPN13-203ENST00000458085 ZNF251Q9BRH9 671 aa13.46□□□□□ -0.26
CAPN13-203ENST00000458085 COA4Q9NYJ1 87 aa13.46□□□□□ -0.26
CAPN13-203ENST00000458085 ACACBO00763 2458 aa13.45□□□□□ -0.26
CAPN13-203ENST00000458085 SPP1P10451 314 aa13.45□□□□□ -0.26
CAPN13-203ENST00000458085 PXDC1Q5TGL8 231 aa13.45□□□□□ -0.26
CAPN13-203ENST00000458085 TMEM200BQ69YZ2 307 aa13.45□□□□□ -0.26
CAPN13-203ENST00000458085 EIF5AL1Q6IS14 154 aaKnown RBP13.45□□□□□ -0.26
CAPN13-203ENST00000458085 STPG2Q8N412 459 aa13.45□□□□□ -0.26
CAPN13-203ENST00000458085 FAM212BQ9NTI7 297 aaPredicted RBP13.45□□□□□ -0.26
CAPN13-203ENST00000458085 RPUSD1Q9UJJ7 312 aaKnown RBP13.45□□□□□ -0.26
CAPN13-203ENST00000458085 WSB1Q9Y6I7 421 aa13.45□□□□□ -0.26
CAPN13-203ENST00000458085 MARCH11A6NNE9 402 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 DVL1O14640 695 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 ITGB1BP1O14713 200 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 ZG16O60844 167 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 SCO1O75880 301 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 C1QL1O75973 258 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 UBE2KP61086 200 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 RPL23AP62750 156 aaKnown RBP13.44□□□□□ -0.26
CAPN13-203ENST00000458085 TNFRSF9Q07011 255 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 ARL16Q0P5N6 197 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 LYG1Q8N1E2 194 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 H1FXQ92522 213 aaKnown RBP13.44□□□□□ -0.26
CAPN13-203ENST00000458085 MARC2Q969Z3 335 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 RBKSQ9H477 322 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 RAB9BQ9NP90 201 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 PSENENQ9NZ42 101 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 ZP3P21754 424 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 GNLYP22749 145 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 FHITP49789 147 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 RAB7AP51149 207 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 TUSC1Q2TAM9 212 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 SSX9Q7RTT3 188 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 H2BFWTQ7Z2G1 175 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 VKORC1L1Q8N0U8 176 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 FAM216AQ8WUB2 273 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 DDB2Q92466 427 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 R3HDM4Q96D70 268 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 HRH4Q9H3N8 390 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 HSPB7Q9UBY9 170 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 RALYQ9UKM9 306 aaKnown RBP13.44□□□□□ -0.26
CAPN13-203ENST00000458085 SESN1Q9Y6P5 492 aa13.44□□□□□ -0.26
CAPN13-203ENST00000458085 RAB29O14966 203 aa13.43□□□□□ -0.26
CAPN13-203ENST00000458085 NDUFB3O43676 98 aa13.43□□□□□ -0.26
CAPN13-203ENST00000458085 LY6HO94772 140 aa13.43□□□□□ -0.26
CAPN13-203ENST00000458085 OR9G9P0C7N8 305 aa13.43□□□□□ -0.26
CAPN13-203ENST00000458085 SEC11BP0C7V7 166 aa13.43□□□□□ -0.26
CAPN13-203ENST00000458085 METTL15P1P0C7V9 234 aa13.43□□□□□ -0.26
CAPN13-203ENST00000458085 SRSF3P84103 164 aaKnown RBP13.43□□□□□ -0.26
CAPN13-203ENST00000458085 AKR1C1Q04828 323 aa13.43□□□□□ -0.26
CAPN13-203ENST00000458085 BAXQ07812 192 aa13.43□□□□□ -0.26
CAPN13-203ENST00000458085 HFEQ30201 348 aa13.43□□□□□ -0.26
CAPN13-203ENST00000458085 SPINK9Q5DT21 86 aa13.43□□□□□ -0.26
CAPN13-203ENST00000458085 HAPLN4Q86UW8 402 aa13.43□□□□□ -0.26
CAPN13-203ENST00000458085 SULT1A1P50225 295 aa13.43□□□□□ -0.26
CAPN13-203ENST00000458085 MRPS11P82912 194 aaKnown RBP13.43□□□□□ -0.26
CAPN13-203ENST00000458085 MEF2CQ06413 473 aaPredicted RBP13.43□□□□□ -0.26
CAPN13-203ENST00000458085 CCDC28AQ8IWP9 274 aa13.43□□□□□ -0.26
CAPN13-203ENST00000458085 ZDHHC16Q969W1 377 aa13.43□□□□□ -0.26
CAPN13-203ENST00000458085 SAT2Q96F10 170 aaPredicted RBP13.43□□□□□ -0.26
CAPN13-203ENST00000458085 SHOXO15266 292 aa13.42□□□□□ -0.26
CAPN13-203ENST00000458085 ATP6V0CP27449 155 aa13.42□□□□□ -0.26
CAPN13-203ENST00000458085 LRRC10Q5BKY1 277 aa13.42□□□□□ -0.26
CAPN13-203ENST00000458085 SPANXN5Q5MJ07 72 aa13.42□□□□□ -0.26
CAPN13-203ENST00000458085 Q6ZRG5 221 aa13.42□□□□□ -0.26
CAPN13-203ENST00000458085 SLC25A48Q6ZT89 311 aaKnown RBP13.42□□□□□ -0.26
CAPN13-203ENST00000458085 BPIFCQ8NFQ6 507 aa13.42□□□□□ -0.26
CAPN13-203ENST00000458085 CD300LFQ8TDQ1 290 aa13.42□□□□□ -0.26
CAPN13-203ENST00000458085 ZNF714Q96N38 554 aa13.42□□□□□ -0.26
CAPN13-203ENST00000458085 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.42□□□□□ -0.26
CAPN13-203ENST00000458085 KAAG1Q9UBP8 84 aa13.42□□□□□ -0.26
CAPN13-203ENST00000458085 GAB2Q9UQC2 676 aa13.42□□□□□ -0.26
CAPN13-203ENST00000458085 CFAP46Q8IYW2 2715 aa13.42□□□□□ -0.26
CAPN13-203ENST00000458085 MALRD1Q5VYJ5 2156 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms