RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 GUCA1AP43080 201 aaPredicted RBP4.44□□□□□ -1.7
VPS41-209ENST00000457055 ZNF84P51523 738 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 AQP4P55087 323 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 OR1D5P58170 312 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 SNRPD2P62316 118 aaKnown RBP4.44□□□□□ -1.7
VPS41-209ENST00000457055 GRB2P62993 217 aaKnown RBP4.44□□□□□ -1.7
VPS41-209ENST00000457055 TAF10Q12962 218 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 PSG7Q13046 419 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 FHL1Q13642 323 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 PMAIP1Q13794 54 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 TRIP6Q15654 476 aaKnown RBP4.44□□□□□ -1.7
VPS41-209ENST00000457055 BATFQ16520 125 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 CEACAM16Q2WEN9 425 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 LRRC37A5PQ49AS3 106 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 TMEM52BQ4KMG9 183 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 PHLDA2Q53GA4 152 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 GLYATL3Q5SZD4 288 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 FRG2Q64ET8 278 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 OR2T5Q6IEZ7 315 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 ZNF773Q6PK81 442 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 RASL11AQ6T310 242 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 PARM1Q6UWI2 310 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 ALKAL1Q6UXT8 129 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 GDPGP1Q6ZNW5 385 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 OR51A4Q8NGJ6 313 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 OR51T1Q8NGJ9 327 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 OR2T29Q8NH02 315 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 DLX4Q92988 240 aaPredicted RBP4.44□□□□□ -1.7
VPS41-209ENST00000457055 MRPL24Q96A35 216 aaKnown RBP4.44□□□□□ -1.7
VPS41-209ENST00000457055 ZNF419Q96HQ0 510 aaPredicted RBP4.44□□□□□ -1.7
VPS41-209ENST00000457055 SEC22AQ96IW7 307 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 BMFQ96LC9 184 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 DERL3Q96Q80 235 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 PRR25Q96S07 402 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 LYSMD1Q96S90 227 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 HSD17B10Q99714 261 aaKnown RBP4.44□□□□□ -1.7
VPS41-209ENST00000457055 PRADC1Q9BSG0 188 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 HEXA-AS1Q9H8Q6 139 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 PRTFDC1Q9NRG1 225 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 BET1LQ9NYM9 111 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 MYH1P12882 1939 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 DOCK2Q92608 1830 aa4.44□□□□□ -1.7
VPS41-209ENST00000457055 RALGAPA2Q2PPJ7 1873 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 LOC285556D6RIA3 1793 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 MYH2Q9UKX2 1941 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 NAV2Q8IVL1 2488 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 FAM236DA0A1B0GTK5 79 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 SPAARA0A1B0GVQ0 90 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 BTNL10A8MVZ5 291 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 M0R233 179 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 MYL12BO14950 172 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 MRPS12O15235 138 aaKnown RBP4.43□□□□□ -1.7
VPS41-209ENST00000457055 GPR137BO60478 399 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 NDUFB8O95169 186 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 CLDN14O95500 239 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 FAM236CP0DP71 79 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 HIST1H1DP16402 221 aaKnown RBP4.43□□□□□ -1.7
VPS41-209ENST00000457055 ZNF708P17019 499 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 GABRG2P18507 467 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 KLK2P20151 261 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 COX5AP20674 150 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 CSRP1P21291 193 aaKnown RBP4.43□□□□□ -1.7
VPS41-209ENST00000457055 CXCL12P48061 93 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 RPS13P62277 151 aaKnown RBP4.43□□□□□ -1.7
VPS41-209ENST00000457055 SRPXP78539 464 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 LAGE3Q14657 143 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 ALG10BQ5I7T1 473 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 C10orf91Q5T1B1 145 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 SPATA31B1PQ5VZV4 182 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 PLPP4Q5VZY2 271 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 PRSS48Q7RTY5 328 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 NEGR1Q7Z3B1 354 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 ZNF440Q8IYI8 595 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 PAQR4Q8N4S7 273 aaPredicted RBP4.43□□□□□ -1.7
VPS41-209ENST00000457055 KLHDC1Q8N7A1 406 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 ZNF433Q8N7K0 673 aaPredicted RBP4.43□□□□□ -1.7
VPS41-209ENST00000457055 OR11G2Q8NGC1 345 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 OR5AR1Q8NGP9 310 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 PPTC7Q8NI37 304 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 TMEM18Q96B42 140 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 MRPL45Q9BRJ2 306 aaKnown RBP4.43□□□□□ -1.7
VPS41-209ENST00000457055 GATA5Q9BWX5 397 aaPredicted RBP4.43□□□□□ -1.7
VPS41-209ENST00000457055 RERGLQ9H628 205 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 ACKR4Q9NPB9 350 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 NRN1Q9NPD7 142 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 RBM22Q9NW64 420 aaKnown RBP eCLIP4.43□□□□□ -1.7
VPS41-209ENST00000457055 KCNIP1Q9NZI2 227 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 PLEKHB1Q9UF11 243 aaPredicted RBP4.43□□□□□ -1.7
VPS41-209ENST00000457055 MCM3APO60318 1980 aa4.43□□□□□ -1.7
VPS41-209ENST00000457055 FLNBO75369 2602 aaKnown RBP4.42□□□□□ -1.7
VPS41-209ENST00000457055 MYH9P35579 1960 aaKnown RBP4.42□□□□□ -1.7
VPS41-209ENST00000457055 TRAV5A0A0B4J249 113 aa4.42□□□□□ -1.7
VPS41-209ENST00000457055 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.42□□□□□ -1.7
VPS41-209ENST00000457055 A0A1B0GW64 132 aa4.42□□□□□ -1.7
VPS41-209ENST00000457055 A0A1W2PRS3 328 aa4.42□□□□□ -1.7
VPS41-209ENST00000457055 MSGN1A6NI15 193 aa4.42□□□□□ -1.7
VPS41-209ENST00000457055 C2CD4DB7Z1M9 353 aa4.42□□□□□ -1.7
VPS41-209ENST00000457055 G3V3Q6 166 aa4.42□□□□□ -1.7
VPS41-209ENST00000457055 SMKR1H3BMG3 65 aa4.42□□□□□ -1.7
VPS41-209ENST00000457055 ZFAND5O76080 213 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms