RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 SLC22A5O76082 557 aa13.62□□□□□ -0.23
USP39-208ENST00000455732 OR5H8P0DN80 308 aa13.62□□□□□ -0.23
USP39-208ENST00000455732 NFYAP23511 347 aaPredicted RBP13.62□□□□□ -0.23
USP39-208ENST00000455732 THBS3P49746 956 aa13.62□□□□□ -0.23
USP39-208ENST00000455732 LUMP51884 338 aaPredicted RBP13.62□□□□□ -0.23
USP39-208ENST00000455732 TAS2R20P59543 309 aa13.62□□□□□ -0.23
USP39-208ENST00000455732 LIN54Q6MZP7 749 aa13.62□□□□□ -0.23
USP39-208ENST00000455732 TEX38Q6PEX7 206 aa13.62□□□□□ -0.23
USP39-208ENST00000455732 ZNF645Q8N7E2 425 aa13.62□□□□□ -0.23
USP39-208ENST00000455732 RNF152Q8N8N0 203 aa13.62□□□□□ -0.23
USP39-208ENST00000455732 SNAPC3Q92966 411 aa13.62□□□□□ -0.23
USP39-208ENST00000455732 ADTRPQ96IZ2 230 aa13.62□□□□□ -0.23
USP39-208ENST00000455732 TSNAXQ99598 290 aaKnown RBP13.62□□□□□ -0.23
USP39-208ENST00000455732 OR51J1Q9H342 316 aa13.62□□□□□ -0.23
USP39-208ENST00000455732 SLC35D1Q9NTN3 355 aa13.62□□□□□ -0.23
USP39-208ENST00000455732 ZFP57Q9NU63 452 aa13.62□□□□□ -0.23
USP39-208ENST00000455732 COMMD3Q9UBI1 195 aa13.62□□□□□ -0.23
USP39-208ENST00000455732 ANAPC10Q9UM13 185 aa13.62□□□□□ -0.23
USP39-208ENST00000455732 A0A1W2PRX2 142 aa13.61□□□□□ -0.23
USP39-208ENST00000455732 EIF4EP06730 217 aaKnown RBP13.61□□□□□ -0.23
USP39-208ENST00000455732 PTHLHP12272 177 aa13.61□□□□□ -0.23
USP39-208ENST00000455732 VDAC1P21796 283 aa13.61□□□□□ -0.23
USP39-208ENST00000455732 ARPC4P59998 168 aa13.61□□□□□ -0.23
USP39-208ENST00000455732 RPL23AP62750 156 aaKnown RBP13.61□□□□□ -0.23
USP39-208ENST00000455732 FOXE3Q13461 319 aa13.61□□□□□ -0.23
USP39-208ENST00000455732 PSG5Q15238 335 aa13.61□□□□□ -0.23
USP39-208ENST00000455732 BEAN1Q3B7T3 259 aa13.61□□□□□ -0.23
USP39-208ENST00000455732 KPRPQ5T749 579 aaPredicted RBP13.61□□□□□ -0.23
USP39-208ENST00000455732 DDB2Q92466 427 aa13.61□□□□□ -0.23
USP39-208ENST00000455732 AP3S1Q92572 193 aa13.61□□□□□ -0.23
USP39-208ENST00000455732 FLYWCH2Q96CP2 140 aaKnown RBP13.61□□□□□ -0.23
USP39-208ENST00000455732 FBXL15Q9H469 300 aa13.61□□□□□ -0.23
USP39-208ENST00000455732 IGHG4P01861 327 aa13.6□□□□□ -0.23
USP39-208ENST00000455732 ELANEP08246 267 aa13.6□□□□□ -0.23
USP39-208ENST00000455732 RRASP10301 218 aa13.6□□□□□ -0.23
USP39-208ENST00000455732 SLC6A1P30531 599 aa13.6□□□□□ -0.23
USP39-208ENST00000455732 DUTP33316 252 aaKnown RBP13.6□□□□□ -0.23
USP39-208ENST00000455732 CRIP2P52943 208 aaPredicted RBP13.6□□□□□ -0.23
USP39-208ENST00000455732 RTL8BQ17RB0 113 aa13.6□□□□□ -0.23
USP39-208ENST00000455732 KHDC1LQ5JSQ8 128 aa13.6□□□□□ -0.23
USP39-208ENST00000455732 ZNF660Q6AZW8 331 aaPredicted RBP13.6□□□□□ -0.23
USP39-208ENST00000455732 BCL7BQ9BQE9 202 aa13.6□□□□□ -0.23
USP39-208ENST00000455732 NECAP2Q9NVZ3 263 aa13.6□□□□□ -0.23
USP39-208ENST00000455732 IGKV1D-13A0A0B4J2D9 117 aa13.59□□□□□ -0.23
USP39-208ENST00000455732 ATP6V0E1O15342 81 aa13.59□□□□□ -0.23
USP39-208ENST00000455732 IGLV2-14P01704 120 aa13.59□□□□□ -0.23
USP39-208ENST00000455732 IGKV1-13P0DP09 117 aa13.59□□□□□ -0.23
USP39-208ENST00000455732 PF4V1P10720 104 aa13.59□□□□□ -0.23
USP39-208ENST00000455732 ZNF182P17025 639 aaPredicted RBP13.59□□□□□ -0.23
USP39-208ENST00000455732 PPIFP30405 207 aaKnown RBP13.59□□□□□ -0.23
USP39-208ENST00000455732 LGALS7P47929 136 aa13.59□□□□□ -0.23
USP39-208ENST00000455732 RPS16P62249 146 aaKnown RBP13.59□□□□□ -0.23
USP39-208ENST00000455732 NDPQ00604 133 aa13.59□□□□□ -0.23
USP39-208ENST00000455732 CBX3Q13185 183 aa13.59□□□□□ -0.23
USP39-208ENST00000455732 PLGLAQ15195 96 aa13.59□□□□□ -0.23
USP39-208ENST00000455732 MSMO1Q15800 293 aa13.59□□□□□ -0.23
USP39-208ENST00000455732 TMEM177Q53S58 311 aa13.59□□□□□ -0.23
USP39-208ENST00000455732 MZT2AQ6P582 158 aa13.59□□□□□ -0.23
USP39-208ENST00000455732 WFDC9Q8NEX5 89 aa13.59□□□□□ -0.23
USP39-208ENST00000455732 OR5AP2Q8NGF4 316 aa13.59□□□□□ -0.23
USP39-208ENST00000455732 IFT46Q9NQC8 304 aa13.59□□□□□ -0.23
USP39-208ENST00000455732 METTL1Q9UBP6 276 aaKnown RBP13.59□□□□□ -0.23
USP39-208ENST00000455732 RBMX2Q9Y388 322 aaKnown RBP13.59□□□□□ -0.23
USP39-208ENST00000455732 DNAH3Q8TD57 4116 aa13.58□□□□□ -0.23
USP39-208ENST00000455732 LINC00473A8K010 186 aa13.58□□□□□ -0.24
USP39-208ENST00000455732 IGLV2-23P01705 113 aa13.58□□□□□ -0.24
USP39-208ENST00000455732 NAT1P18440 290 aa13.58□□□□□ -0.24
USP39-208ENST00000455732 CX3CL1P78423 397 aa13.58□□□□□ -0.24
USP39-208ENST00000455732 OXLD1Q5BKU9 147 aa13.58□□□□□ -0.24
USP39-208ENST00000455732 CXorf66Q5JRM2 361 aaPredicted RBP13.58□□□□□ -0.24
USP39-208ENST00000455732 OVCH2Q7RTZ1 564 aa13.58□□□□□ -0.24
USP39-208ENST00000455732 RAB2BQ8WUD1 216 aa13.58□□□□□ -0.24
USP39-208ENST00000455732 PARP11Q9NR21 331 aa13.58□□□□□ -0.24
USP39-208ENST00000455732 SMIM31A0A1B0GVY4 71 aa13.57□□□□□ -0.24
USP39-208ENST00000455732 FCN1O00602 326 aa13.57□□□□□ -0.24
USP39-208ENST00000455732 HPGDSO60760 199 aa13.57□□□□□ -0.24
USP39-208ENST00000455732 CRYGBP07316 175 aa13.57□□□□□ -0.24
USP39-208ENST00000455732 ELK1P19419 428 aa13.57□□□□□ -0.24
USP39-208ENST00000455732 PSMB8P28062 276 aa13.57□□□□□ -0.24
USP39-208ENST00000455732 FCGR2CP31995 323 aa13.57□□□□□ -0.24
USP39-208ENST00000455732 PRSS3P35030 304 aa13.57□□□□□ -0.24
USP39-208ENST00000455732 RPL5P46777 297 aaKnown RBP13.57□□□□□ -0.24
USP39-208ENST00000455732 EIF4EBP1Q13541 118 aaPredicted RBP13.57□□□□□ -0.24
USP39-208ENST00000455732 CDK10Q15131 360 aa13.57□□□□□ -0.24
USP39-208ENST00000455732 C19orf54Q5BKX5 351 aa13.57□□□□□ -0.24
USP39-208ENST00000455732 ZNF562Q6V9R5 426 aa13.57□□□□□ -0.24
USP39-208ENST00000455732 MINDY2Q8NBR6 621 aa13.57□□□□□ -0.24
USP39-208ENST00000455732 BVESQ8NE79 360 aa13.57□□□□□ -0.24
USP39-208ENST00000455732 MYOZ3Q8TDC0 251 aa13.57□□□□□ -0.24
USP39-208ENST00000455732 GPX8Q8TED1 209 aa13.57□□□□□ -0.24
USP39-208ENST00000455732 HARBI1Q96MB7 349 aa13.57□□□□□ -0.24
USP39-208ENST00000455732 SCPEP1Q9HB40 452 aa13.57□□□□□ -0.24
USP39-208ENST00000455732 ADAM30Q9UKF2 790 aa13.57□□□□□ -0.24
USP39-208ENST00000455732 TRAV41A0A0B4J266 112 aa13.56□□□□□ -0.24
USP39-208ENST00000455732 MEIS3P1A6NDR6 274 aa13.56□□□□□ -0.24
USP39-208ENST00000455732 G3V318 75 aa13.56□□□□□ -0.24
USP39-208ENST00000455732 J3QRK9 145 aa13.56□□□□□ -0.24
USP39-208ENST00000455732 SLC25A17O43808 307 aa13.56□□□□□ -0.24
USP39-208ENST00000455732 PPYP01298 95 aa13.56□□□□□ -0.24
USP39-208ENST00000455732 IGLV1-40P01703 118 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms