RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 COX6A1P12074 109 aa8.71□□□□□ -1.02
SCN5A-210ENST00000455624 MFAP2P55001 183 aa8.71□□□□□ -1.02
SCN5A-210ENST00000455624 COL5A1-AS1Q5SY13 56 aa8.71□□□□□ -1.02
SCN5A-210ENST00000455624 MIXL1Q9H2W2 232 aa8.71□□□□□ -1.02
SCN5A-210ENST00000455624 SELENOTP62341 195 aa8.71□□□□□ -1.02
SCN5A-210ENST00000455624 HIST1H1AQ02539 215 aaPredicted RBP8.71□□□□□ -1.02
SCN5A-210ENST00000455624 SNAI3Q3KNW1 292 aa8.71□□□□□ -1.02
SCN5A-210ENST00000455624 PQLC2Q6ZP29 291 aa8.71□□□□□ -1.02
SCN5A-210ENST00000455624 AKIRIN1Q9H9L7 192 aaPredicted RBP8.71□□□□□ -1.02
SCN5A-210ENST00000455624 A0A1W2PRX2 142 aa8.71□□□□□ -1.02
SCN5A-210ENST00000455624 NDUFB4O95168 129 aa8.71□□□□□ -1.02
SCN5A-210ENST00000455624 CD160O95971 181 aa8.71□□□□□ -1.02
SCN5A-210ENST00000455624 FAM3BP58499 235 aaPredicted RBP8.71□□□□□ -1.02
SCN5A-210ENST00000455624 TMEM177Q53S58 311 aa8.71□□□□□ -1.02
SCN5A-210ENST00000455624 SLC25A47Q6Q0C1 308 aa8.71□□□□□ -1.02
SCN5A-210ENST00000455624 FAM159AQ6UWV7 190 aa8.71□□□□□ -1.02
SCN5A-210ENST00000455624 CBLN2Q8IUK8 224 aa8.71□□□□□ -1.02
SCN5A-210ENST00000455624 TMEM45BQ96B21 275 aa8.71□□□□□ -1.02
SCN5A-210ENST00000455624 YAE1D1Q9NRH1 226 aa8.71□□□□□ -1.02
SCN5A-210ENST00000455624 TNFSF18Q9UNG2 199 aa8.71□□□□□ -1.02
SCN5A-210ENST00000455624 ADAMTSL1Q8N6G6 1762 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 B9A039 149 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 TRGV3P03979 118 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 TRGC1P0CF51 173 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 MIC13Q5XKP0 118 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 SP7Q8TDD2 431 aaPredicted RBP8.7□□□□□ -1.02
SCN5A-210ENST00000455624 KCNK17Q96T54 332 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 SSBP3Q9BWW4 388 aaPredicted RBP8.7□□□□□ -1.02
SCN5A-210ENST00000455624 A1L4Q6 167 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 C7orf71A4D174 169 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 CFDP00746 253 aaPredicted RBP8.7□□□□□ -1.02
SCN5A-210ENST00000455624 ITLN2Q8WWU7 325 aaPredicted RBP8.7□□□□□ -1.02
SCN5A-210ENST00000455624 NEU1Q99519 415 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 QTRT1Q9BXR0 403 aaKnown RBP8.7□□□□□ -1.02
SCN5A-210ENST00000455624 COL25A1Q9BXS0 654 aaPredicted RBP8.7□□□□□ -1.02
SCN5A-210ENST00000455624 PKIBQ9C010 78 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 JPT1Q9UK76 154 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 AKAP11Q9UKA4 1901 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 GDF9O60383 454 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 PTP4A3O75365 173 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 C1QAP02745 245 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 LCN2P80188 198 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 IGHV3-66A0A0C4DH42 116 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 FABP2P12104 132 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 STARD6P59095 220 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 TMEM136Q6ZRR5 245 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 TMEM186Q96B77 213 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 DUX3Q96PT4 197 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 ZNF729A6NN14 1252 aaPredicted RBP8.7□□□□□ -1.02
SCN5A-210ENST00000455624 CDCP2Q5VXM1 449 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 C9orf62Q8N4C0 152 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 OR9G1Q8NH87 305 aa8.7□□□□□ -1.02
SCN5A-210ENST00000455624 ZNF345Q14585 488 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 AQP10Q96PS8 301 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 FOXJ2Q9P0K8 574 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 MYO16Q9Y6X6 1858 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 DLEC1Q9Y238 1755 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 DXOO77932 396 aaKnown RBP8.69□□□□□ -1.02
SCN5A-210ENST00000455624 ARL14EPLP0DKL9 152 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 FSTP19883 344 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 NUTF2P61970 127 aaKnown RBP8.69□□□□□ -1.02
SCN5A-210ENST00000455624 SRSF12Q8WXF0 261 aaKnown RBP8.69□□□□□ -1.02
SCN5A-210ENST00000455624 EMP1P54849 157 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 SERF2P84101 59 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 RFLNBQ8N5W9 214 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 KLF14Q8TD94 323 aaPredicted RBP8.69□□□□□ -1.02
SCN5A-210ENST00000455624 TMEM222Q9H0R3 208 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 HOXB1P14653 301 aaPredicted RBP8.69□□□□□ -1.02
SCN5A-210ENST00000455624 APOBEC3AP31941 199 aaPredicted RBP8.69□□□□□ -1.02
SCN5A-210ENST00000455624 ZNF146Q15072 292 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 ERASQ7Z444 233 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 MRPL18Q9H0U6 180 aaKnown RBP8.69□□□□□ -1.02
SCN5A-210ENST00000455624 DNAJC4Q9NNZ3 241 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 CXCL3P19876 107 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 SUMO2P61956 95 aaKnown RBP8.69□□□□□ -1.02
SCN5A-210ENST00000455624 RUNX1Q01196 453 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 BEND2Q8NDZ0 799 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 TMEM54Q969K7 222 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 C2orf88Q9BSF0 95 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 KLK15Q9H2R5 256 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 PGPEP1Q9NXJ5 209 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 F11RQ9Y624 299 aaKnown RBP8.69□□□□□ -1.02
SCN5A-210ENST00000455624 TSPAN13O95857 204 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 ACSF3Q4G176 576 aaPredicted RBP8.69□□□□□ -1.02
SCN5A-210ENST00000455624 ABLIM2Q6H8Q1 611 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 SAP25Q8TEE9 199 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 GPR146Q96CH1 333 aa8.69□□□□□ -1.02
SCN5A-210ENST00000455624 ASCC3Q8N3C0 2202 aaKnown RBP8.68□□□□□ -1.02
SCN5A-210ENST00000455624 LOC101059948A0A1B0GTJ6 334 aa8.68□□□□□ -1.02
SCN5A-210ENST00000455624 FAM90A10PA6NDY2 464 aa8.68□□□□□ -1.02
SCN5A-210ENST00000455624 FAM90A18PA6NE21 464 aa8.68□□□□□ -1.02
SCN5A-210ENST00000455624 FAM90A16PA6NEW6 464 aa8.68□□□□□ -1.02
SCN5A-210ENST00000455624 FAM90A20PA6NIJ5 464 aa8.68□□□□□ -1.02
SCN5A-210ENST00000455624 FAM90A8PA6NJQ4 464 aa8.68□□□□□ -1.02
SCN5A-210ENST00000455624 FAM90A7PA6NKC0 464 aa8.68□□□□□ -1.02
SCN5A-210ENST00000455624 ZNF815PA8K554 130 aa8.68□□□□□ -1.02
SCN5A-210ENST00000455624 FOXI3A8MTJ6 420 aaPredicted RBP8.68□□□□□ -1.02
SCN5A-210ENST00000455624 FAM90A22PA8MWA6 464 aa8.68□□□□□ -1.02
SCN5A-210ENST00000455624 FAM90A12PA8MX19 464 aa8.68□□□□□ -1.02
SCN5A-210ENST00000455624 FAM90A5PA8MXJ8 464 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms