RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 EXOSC2Q13868 293 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-210ENST00000454859 CDSNQ15517 529 aa5.63□□□□□ -1.51
ECHDC1-210ENST00000454859 ATP6V1FQ16864 119 aa5.63□□□□□ -1.51
ECHDC1-210ENST00000454859 CT45A1Q5HYN5 189 aa5.63□□□□□ -1.51
ECHDC1-210ENST00000454859 ZNF841Q6ZN19 808 aa5.63□□□□□ -1.51
ECHDC1-210ENST00000454859 FGFRL1Q8N441 504 aa5.63□□□□□ -1.51
ECHDC1-210ENST00000454859 OR2C3Q8N628 320 aa5.63□□□□□ -1.51
ECHDC1-210ENST00000454859 CT45A3Q8NHU0 189 aa5.63□□□□□ -1.51
ECHDC1-210ENST00000454859 GPR146Q96CH1 333 aa5.63□□□□□ -1.51
ECHDC1-210ENST00000454859 ZNF257Q9Y2Q1 563 aa5.63□□□□□ -1.51
ECHDC1-210ENST00000454859 POLR3KQ9Y2Y1 108 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-210ENST00000454859 ZZEF1O43149 2961 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 SYNGR2O43760 224 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 APOA2P02652 100 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 SEC11BP0C7V7 166 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 HBG1P69891 147 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 HBG2P69892 147 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 DPPA3Q6W0C5 159 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 H2BFWTQ7Z2G1 175 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 STX12Q86Y82 276 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 PDPNQ86YL7 162 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 EIF4E3Q8N5X7 224 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 DMBX1Q8NFW5 382 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 VSTM2AQ8TAG5 236 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 GNPNAT1Q96EK6 184 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 CLCC1Q96S66 551 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 HIPK2Q9H2X6 1198 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 ZC4H2Q9NQZ6 224 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 OR5AC2Q9NZP5 309 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 RCL1Q9Y2P8 373 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 TRAV39A0A0B4J263 110 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 MPTX1A8MV57 137 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 KIAA1324LA8MWY0 1029 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 INS-IGF2F8WCM5 200 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 IGKV1-5P01602 117 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 SPCS3P61009 180 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 SNTB1Q13884 538 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 LRRC37A5PQ49AS3 106 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 FAM201AQ5SY85 155 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 WDR25Q64LD2 544 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 MRPL41Q8IXM3 137 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 PDZD9Q8IXQ8 264 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 OR5AN1Q8NGI8 311 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 RFESDQ8TAC1 157 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 RNF141Q8WVD5 230 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 ZNF251Q9BRH9 671 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 GGACTQ9BVM4 153 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 ZNF471Q9BX82 626 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 TMEM133Q9H2Q1 129 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 RNF150Q9ULK6 438 aa5.62□□□□□ -1.51
ECHDC1-210ENST00000454859 USF3Q68DE3 2245 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 ICE1Q9Y2F5 2266 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 UMAD1C9J7I0 102 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 FNDC10F2Z333 226 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 TRIM77I1YAP6 450 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 J3QR06 171 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 M0R1X1 148 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 ZNF205O95201 554 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 IGKV1-39P01597 117 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 IGKV1D-39P04432 117 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 IGHV1-8P0DP01 117 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 COL8A2P25067 703 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 SSTR2P30874 369 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 LGALS7P47929 136 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 UQCRFS1P47985 274 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 SULT1A1P50225 295 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 BLOC1S1P78537 153 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 TNFRSF9Q07011 255 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 TMEM177Q53S58 311 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 ODF3L1Q8IXM7 274 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 ZNF843Q8N446 348 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 COMMD1Q8N668 190 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 OR13D1Q8NGV5 346 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 R3HDM4Q96D70 268 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 GINS3Q9BRX5 216 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 CYTL1Q9NRR1 136 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 C19orf12Q9NSK7 152 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 BET1LQ9NYM9 111 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 CTSZQ9UBR2 303 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 CACNG5Q9UF02 275 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 PRNDQ9UKY0 176 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 STRAPQ9Y3F4 350 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 LSM5Q9Y4Y9 91 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 KPTNQ9Y664 436 aa5.61□□□□□ -1.51
ECHDC1-210ENST00000454859 SAA2-SAA4A0A096LPE2 208 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 PPIAL4CA0A0B4J2A2 164 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 MARCH11A6NNE9 402 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 FGF16O43320 207 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 TNFSF12O43508 249 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 ENSAO43768 121 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 SOD3P08294 240 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 IL6RP08887 468 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 SAA2P0DJI9 122 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 OMGP23515 440 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 CEACAM3P40198 252 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 HTR2BP41595 481 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 GPR6P46095 362 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 PDLIM4P50479 330 aa5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 ZNF816Q0VGE8 651 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-210ENST00000454859 TMEM252Q8N6L7 170 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms