RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 PLA2G7Q13093 441 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 KLF5Q13887 457 aaPredicted RBP4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 GPR176Q14439 515 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 MRGPRG-AS1Q2M3A8 158 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 RPEL1Q2QD12 228 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 AKIRIN2Q53H80 203 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 YIF1BQ5BJH7 314 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 OR2B11Q5JQS5 317 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 RBM48Q5RL73 367 aaKnown RBP4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 RNLSQ5VYX0 342 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 STEAP3Q658P3 488 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 FAM71F2Q6NXP2 309 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 AHSA2Q719I0 299 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 CEACAM19Q7Z692 300 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 LRRTM1Q86UE6 522 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 Q8N402 240 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 KCNG3Q8TAE7 436 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 DYNLRB2Q8TF09 96 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 EDARADDQ8WWZ3 215 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 Q96MT0 163 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 NEURL2Q9BR09 285 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 SLA2Q9H6Q3 261 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 RANGRFQ9HD47 186 aaPredicted RBP4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ZC4H2Q9NQZ6 224 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 SLC35D1Q9NTN3 355 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 BABAM2Q9NXR7 383 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ZNF230Q9UIE0 474 aaPredicted RBP4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 DIMT1Q9UNQ2 313 aaKnown RBP4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ERGIC3Q9Y282 383 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ABCA13Q86UQ4 5058 aa4.52□□□□□ -1.69
HLA-DPA3-207ENST00000454398 A0A0J9YWU9 116 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 FAM90A7PA6NKC0 464 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 SRRM4A7MD48 611 aaKnown RBP4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 H0Y980 276 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 BET1O15155 118 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 MPPED1O15442 326 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 OR2A4O95047 310 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 SCAF4O95104 1147 aaKnown RBP4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 SPDEFO95238 335 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 APOA2P02652 100 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 DCKP27707 260 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 CD40LGP29965 261 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 CEACAM6P40199 344 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 RANBP1P43487 201 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 CLDN12P56749 244 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 RHOGP84095 191 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 TNXAQ16473 311 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 IGSF11Q5DX21 431 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 LAIR2Q6ISS4 152 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ZNF562Q6V9R5 426 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 MOB1BQ7L9L4 216 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 TMEM61Q8N0U2 210 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 PQLC1Q8N2U9 271 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 NKAIN3Q8N8D7 197 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ADAD2Q8NCV1 583 aaKnown RBP4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ACOT12Q8WYK0 555 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ARHGAP5-AS1Q96IT6 56 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 TSNAXQ99598 290 aaKnown RBP4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 PHB2Q99623 299 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 GFI1Q99684 422 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 C9orf16Q9BUW7 83 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 AKIP1Q9NQ31 210 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 C12orf4Q9NQ89 552 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 MRPS18AQ9NVS2 196 aaKnown RBP4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 SMPD3Q9NY59 655 aaPredicted RBP4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 RDH8Q9NYR8 311 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 PIPOXQ9P0Z9 390 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 PEF1Q9UBV8 284 aaKnown RBP4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 NKX1-2Q9UD57 310 aaPredicted RBP4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 EXOSC1Q9Y3B2 195 aaKnown RBP4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 HSPG2P98160 4391 aa4.51□□□□□ -1.69
HLA-DPA3-207ENST00000454398 A0A075B6Q4 140 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 A0A0B4J203 849 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 DPPA5A6NC42 116 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 A6NHS1 94 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 MSGN1A6NI15 193 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 C2orf70A6NJV1 201 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 OR11H12B2RN74 326 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 J3QRK9 145 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 MYL12BO14950 172 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 SHOXO15266 292 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 GPX5O75715 221 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 RBBP9O75884 186 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 OR2J3O76001 311 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 CRYZL1O95825 349 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 GLAP06280 429 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 CRYGBP07316 175 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 MYOD1P15172 320 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 LGALS7P47929 136 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 RASSF2P50749 326 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 QRFPP83859 136 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ST3GAL4Q11206 333 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 DEFB135Q30KP9 77 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ZNF343Q6P1L6 599 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ZNF880Q6PDB4 577 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 BTNL8Q6UX41 500 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 LINC00322Q6ZN03 302 aaPredicted RBP4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ZNF554Q86TJ5 538 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 PDPNQ86YL7 162 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 VKORC1L1Q8N0U8 176 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms