RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 THBS3P49746 956 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 TSPAN5P62079 268 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 CBX3Q13185 183 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 LSAMPQ13449 338 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 CNPY1Q3B7I2 92 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 LPCAT3Q6P1A2 487 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 C11orf88Q6PI97 169 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 C5orf24Q7Z6I8 188 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 DRAM1Q8N682 238 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 GDPD1Q8N9F7 314 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 OR6F1Q8NGZ6 308 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 OR8U1Q8NH10 309 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 OR56B4Q8NH76 319 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 PIFOQ8TCI5 191 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 HSD17B10Q99714 261 aaKnown RBP6.99□□□□□ -1.29
COL28A1-205ENST00000453441 RNF5Q99942 180 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 NABP2Q9BQ15 211 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 KRTAP4-12Q9BQ66 201 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 ZNF251Q9BRH9 671 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 NPFFR1Q9GZQ6 430 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 OR2D2Q9H210 308 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 C1RLQ9NZP8 487 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 KLK11Q9UBX7 282 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 V9GYH0 126 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 FGF16O43320 207 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 MOSP00540 346 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 PMP2P02689 132 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 TMEM11P17152 192 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 AADACP22760 399 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 NFYAP23511 347 aaPredicted RBP6.98□□□□□ -1.29
COL28A1-205ENST00000453441 HLA-DMAP28067 261 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 FAUP35544 74 aaKnown RBP6.98□□□□□ -1.29
COL28A1-205ENST00000453441 DGCR2P98153 550 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 PYDC2Q56P42 97 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 ZNF660Q6AZW8 331 aaPredicted RBP6.98□□□□□ -1.29
COL28A1-205ENST00000453441 FAM53AQ6NSI3 398 aaPredicted RBP6.98□□□□□ -1.29
COL28A1-205ENST00000453441 STEAP1BQ6NZ63 245 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 ZNF66Q6ZN08 573 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 PDPNQ86YL7 162 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 LYSMD2Q8IV50 215 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 Q8N402 240 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 OR5AN1Q8NGI8 311 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 OR4C13Q8NGP0 309 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 OR4F5Q8NH21 305 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 S100ZQ8WXG8 99 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 MOB3AQ96BX8 217 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 ABHD14BQ96IU4 210 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 RBM14Q96PK6 669 aaKnown RBP6.98□□□□□ -1.29
COL28A1-205ENST00000453441 THAP7Q9BT49 309 aaPredicted RBP6.98□□□□□ -1.29
COL28A1-205ENST00000453441 PARP12Q9H0J9 701 aaKnown RBP6.98□□□□□ -1.29
COL28A1-205ENST00000453441 SDHAF2Q9NX18 166 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 MOB4Q9Y3A3 225 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 WASHC3Q9Y3C0 194 aa6.98□□□□□ -1.29
COL28A1-205ENST00000453441 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.98□□□□□ -1.29
COL28A1-205ENST00000453441 ANKRD20A5PA0PJZ0 165 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 TMEM89A2RUT3 159 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 RNF212BA8MTL3 300 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 DISC1C4P0D8 188 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 M0R1X1 148 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 RAB3DO95716 219 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 IGKV1D-33P01593 117 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 IGKV1-33P01594 117 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 FCER2P06734 321 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 SNRNP70P08621 437 aaKnown RBP6.97□□□□□ -1.29
COL28A1-205ENST00000453441 AKAIN1P0CW23 69 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 CT45A6P0DMU7 189 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 CT45A5P0DMU8 189 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 CT45A7P0DMV0 189 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 HKR1P10072 659 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 KIR2DS2P43631 304 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 REG1BP48304 166 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 UCP3P55916 312 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 FOXL1Q12952 345 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 CATR1Q13166 79 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 DIAPH2-AS1Q14236 149 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 HES1Q14469 280 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 LY6EQ16553 131 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 RTL8BQ17RB0 113 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 RPL39P5Q59GN2 51 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 CMTM1Q8IZ96 169 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 ZNF486Q96H40 463 aaPredicted RBP6.97□□□□□ -1.29
COL28A1-205ENST00000453441 PRRT1Q99946 306 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 ZNF2Q9BSG1 426 aaPredicted RBP6.97□□□□□ -1.29
COL28A1-205ENST00000453441 SLC25A33Q9BSK2 321 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 MRPL20Q9BYC9 149 aaKnown RBP6.97□□□□□ -1.29
COL28A1-205ENST00000453441 C19orf73Q9NVV2 129 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 RNF150Q9ULK6 438 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 PRELID3BQ9Y3B1 194 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 MMP24Q9Y5R2 645 aa6.97□□□□□ -1.29
COL28A1-205ENST00000453441 COL6A5A8TX70 2615 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 IGKV1D-13A0A0B4J2D9 117 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 H0YJW9 148 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 TSPAN9O75954 239 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 SPDEFO95238 335 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 CD3DP04234 171 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 IGKV1-13P0DP09 117 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 DUTP33316 252 aaKnown RBP6.96□□□□□ -1.3
COL28A1-205ENST00000453441 RFX2P48378 723 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 INPP1P49441 399 aa6.96□□□□□ -1.3
COL28A1-205ENST00000453441 COMPP49747 757 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms