RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 LY6LH3BQJ8 138 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 ENSAO43768 121 aaKnown RBP4.88□□□□□ -1.63
SDC4P-201ENST00000453285 RAMP3O60896 148 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 PITX3O75364 302 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 FOXH1O75593 365 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 IFNA21P01568 189 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 IGKV1-5P01602 117 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 P0C879 139 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 CT45A6P0DMU7 189 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 CT45A5P0DMU8 189 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 CT45A7P0DMV0 189 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 LYL1P12980 280 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 MMP9P14780 707 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 ZNF16P17020 682 aaPredicted RBP4.88□□□□□ -1.63
SDC4P-201ENST00000453285 VDAC1P21796 283 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 PRTN3P24158 256 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 DSCR9P59020 149 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 LCN2P80188 198 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 CYCSP99999 105 aaKnown RBP4.88□□□□□ -1.63
SDC4P-201ENST00000453285 PRB3Q04118 309 aaPredicted RBP4.88□□□□□ -1.63
SDC4P-201ENST00000453285 CATR1Q13166 79 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 DIAPH2-AS1Q14236 149 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 CLEC12BQ2HXU8 276 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 DEFB113Q30KQ7 82 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 LDLRAD2Q5SZI1 272 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 Q6ZRM9 215 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 ZNF695Q8IW36 515 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 SPAG16Q8N0X2 631 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 LRRC75A-AS1Q8N1F1 130 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 KIR3DL3Q8N743 410 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 ZNF383Q8NA42 475 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 ZBTB8BQ8NAP8 495 aaPredicted RBP4.88□□□□□ -1.63
SDC4P-201ENST00000453285 DRAXINQ8NBI3 349 aaPredicted RBP4.88□□□□□ -1.63
SDC4P-201ENST00000453285 BEND2Q8NDZ0 799 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 OR11H6Q8NGC7 330 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 OR4D5Q8NGN0 318 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 PPP1R1CQ8WVI7 109 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 TCTEX1D2Q8WW35 142 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 LSM10Q969L4 123 aaKnown RBP4.88□□□□□ -1.63
SDC4P-201ENST00000453285 GPR146Q96CH1 333 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 RAB39BQ96DA2 213 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 MBD6Q96DN6 1003 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 C1orf159Q96HA4 380 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 HYLS1Q96M11 299 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 SIRPDQ9H106 197 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 UNKLQ9H9P5 680 aaKnown RBP4.88□□□□□ -1.63
SDC4P-201ENST00000453285 LIN7CQ9NUP9 197 aaKnown RBP4.88□□□□□ -1.63
SDC4P-201ENST00000453285 ONECUT1Q9UBC0 465 aa4.88□□□□□ -1.63
SDC4P-201ENST00000453285 hCG_1809904A0A1W2PP81 198 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 A0A1W2PPE2 198 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 A0A1W2PR64 198 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 A0A1W2PRV1 198 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 HMSDA8MTL9 139 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 BUB1B-PAK6H3BSN5 160 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 RBFOX2O43251 390 aaKnown RBP eCLIP4.87□□□□□ -1.63
SDC4P-201ENST00000453285 FCGR3BO75015 233 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 S1PR2O95136 353 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 MPC2O95563 127 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 SERPINE2P07093 398 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 SLC25A4P12235 298 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 SLC25A6P12236 298 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 RPA2P15927 270 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 SLC25A16P16260 332 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 PSMB6P28072 239 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 THBS3P49746 956 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 PRRX1P54821 245 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 PAX8Q06710 450 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 ZNF816Q0VGE8 651 aaPredicted RBP4.87□□□□□ -1.63
SDC4P-201ENST00000453285 RAB32Q13637 225 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 IZUMO4Q1ZYL8 232 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 IAH1Q2TAA2 248 aaPredicted RBP4.87□□□□□ -1.63
SDC4P-201ENST00000453285 HLA-DRB5Q30154 266 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 LGALSLQ3ZCW2 172 aaPredicted RBP4.87□□□□□ -1.63
SDC4P-201ENST00000453285 MIDNQ504T8 468 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 OR2B11Q5JQS5 317 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 C11orf87Q6NUJ2 197 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 FAM71F2Q6NXP2 309 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 TMEM65Q6PI78 240 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 KRTAP1-3Q8IUG1 177 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 PNKDQ8N490 385 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 C9orf62Q8N4C0 152 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 OR5AN1Q8NGI8 311 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 OR4P4Q8NGL7 312 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 GRPEL2Q8TAA5 225 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 CD300LFQ8TDQ1 290 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 TMEM186Q96B77 213 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 RBMXL1Q96E39 390 aaKnown RBP4.87□□□□□ -1.63
SDC4P-201ENST00000453285 ADTRPQ96IZ2 230 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 TBX15Q96SF7 602 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 S1PR3Q99500 378 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 NABP2Q9BQ15 211 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 PDCD10Q9BUL8 212 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 CLEC7AQ9BXN2 247 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 C11orf1Q9H5F2 150 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 PLEKHA2Q9HB19 425 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 SIRT7Q9NRC8 400 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 BOLA1Q9Y3E2 137 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 INSIG2Q9Y5U4 225 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 KPTNQ9Y664 436 aa4.87□□□□□ -1.63
SDC4P-201ENST00000453285 NAV3Q8IVL0 2385 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms