RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 C11orf87Q6NUJ2 197 aa9.67□□□□□ -0.86
CPSF4-208ENST00000452047 ZNF562Q6V9R5 426 aa9.67□□□□□ -0.86
CPSF4-208ENST00000452047 OR1N2Q8NGR9 330 aa9.67□□□□□ -0.86
CPSF4-208ENST00000452047 CASTOR1Q8WTX7 329 aa9.67□□□□□ -0.86
CPSF4-208ENST00000452047 MAFIPQ8WZ33 124 aa9.67□□□□□ -0.86
CPSF4-208ENST00000452047 C5orf30Q96GV9 206 aa9.67□□□□□ -0.86
CPSF4-208ENST00000452047 OR5B12Q96R08 314 aa9.67□□□□□ -0.86
CPSF4-208ENST00000452047 TSNAXQ99598 290 aaKnown RBP9.67□□□□□ -0.86
CPSF4-208ENST00000452047 FAM103A1Q9BTL3 118 aaKnown RBP9.67□□□□□ -0.86
CPSF4-208ENST00000452047 OR2D2Q9H210 308 aa9.67□□□□□ -0.86
CPSF4-208ENST00000452047 TPSG1Q9NRR2 321 aa9.67□□□□□ -0.86
CPSF4-208ENST00000452047 ZNF230Q9UIE0 474 aaPredicted RBP9.67□□□□□ -0.86
CPSF4-208ENST00000452047 A3GALT2U3KPV4 340 aa9.67□□□□□ -0.86
CPSF4-208ENST00000452047 A0A075B6Q4 140 aa9.66□□□□□ -0.86
CPSF4-208ENST00000452047 SMIM30A4D0T7 59 aa9.66□□□□□ -0.86
CPSF4-208ENST00000452047 M0R1X1 148 aa9.66□□□□□ -0.86
CPSF4-208ENST00000452047 CA2P00918 260 aa9.66□□□□□ -0.86
CPSF4-208ENST00000452047 APOA2P02652 100 aa9.66□□□□□ -0.86
CPSF4-208ENST00000452047 OR8U9P0C7N5 309 aa9.66□□□□□ -0.86
CPSF4-208ENST00000452047 PSMB9P28065 219 aa9.66□□□□□ -0.86
CPSF4-208ENST00000452047 SSBP2P81877 361 aaPredicted RBP9.66□□□□□ -0.86
CPSF4-208ENST00000452047 DCTN2Q13561 401 aaKnown RBP9.66□□□□□ -0.86
CPSF4-208ENST00000452047 SRSF7Q16629 238 aaKnown RBP eCLIP9.66□□□□□ -0.86
CPSF4-208ENST00000452047 AKIRIN2Q53H80 203 aa9.66□□□□□ -0.86
CPSF4-208ENST00000452047 Q6ZS49 121 aa9.66□□□□□ -0.86
CPSF4-208ENST00000452047 PPP1R27Q86WC6 154 aa9.66□□□□□ -0.86
CPSF4-208ENST00000452047 OR10J5Q8NHC4 309 aa9.66□□□□□ -0.86
CPSF4-208ENST00000452047 ABHD5Q8WTS1 349 aa9.66□□□□□ -0.86
CPSF4-208ENST00000452047 CLCC1Q96S66 551 aa9.66□□□□□ -0.86
CPSF4-208ENST00000452047 ALX4Q9H161 411 aaPredicted RBP9.66□□□□□ -0.86
CPSF4-208ENST00000452047 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.66□□□□□ -0.86
CPSF4-208ENST00000452047 TXNL4BQ9NX01 149 aaKnown RBP9.66□□□□□ -0.86
CPSF4-208ENST00000452047 SDHAF2Q9NX18 166 aa9.66□□□□□ -0.86
CPSF4-208ENST00000452047 ELF5Q9UKW6 265 aaPredicted RBP9.66□□□□□ -0.86
CPSF4-208ENST00000452047 IGKV1D-8A0A087WSZ0 117 aa9.65□□□□□ -0.86
CPSF4-208ENST00000452047 METTL21EPA6NDL7 271 aa9.65□□□□□ -0.86
CPSF4-208ENST00000452047 A6NHS1 94 aa9.65□□□□□ -0.86
CPSF4-208ENST00000452047 NOTOA8MTQ0 251 aa9.65□□□□□ -0.86
CPSF4-208ENST00000452047 SLC25A17O43808 307 aa9.65□□□□□ -0.86
CPSF4-208ENST00000452047 IGLV2-23P01705 113 aa9.65□□□□□ -0.86
CPSF4-208ENST00000452047 LGALS1P09382 135 aaKnown RBP9.65□□□□□ -0.86
CPSF4-208ENST00000452047 RPS16P62249 146 aaKnown RBP9.65□□□□□ -0.86
CPSF4-208ENST00000452047 CD69Q07108 199 aa9.65□□□□□ -0.86
CPSF4-208ENST00000452047 TMEM267Q0VDI3 215 aaPredicted RBP9.65□□□□□ -0.86
CPSF4-208ENST00000452047 ZNF260Q3ZCT1 412 aa9.65□□□□□ -0.86
CPSF4-208ENST00000452047 ACTBL2Q562R1 376 aa9.65□□□□□ -0.86
CPSF4-208ENST00000452047 VAX1Q5SQQ9 334 aa9.65□□□□□ -0.86
CPSF4-208ENST00000452047 PYHIN1Q6K0P9 492 aa9.65□□□□□ -0.86
CPSF4-208ENST00000452047 LFNGQ8NES3 379 aa9.65□□□□□ -0.86
CPSF4-208ENST00000452047 FCGR1BQ92637 280 aa9.65□□□□□ -0.86
CPSF4-208ENST00000452047 ARPC1AQ92747 370 aa9.65□□□□□ -0.86
CPSF4-208ENST00000452047 FLYWCH2Q96CP2 140 aaKnown RBP9.65□□□□□ -0.86
CPSF4-208ENST00000452047 PRR25Q96S07 402 aa9.65□□□□□ -0.86
CPSF4-208ENST00000452047 SLC35D1Q9NTN3 355 aa9.65□□□□□ -0.86
CPSF4-208ENST00000452047 STUB1Q9UNE7 303 aa9.65□□□□□ -0.86
CPSF4-208ENST00000452047 LSM4Q9Y4Z0 139 aaKnown RBP9.65□□□□□ -0.86
CPSF4-208ENST00000452047 ARPC1BO15143 372 aaKnown RBP9.64□□□□□ -0.87
CPSF4-208ENST00000452047 CRYGBP07316 175 aa9.64□□□□□ -0.87
CPSF4-208ENST00000452047 DTYMKP23919 212 aa9.64□□□□□ -0.87
CPSF4-208ENST00000452047 ECI1P42126 302 aa9.64□□□□□ -0.87
CPSF4-208ENST00000452047 INSL3P51460 131 aa9.64□□□□□ -0.87
CPSF4-208ENST00000452047 UNQ5815/PRO19632Q6UWF5 114 aa9.64□□□□□ -0.87
CPSF4-208ENST00000452047 H1FOOQ8IZA3 346 aaPredicted RBP9.64□□□□□ -0.87
CPSF4-208ENST00000452047 DCUN1D4Q92564 292 aa9.64□□□□□ -0.87
CPSF4-208ENST00000452047 YTHDF1Q9BYJ9 559 aaKnown RBP9.64□□□□□ -0.87
CPSF4-208ENST00000452047 ATG5Q9H1Y0 275 aa9.64□□□□□ -0.87
CPSF4-208ENST00000452047 KMT2CQ8NEZ4 4911 aaKnown RBP9.64□□□□□ -0.87
CPSF4-208ENST00000452047 SORL1Q92673 2214 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 STAB2Q8WWQ8 2551 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 NBEAL2Q6ZNJ1 2754 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 IGHV4OR15-8A0A075B7B6 117 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 A0A087WW49 117 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 OVOL1O14753 267 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 TALDO1P37837 337 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 LGALS7P47929 136 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 SLURP1P55000 103 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 PJVKQ0ZLH3 352 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 ARFRP1Q13795 201 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 FXYD3Q14802 87 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 ARL6IP1Q15041 203 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 TMEM177Q53S58 311 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 ZNF773Q6PK81 442 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 TPRA1Q86W33 373 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 GRPEL2Q8TAA5 225 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 DDB2Q92466 427 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 DLX4Q92988 240 aaPredicted RBP9.63□□□□□ -0.87
CPSF4-208ENST00000452047 HARBI1Q96MB7 349 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 GINS4Q9BRT9 223 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 Q9H521 79 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 SLA2Q9H6Q3 261 aa9.63□□□□□ -0.87
CPSF4-208ENST00000452047 TNCP24821 2201 aa9.62□□□□□ -0.87
CPSF4-208ENST00000452047 SRRM4A7MD48 611 aaKnown RBP9.62□□□□□ -0.87
CPSF4-208ENST00000452047 LINC00473A8K010 186 aa9.62□□□□□ -0.87
CPSF4-208ENST00000452047 LINC01619G3V211 115 aa9.62□□□□□ -0.87
CPSF4-208ENST00000452047 IGHV3-11P01762 117 aa9.62□□□□□ -0.87
CPSF4-208ENST00000452047 DUTP33316 252 aaKnown RBP9.62□□□□□ -0.87
CPSF4-208ENST00000452047 TPPP2P59282 170 aa9.62□□□□□ -0.87
CPSF4-208ENST00000452047 TAGLNQ01995 201 aaKnown RBP9.62□□□□□ -0.87
CPSF4-208ENST00000452047 MRGPRG-AS1Q2M3A8 158 aa9.62□□□□□ -0.87
CPSF4-208ENST00000452047 CDNFQ49AH0 187 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms