RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 GNG2P59768 71 aa7.55□□□□□ -1.2
USP54-207ENST00000451492 CX3CL1P78423 397 aa7.55□□□□□ -1.2
USP54-207ENST00000451492 PSG5Q15238 335 aa7.55□□□□□ -1.2
USP54-207ENST00000451492 IDNKQ5T6J7 187 aa7.55□□□□□ -1.2
USP54-207ENST00000451492 UNQ5815/PRO19632Q6UWF5 114 aa7.55□□□□□ -1.2
USP54-207ENST00000451492 PDPNQ86YL7 162 aa7.55□□□□□ -1.2
USP54-207ENST00000451492 OR11H1Q8NG94 326 aa7.55□□□□□ -1.2
USP54-207ENST00000451492 OR5AN1Q8NGI8 311 aa7.55□□□□□ -1.2
USP54-207ENST00000451492 OR5M8Q8NGP6 311 aa7.55□□□□□ -1.2
USP54-207ENST00000451492 C4orf3Q8WVX3 66 aa7.55□□□□□ -1.2
USP54-207ENST00000451492 PTX4Q96A99 478 aa7.55□□□□□ -1.2
USP54-207ENST00000451492 HARBI1Q96MB7 349 aa7.55□□□□□ -1.2
USP54-207ENST00000451492 MS4A10Q96PG2 267 aa7.55□□□□□ -1.2
USP54-207ENST00000451492 ST6GALNAC5Q9BVH7 336 aa7.55□□□□□ -1.2
USP54-207ENST00000451492 YTHDF1Q9BYJ9 559 aaKnown RBP7.55□□□□□ -1.2
USP54-207ENST00000451492 SDHAF2Q9NX18 166 aa7.55□□□□□ -1.2
USP54-207ENST00000451492 TRBV6-7A0A0A0MS04 114 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 SOX15O60248 233 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 RBBP9O75884 186 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 IGHV3-11P01762 117 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 FCER2P06734 321 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 APELAP0DMC3 54 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 NFYAP23511 347 aaPredicted RBP7.54□□□□□ -1.2
USP54-207ENST00000451492 SLC6A1P30531 599 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 LSM3P62310 102 aaKnown RBP7.54□□□□□ -1.2
USP54-207ENST00000451492 DEFA5Q01523 94 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 CBX3Q13185 183 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 OR2B11Q5JQS5 317 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 PPP1R27Q86WC6 154 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 ZNF491Q8N8L2 437 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 BVESQ8NE79 360 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 LFNGQ8NES3 379 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 OR5H6Q8NGV6 325 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 FLYWCH2Q96CP2 140 aaKnown RBP7.54□□□□□ -1.2
USP54-207ENST00000451492 TSNAXQ99598 290 aaKnown RBP7.54□□□□□ -1.2
USP54-207ENST00000451492 CENPOQ9BU64 300 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 MCRIP2Q9BUT9 160 aaKnown RBP7.54□□□□□ -1.2
USP54-207ENST00000451492 GPR61Q9BZJ8 451 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 GHITMQ9H3K2 345 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 ZNF355PQ9NSJ1 428 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 RHBDL2Q9NX52 303 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 VSIG4Q9Y279 399 aa7.54□□□□□ -1.2
USP54-207ENST00000451492 MEIS3P1A6NDR6 274 aa7.53□□□□□ -1.2
USP54-207ENST00000451492 SEC14L6B5MCN3 397 aa7.53□□□□□ -1.2
USP54-207ENST00000451492 SHOXO15266 292 aa7.53□□□□□ -1.2
USP54-207ENST00000451492 CNIH1O95406 144 aa7.53□□□□□ -1.2
USP54-207ENST00000451492 IGLV1-40P01703 118 aa7.53□□□□□ -1.2
USP54-207ENST00000451492 RAB9AP51151 201 aa7.53□□□□□ -1.2
USP54-207ENST00000451492 SLURP1P55000 103 aa7.53□□□□□ -1.2
USP54-207ENST00000451492 TPPP2P59282 170 aa7.53□□□□□ -1.2
USP54-207ENST00000451492 PJVKQ0ZLH3 352 aa7.53□□□□□ -1.2
USP54-207ENST00000451492 KCTD21Q4G0X4 260 aa7.53□□□□□ -1.2
USP54-207ENST00000451492 ACTBL2Q562R1 376 aa7.53□□□□□ -1.2
USP54-207ENST00000451492 HACD4Q5VWC8 232 aa7.53□□□□□ -1.2
USP54-207ENST00000451492 ZNF660Q6AZW8 331 aaPredicted RBP7.53□□□□□ -1.2
USP54-207ENST00000451492 TPRA1Q86W33 373 aa7.53□□□□□ -1.2
USP54-207ENST00000451492 RNF152Q8N8N0 203 aa7.53□□□□□ -1.2
USP54-207ENST00000451492 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.53□□□□□ -1.2
USP54-207ENST00000451492 ARPC1AQ92747 370 aa7.53□□□□□ -1.2
USP54-207ENST00000451492 PRR25Q96S07 402 aa7.53□□□□□ -1.2
USP54-207ENST00000451492 FOXA2Q9Y261 457 aaPredicted RBP7.53□□□□□ -1.2
USP54-207ENST00000451492 COL7A1Q02388 2944 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 LINC00473A8K010 186 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 I3L521 148 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 ARPC1BO15143 372 aaKnown RBP7.52□□□□□ -1.21
USP54-207ENST00000451492 SSX5O60225 188 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 TUSC2O75896 110 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 SPDEFO95238 335 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 LY86O95711 162 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 CRYZL1O95825 349 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 OR8U8P0C7N1 319 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 EGR2P11161 476 aaPredicted RBP7.52□□□□□ -1.21
USP54-207ENST00000451492 PTHLHP12272 177 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 DTYMKP23919 212 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 ARPC4P59998 168 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 TAGLNQ01995 201 aaKnown RBP7.52□□□□□ -1.21
USP54-207ENST00000451492 ZNF616Q08AN1 781 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 EGFEM1PQ0D2K5 195 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 FXYD3Q14802 87 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 ARL6IP1Q15041 203 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 RTL8BQ17RB0 113 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 ZNF260Q3ZCT1 412 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 C9orf66Q5T8R8 295 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 IDO2Q6ZQW0 420 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 H1FOOQ8IZA3 346 aaPredicted RBP7.52□□□□□ -1.21
USP54-207ENST00000451492 MINDY2Q8NBR6 621 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 OR1N2Q8NGR9 330 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 MYOZ3Q8TDC0 251 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 SLC25A38Q96DW6 304 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 UBE2E2Q96LR5 201 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 PHB2Q99623 299 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 DCUN1D5Q9BTE7 237 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 TOLLIPQ9H0E2 274 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 ZNF580Q9UK33 172 aa7.52□□□□□ -1.21
USP54-207ENST00000451492 TRAV18A0A075B6X5 111 aa7.51□□□□□ -1.21
USP54-207ENST00000451492 IGHV4OR15-8A0A075B7B6 117 aa7.51□□□□□ -1.21
USP54-207ENST00000451492 A0A087WW49 117 aa7.51□□□□□ -1.21
USP54-207ENST00000451492 SCGNO76038 276 aa7.51□□□□□ -1.21
USP54-207ENST00000451492 IGLV2-23P01705 113 aa7.51□□□□□ -1.21
USP54-207ENST00000451492 TRGV3P03979 118 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms