RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 INAFM1C9JVW0 142 aa11.8□□□□□ -0.52
SHANK2-210ENST00000449116 RPL30P62888 115 aaKnown RBP11.8□□□□□ -0.52
SHANK2-210ENST00000449116 CATR1Q13166 79 aa11.8□□□□□ -0.52
SHANK2-210ENST00000449116 DEFB112Q30KQ8 113 aa11.8□□□□□ -0.52
SHANK2-210ENST00000449116 PLET1Q6UQ28 207 aa11.8□□□□□ -0.52
SHANK2-210ENST00000449116 GLDNQ6ZMI3 551 aaPredicted RBP11.8□□□□□ -0.52
SHANK2-210ENST00000449116 MOB3BQ86TA1 216 aa11.8□□□□□ -0.52
SHANK2-210ENST00000449116 TBC1D26Q86UD7 250 aa11.8□□□□□ -0.52
SHANK2-210ENST00000449116 CENPSQ8N2Z9 138 aa11.8□□□□□ -0.52
SHANK2-210ENST00000449116 ZNF383Q8NA42 475 aa11.8□□□□□ -0.52
SHANK2-210ENST00000449116 ADAD2Q8NCV1 583 aaKnown RBP11.8□□□□□ -0.52
SHANK2-210ENST00000449116 OR5AN1Q8NGI8 311 aa11.8□□□□□ -0.52
SHANK2-210ENST00000449116 H0YJW9 148 aa11.79□□□□□ -0.52
SHANK2-210ENST00000449116 TIMM23O14925 209 aa11.79□□□□□ -0.52
SHANK2-210ENST00000449116 MPPED1O15442 326 aa11.79□□□□□ -0.52
SHANK2-210ENST00000449116 APOA2P02652 100 aa11.79□□□□□ -0.52
SHANK2-210ENST00000449116 H2AFB2P0C5Z0 115 aa11.79□□□□□ -0.52
SHANK2-210ENST00000449116 AKR1C4P17516 323 aa11.79□□□□□ -0.52
SHANK2-210ENST00000449116 SRD5A1P18405 259 aa11.79□□□□□ -0.52
SHANK2-210ENST00000449116 BRS3P32247 399 aa11.79□□□□□ -0.52
SHANK2-210ENST00000449116 LINC00205P59089 165 aa11.79□□□□□ -0.52
SHANK2-210ENST00000449116 TAS2R31P59538 309 aa11.79□□□□□ -0.52
SHANK2-210ENST00000449116 TAGLNQ01995 201 aaKnown RBP11.79□□□□□ -0.52
SHANK2-210ENST00000449116 HABP2Q14520 560 aaPredicted RBP11.79□□□□□ -0.52
SHANK2-210ENST00000449116 SLC25A42Q86VD7 318 aa11.79□□□□□ -0.52
SHANK2-210ENST00000449116 OR51H1Q8NH63 302 aa11.79□□□□□ -0.52
SHANK2-210ENST00000449116 TCTEX1D2Q8WW35 142 aa11.79□□□□□ -0.52
SHANK2-210ENST00000449116 DDB2Q92466 427 aa11.79□□□□□ -0.52
SHANK2-210ENST00000449116 CFHR4Q92496 578 aa11.79□□□□□ -0.52
SHANK2-210ENST00000449116 TMEM230Q96A57 120 aa11.79□□□□□ -0.52
SHANK2-210ENST00000449116 NAA60Q9H7X0 242 aa11.79□□□□□ -0.52
SHANK2-210ENST00000449116 LIN7CQ9NUP9 197 aaKnown RBP11.79□□□□□ -0.52
SHANK2-210ENST00000449116 PRELID3BQ9Y3B1 194 aa11.79□□□□□ -0.52
SHANK2-210ENST00000449116 NAV3Q8IVL0 2385 aa11.79□□□□□ -0.52
SHANK2-210ENST00000449116 TEX13DA0A0J9YY54 714 aaPredicted RBP11.78□□□□□ -0.52
SHANK2-210ENST00000449116 MDFIC2A0A1B0GVS7 189 aa11.78□□□□□ -0.52
SHANK2-210ENST00000449116 CRYM-AS1A6NIL9 109 aa11.78□□□□□ -0.52
SHANK2-210ENST00000449116 VGLL3A8MV65 326 aa11.78□□□□□ -0.52
SHANK2-210ENST00000449116 SPNP16150 400 aa11.78□□□□□ -0.52
SHANK2-210ENST00000449116 F2RP25116 425 aa11.78□□□□□ -0.52
SHANK2-210ENST00000449116 CD1BP29016 333 aa11.78□□□□□ -0.52
SHANK2-210ENST00000449116 MC5RP33032 325 aa11.78□□□□□ -0.52
SHANK2-210ENST00000449116 DYNLT3P51808 116 aa11.78□□□□□ -0.52
SHANK2-210ENST00000449116 UBE2MP61081 183 aaKnown RBP11.78□□□□□ -0.52
SHANK2-210ENST00000449116 AANATQ16613 207 aa11.78□□□□□ -0.52
SHANK2-210ENST00000449116 LRRC75BQ2VPJ9 315 aa11.78□□□□□ -0.52
SHANK2-210ENST00000449116 TMEM128Q5BJH2 165 aa11.78□□□□□ -0.52
SHANK2-210ENST00000449116 C11orf88Q6PI97 169 aa11.78□□□□□ -0.52
SHANK2-210ENST00000449116 CCBE1Q6UXH8 406 aaPredicted RBP11.78□□□□□ -0.52
SHANK2-210ENST00000449116 SGPP2Q8IWX5 399 aa11.78□□□□□ -0.52
SHANK2-210ENST00000449116 ZDHHC16Q969W1 377 aa11.78□□□□□ -0.52
SHANK2-210ENST00000449116 PRDM13Q9H4Q3 707 aa11.78□□□□□ -0.52
SHANK2-210ENST00000449116 SLC35D1Q9NTN3 355 aa11.78□□□□□ -0.52
SHANK2-210ENST00000449116 WASHC3Q9Y3C0 194 aa11.78□□□□□ -0.52
SHANK2-210ENST00000449116 IGHV3-72A0A0B4J1Y9 119 aa11.77□□□□□ -0.53
SHANK2-210ENST00000449116 C3orf85A0A1B0GTC6 90 aa11.77□□□□□ -0.53
SHANK2-210ENST00000449116 PEX14O75381 377 aa11.77□□□□□ -0.53
SHANK2-210ENST00000449116 RRASP10301 218 aa11.77□□□□□ -0.53
SHANK2-210ENST00000449116 ANXA7P20073 488 aaKnown RBP11.77□□□□□ -0.53
SHANK2-210ENST00000449116 KIR2DS2P43631 304 aa11.77□□□□□ -0.53
SHANK2-210ENST00000449116 RAB13P51153 203 aa11.77□□□□□ -0.53
SHANK2-210ENST00000449116 MECP2P51608 486 aaKnown RBP11.77□□□□□ -0.53
SHANK2-210ENST00000449116 DHODHQ02127 395 aa11.77□□□□□ -0.53
SHANK2-210ENST00000449116 OXA1LQ15070 435 aa11.77□□□□□ -0.53
SHANK2-210ENST00000449116 RTL8BQ17RB0 113 aa11.77□□□□□ -0.53
SHANK2-210ENST00000449116 TUSC1Q2TAM9 212 aa11.77□□□□□ -0.53
SHANK2-210ENST00000449116 PDPNQ86YL7 162 aa11.77□□□□□ -0.53
SHANK2-210ENST00000449116 TCTEX1D1Q8N7M0 179 aa11.77□□□□□ -0.53
SHANK2-210ENST00000449116 ZNF48Q96MX3 618 aaPredicted RBP11.77□□□□□ -0.53
SHANK2-210ENST00000449116 SSX3Q99909 188 aa11.77□□□□□ -0.53
SHANK2-210ENST00000449116 MARVELD1Q9BSK0 173 aa11.77□□□□□ -0.53
SHANK2-210ENST00000449116 ALX4Q9H161 411 aaPredicted RBP11.77□□□□□ -0.53
SHANK2-210ENST00000449116 FAM90A9PA6NNJ1 464 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 INMT-MINDY4F8WBC2 141 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 H0Y980 276 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 H7C2Y5 167 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 RBFOX2O43251 390 aaKnown RBP eCLIP11.76□□□□□ -0.538e-7■■■□□ 16.8
SHANK2-210ENST00000449116 FCGR3BO75015 233 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 B3GALNT1O75752 331 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 VENTXO95231 258 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 IGKV1D-33P01593 117 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 IGKV1-33P01594 117 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 SNRNP70P08621 437 aaKnown RBP11.76□□□□□ -0.53
SHANK2-210ENST00000449116 OR4E1P0C645 316 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 RAG2P55895 527 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 RAB25P57735 213 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 CBX3Q13185 183 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 TRIM16LQ309B1 348 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 OR2B11Q5JQS5 317 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 Q6YL49 198 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 THNSL2Q86YJ6 484 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 SPAG16Q8N0X2 631 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 MINDY2Q8NBR6 621 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 CD300LFQ8TDQ1 290 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 CAPSLQ8WWF8 208 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 GALNT14Q96FL9 552 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 KCNIP3Q9Y2W7 256 aa11.76□□□□□ -0.53
SHANK2-210ENST00000449116 RAMP3O60896 148 aa11.75□□□□□ -0.53
SHANK2-210ENST00000449116 CRLF1O75462 422 aa11.75□□□□□ -0.53
SHANK2-210ENST00000449116 OR5AC1P0C628 307 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms