RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 RGPD4Q7Z3J3 1758 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 DOCK1Q14185 1865 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 TMEM250H0YL14 139 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 HLA-DRB1P01911 266 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 AMY1AP04745 511 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 BTF3P20290 206 aaKnown RBP6.71□□□□□ -1.34
NEDD9-204ENST00000448183 TNFRSF9Q07011 255 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 LINC01590Q5TEZ4 76 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 MAFAQ8NHW3 353 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-204ENST00000448183 LSM10Q969L4 123 aaKnown RBP6.71□□□□□ -1.34
NEDD9-204ENST00000448183 SH3BGRL3Q9H299 93 aa6.71□□□□□ -1.34
NEDD9-204ENST00000448183 ZNF430Q9H8G1 570 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-204ENST00000448183 A0A1W2PQF6 199 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 TMEM14DPA8MWL7 114 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 DLL1O00548 723 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 C8orf88P0DMB2 117 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 UCP2P55851 309 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 UCP3P55916 312 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 RPL8P62917 257 aaKnown RBP6.7□□□□□ -1.34
NEDD9-204ENST00000448183 KCNMB1Q16558 191 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 C2orf68Q2NKX9 166 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 TMEM78Q5T7P6 136 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 Q96M66 194 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 PKIBQ9C010 78 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 SMOC1Q9H4F8 434 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 DLL3Q9NYJ7 618 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 MCM3APO60318 1980 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 TRBV9A0A0B4J1U6 114 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 C16orf97H3BN30 126 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 ZNF708P17019 499 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 SSTR5P35346 364 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 MMD2Q8IY49 270 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 ZNF714Q96N38 554 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 MIEN1Q9BRT3 115 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 CFHR5Q9BXR6 569 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 FSCN3Q9NQT6 498 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 PLAUP00749 431 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 FHITP49789 147 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 NUBP1P53384 320 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 HSPE1P61604 102 aaKnown RBP6.7□□□□□ -1.34
NEDD9-204ENST00000448183 TMEM187Q14656 261 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 ECSCRQ19T08 205 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 LEMD1Q68G75 181 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 OR4A5Q8NH83 315 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 SMIM8Q96KF7 97 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 TTTY12Q9BZ98 90 aa6.7□□□□□ -1.34
NEDD9-204ENST00000448183 CARHSP1Q9Y2V2 147 aaKnown RBP6.7□□□□□ -1.34
NEDD9-204ENST00000448183 ZNF324O75467 553 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-204ENST00000448183 CSRP3P50461 194 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 KIAA1644Q3SXP7 199 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 TMEM177Q53S58 311 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 APOBEC4Q8WW27 367 aaKnown RBP6.69□□□□□ -1.34
NEDD9-204ENST00000448183 PSMG3Q9BT73 122 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-204ENST00000448183 G6PC2Q9NQR9 355 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 ZNF71Q9NQZ8 489 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-204ENST00000448183 CDX4O14627 284 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-204ENST00000448183 IGHV4-34P06331 123 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 ARL14EPLP0DKL9 152 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 ID1P41134 155 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 RND2P52198 227 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 FXYD3Q14802 87 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 SAXO1Q8IYX7 474 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 SFXN3Q9BWM7 321 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 DNAJC4Q9NNZ3 241 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 TNFRSF19Q9NS68 423 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 ZG16O60844 167 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 CA7P43166 264 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 PCP4P48539 62 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 SMAGPQ0VAQ4 97 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 ZNF506Q5JVG8 444 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 RIPPLY2Q5TAB7 128 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 TMEM183AQ8IXX5 376 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 OR10AG1Q8NH19 301 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 CCL13Q99616 98 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 A0A1B0GV90 55 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 MARCH11A6NNE9 402 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 CRYBB3P26998 211 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 CCL8P80075 99 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 ZNF658BQ4V348 819 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-204ENST00000448183 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-204ENST00000448183 PGLYRP4Q96LB8 373 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 GUCD1Q96NT3 240 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 GPHA2Q96T91 129 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 DUSP15Q9H1R2 295 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-204ENST00000448183 MAP1LC3AQ9H492 121 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 AKAP6Q13023 2319 aa6.69□□□□□ -1.34
NEDD9-204ENST00000448183 GVINP1Q7Z2Y8 2422 aa6.68□□□□□ -1.34
NEDD9-204ENST00000448183 SHISA3A0PJX4 238 aa6.68□□□□□ -1.34
NEDD9-204ENST00000448183 ODAMA1E959 279 aa6.68□□□□□ -1.34
NEDD9-204ENST00000448183 GRIFINA4D1Z8 144 aa6.68□□□□□ -1.34
NEDD9-204ENST00000448183 A8MXK9 166 aa6.68□□□□□ -1.34
NEDD9-204ENST00000448183 C5orf67F2Z3F1 127 aa6.68□□□□□ -1.34
NEDD9-204ENST00000448183 VENTXO95231 258 aa6.68□□□□□ -1.34
NEDD9-204ENST00000448183 FOXL2P58012 376 aa6.68□□□□□ -1.34
NEDD9-204ENST00000448183 ERVFRD-1P60508 538 aa6.68□□□□□ -1.34
NEDD9-204ENST00000448183 P2RY6Q15077 328 aa6.68□□□□□ -1.34
NEDD9-204ENST00000448183 C2orf83Q53S99 150 aa6.68□□□□□ -1.34
NEDD9-204ENST00000448183 HCP5Q6MZN7 132 aa6.68□□□□□ -1.34
NEDD9-204ENST00000448183 DIRC2Q96SL1 478 aa6.68□□□□□ -1.34
NEDD9-204ENST00000448183 C19orf24Q9BVV8 132 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms