RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 ARMC1Q9NVT9 282 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 TECRQ9NZ01 308 aaKnown RBP4.35□□□□□ -1.71
USP49-205ENST00000448078 CNOT2Q9NZN8 540 aaKnown RBP4.35□□□□□ -1.71
USP49-205ENST00000448078 PEF1Q9UBV8 284 aaKnown RBP4.35□□□□□ -1.71
USP49-205ENST00000448078 ENOPH1Q9UHY7 261 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 TP53TG1Q9Y2A0 90 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 KCNK7Q9Y2U2 307 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 V9GYQ6 96 aa4.35□□□□□ -1.71
USP49-205ENST00000448078 STARD9Q9P2P6 4700 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 A0A0J9YWU9 116 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 A0A1B0GTI1 187 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 TMEM30CPA0ZSE6 113 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 H0YJX3 145 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 H3BUA1 57 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 NME4O00746 187 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 XRCC3O43542 346 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 LANCL1O43813 399 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 ORC5O43913 435 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 OR2A4O95047 310 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 RPP14O95059 124 aaKnown RBP4.34□□□□□ -1.71
USP49-205ENST00000448078 FAM107AO95990 144 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 UBCP0CG48 685 aaKnown RBP4.34□□□□□ -1.71
USP49-205ENST00000448078 ATF1P18846 271 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 FASP25445 335 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 BLVRBP30043 206 aaPredicted RBP4.34□□□□□ -1.71
USP49-205ENST00000448078 MC5RP33032 325 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 LGALS7P47929 136 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 HCCSP53701 268 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 PSME3P61289 254 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 GK3PQ14409 553 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 GINS1Q14691 196 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 ODF4Q2M2E3 257 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 TMEM244Q5VVB8 128 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 CD200R1LQ6Q8B3 271 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 HACD2Q6Y1H2 254 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 SLC25A48Q6ZT89 311 aaKnown RBP4.34□□□□□ -1.71
USP49-205ENST00000448078 LYG2Q86SG7 212 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 SLC38A6Q8IZM9 456 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 TCEANCQ8N8B7 351 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 OR9Q2Q8NGE9 314 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 OR8D4Q8NGM9 314 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 NEK7Q8TDX7 302 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 USMG5Q96IX5 58 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 NSL1Q96IY1 281 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 OPALINQ96PE5 141 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 SPACA5Q96QH8 159 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 CNN2Q99439 309 aaKnown RBP4.34□□□□□ -1.71
USP49-205ENST00000448078 S100A13Q99584 98 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 APOL4Q9BPW4 351 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 NABP2Q9BQ15 211 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 C6orf62Q9GZU0 229 aaPredicted RBP4.34□□□□□ -1.71
USP49-205ENST00000448078 SAR1AQ9NR31 198 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 KCNIP1Q9NZI2 227 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 ING4Q9UNL4 249 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 SAMHD1Q9Y3Z3 626 aaKnown RBP4.34□□□□□ -1.71
USP49-205ENST00000448078 LRRC42Q9Y546 428 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 NUBP2Q9Y5Y2 271 aa4.34□□□□□ -1.71
USP49-205ENST00000448078 IGKV1-27A0A075B6S5 117 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 IGHV7-81A0A0B4J1V7 117 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 GNGT2O14610 69 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 EDF1O60869 148 aaKnown RBP4.33□□□□□ -1.72
USP49-205ENST00000448078 SCGB1D1O95968 90 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 MRPL3P09001 348 aaKnown RBP4.33□□□□□ -1.72
USP49-205ENST00000448078 COX4I1P13073 169 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 CCL1P22362 96 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 MAGEA2P43356 314 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 KRTAP10-7P60409 375 aaPredicted RBP4.33□□□□□ -1.72
USP49-205ENST00000448078 CXCR4P61073 352 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 CX3CL1P78423 397 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 RSU1Q15404 277 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 C6orf183Q5T699 404 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 Q6P435 159 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 TRAT1Q6PIZ9 186 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 ZNF562Q6V9R5 426 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 PLEKHG7Q6ZR37 379 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 Q6ZSR3 168 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 UTS2BQ765I0 119 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 FAM220AQ7Z4H9 259 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 TMEM104Q8NE00 496 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 NPBQ8NG41 125 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 OR52B4Q8NGK2 314 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 OR5D14Q8NGL3 314 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 CNIH3Q8TBE1 160 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 GIPC3Q8TF64 312 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 FGGYQ96C11 551 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 MRPS24Q96EL2 167 aaKnown RBP4.33□□□□□ -1.72
USP49-205ENST00000448078 COQ2Q96H96 371 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 RDH12Q96NR8 316 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 GPER1Q99527 375 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 RNF5Q99942 180 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 OVOL2Q9BRP0 275 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 PPIL3Q9H2H8 161 aaKnown RBP4.33□□□□□ -1.72
USP49-205ENST00000448078 CHMP1AQ9HD42 196 aaPredicted RBP4.33□□□□□ -1.72
USP49-205ENST00000448078 PAK1IP1Q9NWT1 392 aaPredicted RBP4.33□□□□□ -1.72
USP49-205ENST00000448078 NDE1Q9NXR1 346 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 TAS2R1Q9NYW7 299 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 TRAPPC2LQ9UL33 140 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 KLHDC2Q9Y2U9 406 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 MUC4Q99102 2169 aa4.33□□□□□ -1.72
USP49-205ENST00000448078 A0A1W2PP11 408 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms