RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 MRPS16Q9Y3D3 137 aaKnown RBP2.51□□□□□ -2.01
PMS1-216ENST00000447734 KIF25-AS1Q9Y6Z4 181 aa2.51□□□□□ -2.01
PMS1-216ENST00000447734 MYO5BQ9ULV0 1848 aa2.51□□□□□ -2.01
PMS1-216ENST00000447734 PTPRTO14522 1441 aa2.51□□□□□ -2.01
PMS1-216ENST00000447734 DCCP43146 1447 aa2.51□□□□□ -2.01
PMS1-216ENST00000447734 ZNF318Q5VUA4 2279 aa2.51□□□□□ -2.01
PMS1-216ENST00000447734 NUP214P35658 2090 aaPredicted RBP2.5□□□□□ -2.01
PMS1-216ENST00000447734 TRAV26-2A0A0B4J265 109 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 FUOMA2VDF0 154 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 PINLYPA6NC86 204 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 LINC00862A6NCI5 91 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 OR11H12B2RN74 326 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 CCNKO75909 580 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 S1PR2O95136 353 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 IGKV3-15P01624 115 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 GUSBP08236 651 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 IFI30P13284 250 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 IDO1P14902 403 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 NTF3P20783 257 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 DSCR10P59022 87 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 DEFA1P59665 94 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 HSPE1P61604 102 aaKnown RBP2.5□□□□□ -2.01
PMS1-216ENST00000447734 GNA12Q03113 381 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 CAV1Q03135 178 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 BSPH1Q075Z2 132 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 IL15RAQ13261 267 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 ENDOGQ14249 297 aaKnown RBP2.5□□□□□ -2.01
PMS1-216ENST00000447734 Q5W150 140 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 SMARCD3Q6STE5 483 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 UMODL1-AS1Q8N2C9 162 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 STX19Q8N4C7 294 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 ZNF433Q8N7K0 673 aaPredicted RBP2.5□□□□□ -2.01
PMS1-216ENST00000447734 ZFP62Q8NB50 900 aaPredicted RBP2.5□□□□□ -2.01
PMS1-216ENST00000447734 OR11H1Q8NG94 326 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 OR8B12Q8NGG6 310 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 OR11H2Q8NH07 326 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 GNPDA2Q8TDQ7 276 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 CT55Q8WUE5 264 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 RBPMSQ93062 196 aaKnown RBP2.5□□□□□ -2.01
PMS1-216ENST00000447734 C12orf43Q96C57 262 aaKnown RBP2.5□□□□□ -2.01
PMS1-216ENST00000447734 GNPNAT1Q96EK6 184 aaPredicted RBP2.5□□□□□ -2.01
PMS1-216ENST00000447734 TBX5Q99593 518 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 CCL13Q99616 98 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 B9D2Q9BPU9 175 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 GINS3Q9BRX5 216 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 GABARAPL1Q9H0R8 117 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 PRTFDC1Q9NRG1 225 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 COQ4Q9Y3A0 265 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 TIMM22Q9Y584 194 aa2.5□□□□□ -2.01
PMS1-216ENST00000447734 AHDC1Q5TGY3 1603 aaPredicted RBP2.5□□□□□ -2.01
PMS1-216ENST00000447734 IGLV4-69A0A075B6H9 119 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 IGKV1-12A0A0C4DH73 117 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 IGLL5B9A064 214 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 PANO1I0J062 215 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 GPR31O00270 319 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 CRYZL1O95825 349 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 PDYNP01213 254 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 IGKV1D-12P01611 117 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 IGHG2P01859 326 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 SERPINE1P05121 402 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 CRHP06850 196 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 LINC00869P0C866 280 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 SULT1A3P0DMM9 295 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 SULT1A4P0DMN0 295 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 OPRM1P35372 400 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 S100A12P80511 92 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 HOXC5Q00444 222 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 GRINAQ7Z429 371 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 PHF13Q86YI8 300 aaPredicted RBP2.49□□□□□ -2.01
PMS1-216ENST00000447734 SGPP2Q8IWX5 399 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 MKXQ8IYA7 352 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 GDPD1Q8N9F7 314 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 OR11G2Q8NGC1 345 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 OR11H6Q8NGC7 330 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 OR10A6Q8NH74 314 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 FRZBQ92765 325 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 PYURFQ96I23 114 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 RNF5Q99942 180 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 TMEM147Q9BVK8 224 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 COMMD5Q9GZQ3 224 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 ABCG5Q9H222 651 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 MIXL1Q9H2W2 232 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 GPR84Q9NQS5 396 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 NDUFAF1Q9Y375 327 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 OR51B4Q9Y5P0 310 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 SVILO95425 2214 aa2.49□□□□□ -2.01
PMS1-216ENST00000447734 PLXNB3Q9ULL4 1909 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 IGSF9BQ9UPX0 1349 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 TSTD3H0UI37 97 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 COX7A2LO14548 114 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 HMGB3O15347 200 aaKnown RBP2.48□□□□□ -2.01
PMS1-216ENST00000447734 CD7P09564 240 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 CGB3P0DN86 165 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 CGB7P0DN87 165 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 ZNF133P52736 654 aaPredicted RBP2.48□□□□□ -2.01
PMS1-216ENST00000447734 AKR1C2P52895 323 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 RPS20P60866 119 aaKnown RBP2.48□□□□□ -2.01
PMS1-216ENST00000447734 TNFAIP6P98066 277 aaPredicted RBP2.48□□□□□ -2.01
PMS1-216ENST00000447734 GRK1Q15835 563 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 TBPL2Q6SJ96 375 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms