RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 AGPAT2O15120 278 aa16.14■□□□□ 0.17
FAM3A-215ENST00000447601 TMPRSS2O15393 492 aa16.14■□□□□ 0.17
FAM3A-215ENST00000447601 RBFOX2O43251 390 aaKnown RBP eCLIP16.14■□□□□ 0.17
FAM3A-215ENST00000447601 C1QL1O75973 258 aa16.14■□□□□ 0.17
FAM3A-215ENST00000447601 KIR2DS2P43631 304 aa16.14■□□□□ 0.17
FAM3A-215ENST00000447601 ZNF134P52741 427 aa16.14■□□□□ 0.17
FAM3A-215ENST00000447601 FAM213BQ8TBF2 198 aa16.14■□□□□ 0.17
FAM3A-215ENST00000447601 MS4A5Q9H3V2 200 aa16.14■□□□□ 0.17
FAM3A-215ENST00000447601 IDI2-AS1Q9NZ38 188 aa16.14■□□□□ 0.17
FAM3A-215ENST00000447601 FAM90A27PA6NNH2 459 aa16.13■□□□□ 0.17
FAM3A-215ENST00000447601 RNASEK-C17orf49H0YIS7 233 aa16.13■□□□□ 0.17
FAM3A-215ENST00000447601 FCGR3BO75015 233 aa16.13■□□□□ 0.17
FAM3A-215ENST00000447601 HPRT1P00492 218 aa16.13■□□□□ 0.17
FAM3A-215ENST00000447601 METTL15P1P0C7V9 234 aa16.13■□□□□ 0.17
FAM3A-215ENST00000447601 FHITP49789 147 aa16.13■□□□□ 0.17
FAM3A-215ENST00000447601 DVL1P1P54792 670 aaPredicted RBP16.13■□□□□ 0.17
FAM3A-215ENST00000447601 BTN1A1Q13410 526 aa16.13■□□□□ 0.17
FAM3A-215ENST00000447601 SPANXN5Q5MJ07 72 aa16.13■□□□□ 0.17
FAM3A-215ENST00000447601 C10orf91Q5T1B1 145 aa16.13■□□□□ 0.17
FAM3A-215ENST00000447601 SLC25A24Q6NUK1 477 aa16.13■□□□□ 0.17
FAM3A-215ENST00000447601 TCF23Q7RTU1 214 aa16.13■□□□□ 0.17
FAM3A-215ENST00000447601 SVBPQ8N300 66 aa16.13■□□□□ 0.17
FAM3A-215ENST00000447601 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.13■□□□□ 0.17
FAM3A-215ENST00000447601 KDF1Q8NAX2 398 aaPredicted RBP16.13■□□□□ 0.17
FAM3A-215ENST00000447601 R3HDM4Q96D70 268 aa16.13■□□□□ 0.17
FAM3A-215ENST00000447601 COQ3Q9NZJ6 369 aa16.13■□□□□ 0.17
FAM3A-215ENST00000447601 CARHSP1Q9Y2V2 147 aaKnown RBP16.13■□□□□ 0.17
FAM3A-215ENST00000447601 FAM96BQ9Y3D0 163 aa16.13■□□□□ 0.17
FAM3A-215ENST00000447601 PPIAL4EA0A075B759 164 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.12■□□□□ 0.17
FAM3A-215ENST00000447601 PPIAL4DF5H284 164 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 CD5P06127 495 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 PPIAL4FP0DN26 164 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 ADCYAP1P18509 176 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 APOBEC3AP31941 199 aaPredicted RBP16.12■□□□□ 0.17
FAM3A-215ENST00000447601 SNCAP37840 140 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 LINC00205P59089 165 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 EFNB3Q15768 340 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 RPL39P5Q59GN2 51 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 SEC11CQ9BY50 192 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 TMEM106BQ9NUM4 274 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 PPIAL4AQ9Y536 164 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 LINC00312Q9Y6C7 94 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 FAM90A9PA6NNJ1 464 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 IGHV3-7P01780 117 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 NDUFB7P17568 137 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 MEF2CQ06413 473 aaPredicted RBP16.12■□□□□ 0.17
FAM3A-215ENST00000447601 CT45A1Q5HYN5 189 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 LFNGQ8NES3 379 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 CT45A3Q8NHU0 189 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 CIB3Q96Q77 187 aaPredicted RBP16.12■□□□□ 0.17
FAM3A-215ENST00000447601 S1PR3Q99500 378 aa16.12■□□□□ 0.17
FAM3A-215ENST00000447601 SLC25A10Q9UBX3 287 aaPredicted RBP16.12■□□□□ 0.17
FAM3A-215ENST00000447601 SLC31A2O15432 143 aa16.11■□□□□ 0.17
FAM3A-215ENST00000447601 RBMXL2O75526 392 aaKnown RBP16.11■□□□□ 0.17
FAM3A-215ENST00000447601 ARHGDIBP52566 201 aa16.11■□□□□ 0.17
FAM3A-215ENST00000447601 TMEM14EPQ6UXP3 125 aa16.11■□□□□ 0.17
FAM3A-215ENST00000447601 LILRB2Q8N423 598 aa16.11■□□□□ 0.17
FAM3A-215ENST00000447601 ZNF525Q8N782 197 aa16.11■□□□□ 0.17
FAM3A-215ENST00000447601 SCGB1C1Q8TD33 95 aa16.11■□□□□ 0.17
FAM3A-215ENST00000447601 CCL17Q92583 94 aa16.11■□□□□ 0.17
FAM3A-215ENST00000447601 LEAP2Q969E1 77 aa16.11■□□□□ 0.17
FAM3A-215ENST00000447601 NKX6-2Q9C056 277 aaPredicted RBP16.11■□□□□ 0.17
FAM3A-215ENST00000447601 B9A039 149 aa16.1■□□□□ 0.17
FAM3A-215ENST00000447601 NFYBP25208 207 aa16.1■□□□□ 0.17
FAM3A-215ENST00000447601 ERVK-16P61578 105 aa16.1■□□□□ 0.17
FAM3A-215ENST00000447601 RUNX1Q01196 453 aa16.1■□□□□ 0.17
FAM3A-215ENST00000447601 AKR1C8PQ5T2L2 129 aa16.1■□□□□ 0.17
FAM3A-215ENST00000447601 ATRAIDQ6UW56 229 aa16.1■□□□□ 0.17
FAM3A-215ENST00000447601 DTD1Q8TEA8 209 aa16.1■□□□□ 0.17
FAM3A-215ENST00000447601 NEUROG1Q92886 237 aa16.1■□□□□ 0.17
FAM3A-215ENST00000447601 GAL3ST2Q9H3Q3 398 aa16.1■□□□□ 0.17
FAM3A-215ENST00000447601 RPUSD1Q9UJJ7 312 aaKnown RBP16.1■□□□□ 0.17
FAM3A-215ENST00000447601 ARL16Q0P5N6 197 aa16.1■□□□□ 0.17
FAM3A-215ENST00000447601 DPPA3Q6W0C5 159 aa16.1■□□□□ 0.17
FAM3A-215ENST00000447601 HAPLN4Q86UW8 402 aa16.1■□□□□ 0.17
FAM3A-215ENST00000447601 ZNF439Q8NDP4 499 aa16.1■□□□□ 0.17
FAM3A-215ENST00000447601 OR10A7Q8NGE5 316 aa16.1■□□□□ 0.17
FAM3A-215ENST00000447601 PARD6GQ9BYG4 376 aaPredicted RBP16.1■□□□□ 0.17
FAM3A-215ENST00000447601 PLCE1Q9P212 2302 aa16.09■□□□□ 0.17
FAM3A-215ENST00000447601 TLN1Q9Y490 2541 aaKnown RBP16.09■□□□□ 0.17
FAM3A-215ENST00000447601 SAA2-SAA4A0A096LPE2 208 aa16.09■□□□□ 0.17
FAM3A-215ENST00000447601 LY86O95711 162 aa16.09■□□□□ 0.17
FAM3A-215ENST00000447601 SFTA3P0C7M3 94 aa16.09■□□□□ 0.17
FAM3A-215ENST00000447601 OR8U8P0C7N1 319 aa16.09■□□□□ 0.17
FAM3A-215ENST00000447601 SAA2P0DJI9 122 aaPredicted RBP16.09■□□□□ 0.17
FAM3A-215ENST00000447601 THBS3P49746 956 aa16.09■□□□□ 0.17
FAM3A-215ENST00000447601 PEA15Q15121 130 aa16.09■□□□□ 0.17
FAM3A-215ENST00000447601 THNSL2Q86YJ6 484 aa16.09■□□□□ 0.17
FAM3A-215ENST00000447601 OR4S2Q8NH73 311 aa16.09■□□□□ 0.17
FAM3A-215ENST00000447601 LINC01560Q8TB33 94 aa16.09■□□□□ 0.17
FAM3A-215ENST00000447601 DDB2Q92466 427 aa16.09■□□□□ 0.17
FAM3A-215ENST00000447601 ADTRPQ96IZ2 230 aa16.09■□□□□ 0.17
FAM3A-215ENST00000447601 PBDC1Q9BVG4 233 aa16.09■□□□□ 0.17
FAM3A-215ENST00000447601 RFNGQ9Y644 331 aa16.09■□□□□ 0.17
FAM3A-215ENST00000447601 NQO2P16083 231 aa16.08■□□□□ 0.17
FAM3A-215ENST00000447601 RPL31P62899 125 aaKnown RBP16.08■□□□□ 0.17
FAM3A-215ENST00000447601 SLC38A11Q08AI6 406 aa16.08■□□□□ 0.17
FAM3A-215ENST00000447601 AARDQ4LEZ3 155 aa16.08■□□□□ 0.17
FAM3A-215ENST00000447601 PRAMEF5Q5TYX0 476 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms