RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 BEX5Q5H9J7 111 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 C1orf100Q5SVJ3 147 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 THEM4Q5T1C6 240 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 OR52W1Q6IF63 320 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 C3orf33Q6P1S2 294 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 DEGS2Q6QHC5 323 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 IDO2Q6ZQW0 420 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 TMED4Q7Z7H5 227 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 TRAPPC6BQ86SZ2 158 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 ZNF546Q86UE3 836 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 COMMD7Q86VX2 200 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 ZNF100Q8IYN0 542 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 CMTM1Q8IZ96 169 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 PUSL1Q8N0Z8 303 aaKnown RBP3.06□□□□□ -1.92
VPS29-202ENST00000447578 SPICQ8N5J4 248 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 ACBD4Q8NC06 268 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 OR1M1Q8NGA1 313 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 OR9G4Q8NGQ1 327 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 OR6X1Q8NH79 312 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 TNFAIP8L1Q8WVP5 186 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 RNF133Q8WVZ7 376 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 GTSF1Q8WW33 167 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 NAT6Q93015 286 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 SEH1LQ96EE3 360 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 ADAT3Q96EY9 351 aaPredicted RBP3.06□□□□□ -1.92
VPS29-202ENST00000447578 HES7Q9BYE0 225 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 CHST6Q9GZX3 395 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 IFT46Q9NQC8 304 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 RAB22AQ9UL26 194 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 FARSAQ9Y285 508 aaKnown RBP3.06□□□□□ -1.92
VPS29-202ENST00000447578 PCNTO95613 3336 aa3.06□□□□□ -1.92
VPS29-202ENST00000447578 SNRNP200O75643 2136 aaKnown RBP3.05□□□□□ -1.92
VPS29-202ENST00000447578 CCDC88CQ9P219 2028 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 FXYD6-FXYD2A0A087WZ82 144 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 IGHV1-45A0A0A0MS14 117 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 IGHV3-15A0A0B4J1V0 119 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 RBMY1BA6NDE4 496 aaKnown RBP3.05□□□□□ -1.92
VPS29-202ENST00000447578 RBMY1EA6NEQ0 496 aaKnown RBP3.05□□□□□ -1.92
VPS29-202ENST00000447578 TMEM235A6NFC5 223 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 C9J4A7 227 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 MCRIP1C9JLW8 97 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 ZNF878C9JN71 531 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 RER1O15258 196 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 YKT6O15498 198 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 TRAF3IP2O43734 574 aaPredicted RBP3.05□□□□□ -1.92
VPS29-202ENST00000447578 CHST1O43916 411 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 SNAPC5O75971 98 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 OR2A4O95047 310 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 CYB5AP00167 134 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 CD74P04233 296 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 CRYGCP07315 174 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 OR4E1P0C645 316 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 RBMY1DP0C7P1 496 aaKnown RBP3.05□□□□□ -1.92
VPS29-202ENST00000447578 RBMY1A1P0DJD3 496 aaKnown RBP3.05□□□□□ -1.92
VPS29-202ENST00000447578 CD37P11049 281 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 LIPCP11150 499 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 SLC2A1P11166 492 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 CCL4P13236 92 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 NFYAP23511 347 aaPredicted RBP3.05□□□□□ -1.92
VPS29-202ENST00000447578 CD34P28906 385 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 ZNF93P35789 620 aaPredicted RBP3.05□□□□□ -1.92
VPS29-202ENST00000447578 EIF1P41567 113 aaKnown RBP3.05□□□□□ -1.92
VPS29-202ENST00000447578 VDAC2P45880 294 aaPredicted RBP3.05□□□□□ -1.92
VPS29-202ENST00000447578 CSNK1A1P48729 337 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 H2BFSP57053 126 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 SGCAQ16586 387 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 PRR30Q53SZ7 412 aaPredicted RBP3.05□□□□□ -1.92
VPS29-202ENST00000447578 RNASE10Q5GAN6 216 aaKnown RBP3.05□□□□□ -1.92
VPS29-202ENST00000447578 CLLU1Q5K131 121 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 STUMQ69YW2 141 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 OPN5Q6U736 354 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 GLIPR1L1Q6UWM5 242 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 TMPPEQ6ZT21 453 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 HDDC2Q7Z4H3 204 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 ABHD12BQ7Z5M8 362 aaPredicted RBP3.05□□□□□ -1.92
VPS29-202ENST00000447578 HSD17B13Q7Z5P4 300 aaPredicted RBP3.05□□□□□ -1.92
VPS29-202ENST00000447578 ANGPTL5Q86XS5 388 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 LYPD6Q86Y78 171 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 ZNF584Q8IVC4 421 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 UBALD2Q8IYN6 164 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 ZNF101Q8IZC7 436 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 SLC22A24Q8N4F4 322 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 C12orf45Q8N5I9 185 aaPredicted RBP3.05□□□□□ -1.92
VPS29-202ENST00000447578 ZNF283Q8N7M2 679 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 KLHL30-AS1Q8NEE0 82 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 OR4S1Q8NGB4 309 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 OR8B12Q8NGG6 310 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 OR5D14Q8NGL3 314 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 OR13C8Q8NGS7 320 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 OR13C9Q8NGT0 318 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 LYPD6BQ8NI32 183 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 ANGPTL6Q8NI99 470 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 ZNF502Q8TBZ5 544 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 LRRC20Q8TCA0 184 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 OR51E1Q8TCB6 317 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 AQP3Q92482 292 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 PTX4Q96A99 478 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 CMBLQ96DG6 245 aa3.05□□□□□ -1.92
VPS29-202ENST00000447578 C1orf147Q96MC9 270 aaPredicted RBP3.05□□□□□ -1.92
VPS29-202ENST00000447578 OR2A7Q96R45 310 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms