RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 ALOX5APP20292 161 aa2.22□□□□□ -2.05
PMS1-215ENST00000447232 ARL3P36405 182 aa2.22□□□□□ -2.05
PMS1-215ENST00000447232 GSSP48637 474 aa2.22□□□□□ -2.05
PMS1-215ENST00000447232 HNRNPA3P51991 378 aaKnown RBP2.22□□□□□ -2.05
PMS1-215ENST00000447232 PJVKQ0ZLH3 352 aa2.22□□□□□ -2.05
PMS1-215ENST00000447232 PTGES3Q15185 160 aaKnown RBP2.22□□□□□ -2.05
PMS1-215ENST00000447232 LAMTOR1Q6IAA8 161 aa2.22□□□□□ -2.05
PMS1-215ENST00000447232 FAM71F2Q6NXP2 309 aa2.22□□□□□ -2.05
PMS1-215ENST00000447232 ELMOD2Q8IZ81 293 aa2.22□□□□□ -2.05
PMS1-215ENST00000447232 OR52L2PQ8NGH6 319 aa2.22□□□□□ -2.05
PMS1-215ENST00000447232 CNIH3Q8TBE1 160 aa2.22□□□□□ -2.05
PMS1-215ENST00000447232 FYTTD1Q96QD9 318 aaKnown RBP2.22□□□□□ -2.05
PMS1-215ENST00000447232 MAGT1Q9H0U3 335 aa2.22□□□□□ -2.05
PMS1-215ENST00000447232 ETV7Q9Y603 341 aa2.22□□□□□ -2.05
PMS1-215ENST00000447232 SAA2-SAA4A0A096LPE2 208 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 PRR32B1ATL7 298 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 H0YJW9 148 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 DYNC1I1O14576 645 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 SELENOFO60613 162 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 GATBO75879 557 aaKnown RBP2.21□□□□□ -2.06
PMS1-215ENST00000447232 CRYGBP07316 175 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 CTSDP07339 412 aaPredicted RBP2.21□□□□□ -2.06
PMS1-215ENST00000447232 SAA2P0DJI9 122 aaPredicted RBP2.21□□□□□ -2.06
PMS1-215ENST00000447232 CT45A6P0DMU7 189 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 CT45A5P0DMU8 189 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 CT45A7P0DMV0 189 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 PSMB6P28072 239 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 ALKBH1Q13686 389 aaKnown RBP2.21□□□□□ -2.06
PMS1-215ENST00000447232 MORN2Q502X0 79 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 LRRC23Q53EV4 343 aaPredicted RBP2.21□□□□□ -2.06
PMS1-215ENST00000447232 METTL21CQ5VZV1 264 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 SSX7Q7RTT5 188 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 TRPT1Q86TN4 253 aaKnown RBP2.21□□□□□ -2.06
PMS1-215ENST00000447232 OR10V1Q8NGI7 309 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 NIPSNAP3BQ9BS92 247 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 UPK3BQ9BT76 320 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 ABHD14AQ9BUJ0 271 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 TAS2R1Q9NYW7 299 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 GNG12Q9UBI6 72 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 EXOSC1Q9Y3B2 195 aaKnown RBP2.21□□□□□ -2.06
PMS1-215ENST00000447232 ENPP4Q9Y6X5 453 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 H3BNX3 289 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 CCDC22O60826 627 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 GMNNO75496 209 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 IGLV2-23P01705 113 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 SEMG1P04279 462 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 SPP1P10451 314 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 HTN3P15516 51 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 MC5RP33032 325 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 MTCP1P56278 107 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 STX3Q13277 289 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 ZNF829Q3KNS6 432 aaPredicted RBP2.21□□□□□ -2.06
PMS1-215ENST00000447232 TMEM69Q5SWH9 247 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 SERPINA12Q8IW75 414 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 SAXO1Q8IYX7 474 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 ZNF114Q8NC26 417 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 OR8D4Q8NGM9 314 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 DAZAP1Q96EP5 407 aaKnown RBP2.21□□□□□ -2.06
PMS1-215ENST00000447232 ZNF436Q9C0F3 470 aaPredicted RBP2.21□□□□□ -2.06
PMS1-215ENST00000447232 MOB1AQ9H8S9 216 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 ZNF586Q9NXT0 402 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 IL20Q9NYY1 176 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 WASHC3Q9Y3C0 194 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 UFC1Q9Y3C8 167 aa2.21□□□□□ -2.06
PMS1-215ENST00000447232 TEX48A0A1B0GUV7 120 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 TMEM30CPA0ZSE6 113 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 TMEM189A5PLL7 270 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 SNX3O60493 162 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 SNNO75324 88 aaPredicted RBP2.2□□□□□ -2.06
PMS1-215ENST00000447232 ZNF254O75437 659 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 OR2J3O76001 311 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 IGKV1-16P04430 117 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 REG1AP05451 166 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 APELAP0DMC3 54 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 STX1BP61266 288 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 HTD2P86397 168 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 TSPAN31Q12999 210 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 RIPK1Q13546 671 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 IFI44LQ53G44 452 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 LY6G6FQ5SQ64 297 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 SLC25A30Q5SVS4 291 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 PXDC1Q5TGL8 231 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 ELP2Q6IA86 826 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 ERICH5Q6P6B1 374 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 CLEC19AQ6UXS0 136 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 GLDNQ6ZMI3 551 aaPredicted RBP2.2□□□□□ -2.06
PMS1-215ENST00000447232 UBLCP1Q8WVY7 318 aaPredicted RBP2.2□□□□□ -2.06
PMS1-215ENST00000447232 TMEM190Q8WZ59 177 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 TSNAXQ99598 290 aaKnown RBP2.2□□□□□ -2.06
PMS1-215ENST00000447232 IFI27L2Q9H2X8 130 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 CLEC5AQ9NY25 188 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 ZNF581Q9P0T4 197 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 SNX5Q9Y5X3 404 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 HBZP02008 142 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 MT-ND4P03905 459 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 KRTAP10-7P60409 375 aaPredicted RBP2.2□□□□□ -2.06
PMS1-215ENST00000447232 SF3A3Q12874 501 aaKnown RBP eCLIP2.2□□□□□ -2.062e-6■■■■□ 23.8
PMS1-215ENST00000447232 IL13RA2Q14627 380 aa2.2□□□□□ -2.06
PMS1-215ENST00000447232 GNMTQ14749 295 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms