RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 LINC00469Q8N7U9 141 aa18.18■□□□□ 0.5
SKIDA1-201ENST00000444772 OR4X1Q8NH49 305 aa18.18■□□□□ 0.5
SKIDA1-201ENST00000444772 RPUSD4Q96CM3 377 aaKnown RBP18.18■□□□□ 0.5
SKIDA1-201ENST00000444772 DMDP11532 3685 aa18.18■□□□□ 0.5
SKIDA1-201ENST00000444772 SMCO3A2RU48 225 aa18.17■□□□□ 0.5
SKIDA1-201ENST00000444772 ZG16O60844 167 aa18.17■□□□□ 0.5
SKIDA1-201ENST00000444772 MDKP21741 143 aaPredicted RBP18.17■□□□□ 0.5
SKIDA1-201ENST00000444772 BRWD1-AS2P59051 145 aa18.17■□□□□ 0.5
SKIDA1-201ENST00000444772 C4orf17Q53FE4 359 aa18.17■□□□□ 0.5
SKIDA1-201ENST00000444772 PDZD11Q5EBL8 140 aa18.17■□□□□ 0.5
SKIDA1-201ENST00000444772 TRAT1Q6PIZ9 186 aa18.17■□□□□ 0.5
SKIDA1-201ENST00000444772 WASF3Q9UPY6 502 aa18.17■□□□□ 0.5
SKIDA1-201ENST00000444772 FRYLO94915 3013 aa18.17■□□□□ 0.5
SKIDA1-201ENST00000444772 C11orf53Q8IXP5 236 aa18.17■□□□□ 0.5
SKIDA1-201ENST00000444772 RAB24Q969Q5 203 aa18.17■□□□□ 0.5
SKIDA1-201ENST00000444772 COQ2Q96H96 371 aa18.17■□□□□ 0.5
SKIDA1-201ENST00000444772 SNX22Q96L94 193 aa18.17■□□□□ 0.5
SKIDA1-201ENST00000444772 PACRGQ96M98 296 aaPredicted RBP18.17■□□□□ 0.5
SKIDA1-201ENST00000444772 LNP1A1A4G5 178 aa18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 GALR1P47211 349 aa18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 GABRA2P47869 451 aa18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 ARG2P78540 354 aa18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 DEFA6Q01524 100 aa18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 RNFT1Q5M7Z0 435 aa18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 Q6ZT83 130 aa18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 OR4F5Q8NH21 305 aa18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 NEIL1Q96FI4 390 aaPredicted RBP18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 OR4F4Q96R69 305 aa18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 DIRC2Q96SL1 478 aa18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 PPP5D1E7EU14 171 aa18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 MLNRO43193 412 aa18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 MPV17P39210 176 aa18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 TMEM249Q2WGJ8 235 aa18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 ACOT6Q3I5F7 207 aaPredicted RBP18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 FAM216AQ8WUB2 273 aa18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 HIST1H2BLQ99880 126 aa18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 HRASP01112 189 aa18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 FAM3BP58499 235 aaPredicted RBP18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 PAX5Q02548 391 aa18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 COA6Q5JTJ3 125 aaKnown RBP18.16■□□□□ 0.5
SKIDA1-201ENST00000444772 IGHV3-64DA0A0J9YX35 117 aa18.15■□□□□ 0.5
SKIDA1-201ENST00000444772 LYZL6O75951 148 aa18.15■□□□□ 0.5
SKIDA1-201ENST00000444772 C9orf152Q5JTZ5 239 aa18.15■□□□□ 0.5
SKIDA1-201ENST00000444772 OR5R1Q8NH85 324 aa18.15■□□□□ 0.5
SKIDA1-201ENST00000444772 MRGPRDQ8TDS7 321 aa18.15■□□□□ 0.5
SKIDA1-201ENST00000444772 CLCF1Q9UBD9 225 aa18.15■□□□□ 0.5
SKIDA1-201ENST00000444772 MED13Q9UHV7 2174 aa18.15■□□□□ 0.5
SKIDA1-201ENST00000444772 WNT9BO14905 357 aa18.15■□□□□ 0.5
SKIDA1-201ENST00000444772 RBMXL2O75526 392 aaKnown RBP18.15■□□□□ 0.5
SKIDA1-201ENST00000444772 ADH4P08319 380 aa18.15■□□□□ 0.5
SKIDA1-201ENST00000444772 CD59P13987 128 aa18.15■□□□□ 0.5
SKIDA1-201ENST00000444772 SMIM21Q3B7S5 101 aa18.15■□□□□ 0.5
SKIDA1-201ENST00000444772 KIAA2026Q5HYC2 2103 aa18.15■□□□□ 0.5
SKIDA1-201ENST00000444772 CDPF1Q6NVV7 123 aa18.15■□□□□ 0.5
SKIDA1-201ENST00000444772 FAM214BQ7L5A3 538 aa18.15■□□□□ 0.5
SKIDA1-201ENST00000444772 RNASEH2CQ8TDP1 164 aaKnown RBP18.15■□□□□ 0.5
SKIDA1-201ENST00000444772 FAM90A9PA6NNJ1 464 aa18.14■□□□□ 0.49
SKIDA1-201ENST00000444772 SRP14P37108 136 aaKnown RBP18.14■□□□□ 0.49
SKIDA1-201ENST00000444772 HTD2P86397 168 aa18.14■□□□□ 0.49
SKIDA1-201ENST00000444772 TFF3Q07654 80 aa18.14■□□□□ 0.49
SKIDA1-201ENST00000444772 ZDHHC16Q969W1 377 aa18.14■□□□□ 0.49
SKIDA1-201ENST00000444772 HMGB3O15347 200 aaKnown RBP18.14■□□□□ 0.49
SKIDA1-201ENST00000444772 IGKV3-15P01624 115 aa18.14■□□□□ 0.49
SKIDA1-201ENST00000444772 HOXC12P31275 282 aa18.14■□□□□ 0.49
SKIDA1-201ENST00000444772 PKIAP61925 76 aa18.14■□□□□ 0.49
SKIDA1-201ENST00000444772 AARDQ4LEZ3 155 aa18.14■□□□□ 0.49
SKIDA1-201ENST00000444772 WDR82Q6UXN9 313 aa18.14■□□□□ 0.49
SKIDA1-201ENST00000444772 ACY3Q96HD9 319 aa18.14■□□□□ 0.49
SKIDA1-201ENST00000444772 GAB2Q9UQC2 676 aa18.14■□□□□ 0.49
SKIDA1-201ENST00000444772 MARCH11A6NNE9 402 aa18.13■□□□□ 0.49
SKIDA1-201ENST00000444772 DVL1O14640 695 aa18.13■□□□□ 0.49
SKIDA1-201ENST00000444772 SPINT2O43291 252 aa18.13■□□□□ 0.49
SKIDA1-201ENST00000444772 RD3LP0DJH9 198 aa18.13■□□□□ 0.49
SKIDA1-201ENST00000444772 KITLGP21583 273 aa18.13■□□□□ 0.49
SKIDA1-201ENST00000444772 BTNL3Q6UXE8 466 aa18.13■□□□□ 0.49
SKIDA1-201ENST00000444772 ZNF826PQ6ZT77 177 aa18.13■□□□□ 0.49
SKIDA1-201ENST00000444772 C1orf162Q8NEQ5 155 aaPredicted RBP18.13■□□□□ 0.49
SKIDA1-201ENST00000444772 CDC34P49427 236 aaPredicted RBP18.13■□□□□ 0.49
SKIDA1-201ENST00000444772 RPP30P78346 268 aaKnown RBP18.13■□□□□ 0.49
SKIDA1-201ENST00000444772 HNF4GQ14541 408 aa18.13■□□□□ 0.49
SKIDA1-201ENST00000444772 RAB1CQ92928 201 aa18.13■□□□□ 0.49
SKIDA1-201ENST00000444772 FREM2Q5SZK8 3169 aa18.13■□□□□ 0.49
SKIDA1-201ENST00000444772 PDE6DO43924 150 aa18.12■□□□□ 0.49
SKIDA1-201ENST00000444772 PAGE4O60829 102 aa18.12■□□□□ 0.49
SKIDA1-201ENST00000444772 WISP2O76076 250 aa18.12■□□□□ 0.49
SKIDA1-201ENST00000444772 CXorf67Q86X51 503 aaPredicted RBP18.12■□□□□ 0.49
SKIDA1-201ENST00000444772 OR1P1Q8NH06 330 aa18.12■□□□□ 0.49
SKIDA1-201ENST00000444772 S100PBPQ96BU1 408 aa18.12■□□□□ 0.49
SKIDA1-201ENST00000444772 WDR83OSQ9Y284 106 aa18.12■□□□□ 0.49
SKIDA1-201ENST00000444772 MPDU1O75352 247 aa18.12■□□□□ 0.49
SKIDA1-201ENST00000444772 IFNA10P01566 189 aa18.12■□□□□ 0.49
SKIDA1-201ENST00000444772 GYPAP02724 150 aa18.12■□□□□ 0.49
SKIDA1-201ENST00000444772 SOX8P57073 446 aa18.12■□□□□ 0.49
SKIDA1-201ENST00000444772 COL10A1Q03692 680 aa18.12■□□□□ 0.49
SKIDA1-201ENST00000444772 BTF3L4Q96K17 158 aa18.12■□□□□ 0.49
SKIDA1-201ENST00000444772 BDP1A6H8Y1 2624 aa18.12■□□□□ 0.49
SKIDA1-201ENST00000444772 LINC00473A8K010 186 aa18.11■□□□□ 0.49
SKIDA1-201ENST00000444772 TSTD3H0UI37 97 aa18.11■□□□□ 0.49
SKIDA1-201ENST00000444772 GGCTO75223 188 aaKnown RBP18.11■□□□□ 0.49
SKIDA1-201ENST00000444772 TYMSP04818 313 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms