RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 MMP24Q9Y5R2 645 aa11.28□□□□□ -0.6
SSBP3-208ENST00000444533 H0YJW9 148 aa11.27□□□□□ -0.61
SSBP3-208ENST00000444533 CT45A6P0DMU7 189 aa11.27□□□□□ -0.61
SSBP3-208ENST00000444533 CT45A5P0DMU8 189 aa11.27□□□□□ -0.61
SSBP3-208ENST00000444533 CT45A7P0DMV0 189 aa11.27□□□□□ -0.61
SSBP3-208ENST00000444533 INPP1P49441 399 aa11.27□□□□□ -0.61
SSBP3-208ENST00000444533 COMPP49747 757 aaPredicted RBP11.27□□□□□ -0.61
SSBP3-208ENST00000444533 DGCR2P98153 550 aa11.27□□□□□ -0.61
SSBP3-208ENST00000444533 CATR1Q13166 79 aa11.27□□□□□ -0.61
SSBP3-208ENST00000444533 MEF2DQ14814 521 aa11.27□□□□□ -0.61
SSBP3-208ENST00000444533 MSMO1Q15800 293 aa11.27□□□□□ -0.61
SSBP3-208ENST00000444533 ABCA11PQ4W5N1 156 aa11.27□□□□□ -0.61
SSBP3-208ENST00000444533 Q6ZSV7 163 aa11.27□□□□□ -0.61
SSBP3-208ENST00000444533 LYSMD2Q8IV50 215 aa11.27□□□□□ -0.61
SSBP3-208ENST00000444533 TMEM229BQ8NBD8 167 aa11.27□□□□□ -0.61
SSBP3-208ENST00000444533 OR5AN1Q8NGI8 311 aa11.27□□□□□ -0.61
SSBP3-208ENST00000444533 FLYWCH2Q96CP2 140 aaKnown RBP11.27□□□□□ -0.61
SSBP3-208ENST00000444533 TSNAXQ99598 290 aaKnown RBP11.27□□□□□ -0.61
SSBP3-208ENST00000444533 GSTZ1O43708 216 aaPredicted RBP11.26□□□□□ -0.61
SSBP3-208ENST00000444533 RAB3DO95716 219 aa11.26□□□□□ -0.61
SSBP3-208ENST00000444533 MDKP21741 143 aaPredicted RBP11.26□□□□□ -0.61
SSBP3-208ENST00000444533 FAUP35544 74 aaKnown RBP11.26□□□□□ -0.61
SSBP3-208ENST00000444533 VDAC2P45880 294 aaPredicted RBP11.26□□□□□ -0.61
SSBP3-208ENST00000444533 RPS16P62249 146 aaKnown RBP11.26□□□□□ -0.61
SSBP3-208ENST00000444533 VAX1Q5SQQ9 334 aa11.26□□□□□ -0.61
SSBP3-208ENST00000444533 STEAP1BQ6NZ63 245 aa11.26□□□□□ -0.61
SSBP3-208ENST00000444533 GLDNQ6ZMI3 551 aaPredicted RBP11.26□□□□□ -0.61
SSBP3-208ENST00000444533 ZNF66Q6ZN08 573 aa11.26□□□□□ -0.61
SSBP3-208ENST00000444533 KCTD9Q7L273 389 aa11.26□□□□□ -0.61
SSBP3-208ENST00000444533 ARRDC1Q8N5I2 433 aa11.26□□□□□ -0.61
SSBP3-208ENST00000444533 POC5Q8NA72 575 aa11.26□□□□□ -0.61
SSBP3-208ENST00000444533 SPATA3Q8NHX4 192 aa11.26□□□□□ -0.61
SSBP3-208ENST00000444533 TCTEX1D2Q8WW35 142 aa11.26□□□□□ -0.61
SSBP3-208ENST00000444533 RBMX2Q9Y388 322 aaKnown RBP11.26□□□□□ -0.61
SSBP3-208ENST00000444533 IGKV1D-13A0A0B4J2D9 117 aa11.25□□□□□ -0.61
SSBP3-208ENST00000444533 DISC1C4P0D8 188 aa11.25□□□□□ -0.61
SSBP3-208ENST00000444533 M0QYG6 137 aa11.25□□□□□ -0.61
SSBP3-208ENST00000444533 NBR2O15453 112 aa11.25□□□□□ -0.61
SSBP3-208ENST00000444533 CD3DP04234 171 aa11.25□□□□□ -0.61
SSBP3-208ENST00000444533 AKAIN1P0CW23 69 aa11.25□□□□□ -0.61
SSBP3-208ENST00000444533 IGKV1-13P0DP09 117 aa11.25□□□□□ -0.61
SSBP3-208ENST00000444533 KIR2DS2P43631 304 aa11.25□□□□□ -0.61
SSBP3-208ENST00000444533 RELBQ01201 579 aa11.25□□□□□ -0.61
SSBP3-208ENST00000444533 FOXB2Q5VYV0 432 aa11.25□□□□□ -0.61
SSBP3-208ENST00000444533 Q8N402 240 aa11.25□□□□□ -0.61
SSBP3-208ENST00000444533 C5orf56Q8N8D9 126 aa11.25□□□□□ -0.61
SSBP3-208ENST00000444533 OR6Q1Q8NGQ2 317 aa11.25□□□□□ -0.61
SSBP3-208ENST00000444533 LINC01006Q8NI28 216 aa11.25□□□□□ -0.61
SSBP3-208ENST00000444533 MOB3AQ96BX8 217 aa11.25□□□□□ -0.61
SSBP3-208ENST00000444533 THAP7Q9BT49 309 aaPredicted RBP11.25□□□□□ -0.61
SSBP3-208ENST00000444533 LIN7CQ9NUP9 197 aaKnown RBP11.25□□□□□ -0.61
SSBP3-208ENST00000444533 A6NHS1 94 aa11.24□□□□□ -0.61
SSBP3-208ENST00000444533 SHOXO15266 292 aa11.24□□□□□ -0.61
SSBP3-208ENST00000444533 KCNAB3O43448 404 aa11.24□□□□□ -0.61
SSBP3-208ENST00000444533 PGAM2P15259 253 aa11.24□□□□□ -0.61
SSBP3-208ENST00000444533 DUTP33316 252 aaKnown RBP11.24□□□□□ -0.61
SSBP3-208ENST00000444533 ECI1P42126 302 aa11.24□□□□□ -0.61
SSBP3-208ENST00000444533 LGALS7P47929 136 aa11.24□□□□□ -0.61
SSBP3-208ENST00000444533 BLCAPP62952 87 aa11.24□□□□□ -0.61
SSBP3-208ENST00000444533 SCGB2B2Q4G0G5 96 aa11.24□□□□□ -0.61
SSBP3-208ENST00000444533 CCDC190Q86UF4 302 aa11.24□□□□□ -0.61
SSBP3-208ENST00000444533 FOXRED2Q8IWF2 684 aa11.24□□□□□ -0.61
SSBP3-208ENST00000444533 Q8N6K4 173 aa11.24□□□□□ -0.61
SSBP3-208ENST00000444533 ZNF383Q8NA42 475 aa11.24□□□□□ -0.61
SSBP3-208ENST00000444533 AIFM2Q9BRQ8 373 aa11.24□□□□□ -0.61
SSBP3-208ENST00000444533 CCL28Q9NRJ3 127 aa11.24□□□□□ -0.61
SSBP3-208ENST00000444533 GPR31O00270 319 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 FCGR3BO75015 233 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 SPDEFO95238 335 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 AMY2AP04746 511 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 ETV6P41212 452 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 ZNF45Q02386 682 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 AADACL3Q5VUY0 350 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 TRIQKQ629K1 86 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 SLC35E3Q7Z769 313 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 SLC38A6Q8IZM9 456 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 Q8N2B8 174 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 TOMM5Q8N4H5 51 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 BVESQ8NE79 360 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 OR4S2Q8NH73 311 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 CD300LFQ8TDQ1 290 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 TAF15Q92804 592 aaKnown RBP eCLIP11.23□□□□□ -0.61
SSBP3-208ENST00000444533 HARBI1Q96MB7 349 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 SOSTQ9BQB4 213 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 GON7Q9BXV9 100 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 ZNF702PQ9H963 129 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 SCP2D1Q9UJQ7 156 aa11.23□□□□□ -0.61
SSBP3-208ENST00000444533 RRHO14718 337 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 TNFSF12O43508 249 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 CREBL2O60519 120 aaPredicted RBP11.22□□□□□ -0.61
SSBP3-208ENST00000444533 PROP1O75360 226 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 CRYZL1O95825 349 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 CD74P04233 296 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 VSIG10L2P0DP72 767 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 F2RL1P55085 397 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 CNPY1Q3B7I2 92 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 VMA21Q3ZAQ7 101 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 LIN54Q6MZP7 749 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 SHISA2Q6UWI4 295 aa11.22□□□□□ -0.61
SSBP3-208ENST00000444533 CENPVQ7Z7K6 275 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms