RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 CCL1P22362 96 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 MALLQ13021 153 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 SNAI3Q3KNW1 292 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 NABP1Q96AH0 204 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 ULBP2Q9BZM5 246 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 ZNF586Q9NXT0 402 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 BET1LQ9NYM9 111 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 PCSK5Q92824 1860 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 C11orf94C9JXX5 98 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 CXCL13O43927 109 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 NDUFB4O95168 129 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 SERPINE2P07093 398 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 SCTP09683 121 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 FRMD6-AS1P0C7T7 363 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 IGLC2P0DOY2 106 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 IGLC3P0DOY3 106 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 NPPCP23582 126 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 AMTP48728 403 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 SERF2P84101 59 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 ZNF90Q03938 601 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 SPINK14Q6IE38 97 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 Q6ZRM9 215 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 ZNF295-AS1Q8N0V1 137 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 ZNF114Q8NC26 417 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 CT55Q8WUE5 264 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 PP6455Q8WZ26 134 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 NEIL1Q96FI4 390 aaPredicted RBP12.84□□□□□ -0.35
CHFR-204ENST00000443047 IGKV1-27A0A075B6S5 117 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 TRAV39A0A0B4J263 110 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 DHHO43323 396 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 WNT2P09544 360 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 ZNF16P17020 682 aaPredicted RBP12.84□□□□□ -0.35
CHFR-204ENST00000443047 LRRC75BQ2VPJ9 315 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 LINC01551Q86U37 167 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 C1orf174Q8IYL3 243 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 MRGPRDQ8TDS7 321 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 MRPL18Q9H0U6 180 aaKnown RBP12.84□□□□□ -0.35
CHFR-204ENST00000443047 SH2D2AQ9NP31 389 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 ELOVL5Q9NYP7 299 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 CACNG5Q9UF02 275 aa12.84□□□□□ -0.35
CHFR-204ENST00000443047 FCN1O00602 326 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 NAPSAO96009 420 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 KITLGP21583 273 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 RPL19P84098 196 aaKnown RBP12.83□□□□□ -0.36
CHFR-204ENST00000443047 SLC23A3Q6PIS1 610 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 GCNT2Q8N0V5 402 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 Q8NFD4 153 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 OR10G9Q8NGN4 311 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 OR10G7Q8NGN6 311 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 PINX1Q96BK5 328 aaKnown RBP12.83□□□□□ -0.36
CHFR-204ENST00000443047 BORCS8Q96FH0 119 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 RNF2Q99496 336 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 HES7Q9BYE0 225 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 WDR61Q9GZS3 305 aaKnown RBP12.83□□□□□ -0.36
CHFR-204ENST00000443047 TBL2Q9Y4P3 447 aaKnown RBP12.83□□□□□ -0.36
CHFR-204ENST00000443047 SPENQ96T58 3664 aaKnown RBP12.83□□□□□ -0.36
CHFR-204ENST00000443047 B4GALT1P15291 398 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 HBG1P69891 147 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 HBG2P69892 147 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 PRDX4Q13162 271 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 KIAA1644Q3SXP7 199 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 DCAF12Q5T6F0 453 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 ACSM6Q6P461 480 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 HAPLN4Q86UW8 402 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 OSR2Q8N2R0 312 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 ZNF596Q8TC21 504 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 CACNA1HO95180 2353 aa12.83□□□□□ -0.36
CHFR-204ENST00000443047 CBR3O75828 277 aa12.82□□□□□ -0.36
CHFR-204ENST00000443047 P04436 131 aa12.82□□□□□ -0.36
CHFR-204ENST00000443047 IER3P46695 156 aa12.82□□□□□ -0.36
CHFR-204ENST00000443047 LHX2P50458 406 aa12.82□□□□□ -0.36
CHFR-204ENST00000443047 PEAR1Q5VY43 1037 aaPredicted RBP12.82□□□□□ -0.36
CHFR-204ENST00000443047 TAF15Q92804 592 aaKnown RBP eCLIP12.82□□□□□ -0.36
CHFR-204ENST00000443047 NUDT11Q96G61 164 aa12.82□□□□□ -0.36
CHFR-204ENST00000443047 IGHV2OR16-5A0A0B4J2B6 119 aa12.82□□□□□ -0.36
CHFR-204ENST00000443047 IGKV1-12A0A0C4DH73 117 aa12.82□□□□□ -0.36
CHFR-204ENST00000443047 SYNGR2O43760 224 aa12.82□□□□□ -0.36
CHFR-204ENST00000443047 IGKV1D-12P01611 117 aa12.82□□□□□ -0.36
CHFR-204ENST00000443047 B3GALT5-AS1P59052 145 aa12.82□□□□□ -0.36
CHFR-204ENST00000443047 GRB2P62993 217 aaKnown RBP12.82□□□□□ -0.36
CHFR-204ENST00000443047 SRYQ05066 204 aa12.82□□□□□ -0.36
CHFR-204ENST00000443047 C9orf135Q5VTT2 229 aa12.82□□□□□ -0.36
CHFR-204ENST00000443047 SGCZQ96LD1 299 aa12.82□□□□□ -0.36
CHFR-204ENST00000443047 RAB40CQ96S21 281 aa12.82□□□□□ -0.36
CHFR-204ENST00000443047 PSMG3Q9BT73 122 aaPredicted RBP12.82□□□□□ -0.36
CHFR-204ENST00000443047 RBFOX2O43251 390 aaKnown RBP eCLIP12.81□□□□□ -0.361e-11■■■□□ 15.8
CHFR-204ENST00000443047 PSG2P11465 335 aa12.81□□□□□ -0.36
CHFR-204ENST00000443047 CLDN15P56746 228 aa12.81□□□□□ -0.36
CHFR-204ENST00000443047 ARF1P84077 181 aaKnown RBP12.81□□□□□ -0.36
CHFR-204ENST00000443047 GJC3Q8NFK1 279 aa12.81□□□□□ -0.36
CHFR-204ENST00000443047 FGFBP3Q8TAT2 258 aa12.81□□□□□ -0.36
CHFR-204ENST00000443047 TMEM54Q969K7 222 aa12.81□□□□□ -0.36
CHFR-204ENST00000443047 BOD1L1Q8NFC6 3051 aa12.81□□□□□ -0.36
CHFR-204ENST00000443047 MDFIC2A0A1B0GVS7 189 aa12.81□□□□□ -0.36
CHFR-204ENST00000443047 A0A1W2PNU3 283 aaPredicted RBP12.81□□□□□ -0.36
CHFR-204ENST00000443047 CD300LBA8K4G0 201 aa12.81□□□□□ -0.36
CHFR-204ENST00000443047 TMEM238C9JI98 176 aa12.81□□□□□ -0.36
CHFR-204ENST00000443047 M0R135 149 aa12.81□□□□□ -0.36
CHFR-204ENST00000443047 SLC17A3O00476 420 aa12.81□□□□□ -0.36
CHFR-204ENST00000443047 NTF3P20783 257 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms