RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 DUTP33316 252 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 RCVRNP35243 200 aa11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 CBX3Q13185 183 aa11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 DYRK1AQ13627 763 aa11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 C5orf64Q2M2E5 130 aa11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 DHRS11Q6UWP2 260 aa11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 SNX29P2Q8IUI4 249 aa11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 LAX1Q8IWV1 398 aa11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 ZBTB34Q8NCN2 500 aa11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 OR5AU1Q8NGC0 362 aa11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 DDB2Q92466 427 aa11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 FLYWCH2Q96CP2 140 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 TSNAXQ99598 290 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 GON7Q9BXV9 100 aa11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 SLIRPQ9GZT3 109 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 NXF2Q9GZY0 626 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 RSL24D1Q9UHA3 163 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 RBMX2Q9Y388 322 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 DNHD1Q96M86 4753 aa11.88□□□□□ -0.51
CSNK1E-210ENST00000442216 CCDC160A6NGH7 325 aa11.88□□□□□ -0.51
CSNK1E-210ENST00000442216 RRHO14718 337 aa11.88□□□□□ -0.51
CSNK1E-210ENST00000442216 IGLV2-14P01704 120 aa11.88□□□□□ -0.51
CSNK1E-210ENST00000442216 AADACP22760 399 aa11.88□□□□□ -0.51
CSNK1E-210ENST00000442216 CNTFRP26992 372 aa11.88□□□□□ -0.51
CSNK1E-210ENST00000442216 LGALS7P47929 136 aa11.88□□□□□ -0.51
CSNK1E-210ENST00000442216 MRPS10P82664 201 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-210ENST00000442216 RTL8BQ17RB0 113 aa11.88□□□□□ -0.51
CSNK1E-210ENST00000442216 LIN54Q6MZP7 749 aa11.88□□□□□ -0.51
CSNK1E-210ENST00000442216 LYSMD2Q8IV50 215 aa11.88□□□□□ -0.51
CSNK1E-210ENST00000442216 STPG2Q8N412 459 aa11.88□□□□□ -0.51
CSNK1E-210ENST00000442216 OR5H2Q8NGV7 314 aa11.88□□□□□ -0.51
CSNK1E-210ENST00000442216 BORCS5Q969J3 196 aa11.88□□□□□ -0.51
CSNK1E-210ENST00000442216 HSD17B10Q99714 261 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-210ENST00000442216 EHFQ9NZC4 300 aa11.88□□□□□ -0.51
CSNK1E-210ENST00000442216 ZNF107Q9UII5 783 aaPredicted RBP11.88□□□□□ -0.51
CSNK1E-210ENST00000442216 PLXNB1O43157 2135 aa11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 PSMB11A5LHX3 300 aa11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 J3QRK9 145 aa11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 IGKV1-16P04430 117 aa11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 IGF1P05019 195 aa11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 FCER2P06734 321 aa11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 LINC00205P59089 165 aa11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 RPS16P62249 146 aaKnown RBP11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 SLC35B1P78383 322 aa11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 CD83Q01151 205 aa11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 SSBP1Q04837 148 aaKnown RBP11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 C2orf68Q2NKX9 166 aa11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 TMEM177Q53S58 311 aa11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 ACTBL2Q562R1 376 aa11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 ZNF660Q6AZW8 331 aaPredicted RBP11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 ZNF66Q6ZN08 573 aa11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 COMMD1Q8N668 190 aa11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 OR4X2Q8NGF9 303 aa11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 RBMXL1Q96E39 390 aaKnown RBP11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 ABHD1Q96SE0 405 aa11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 PRELID3BQ9Y3B1 194 aa11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 A3GALT2U3KPV4 340 aa11.87□□□□□ -0.51
CSNK1E-210ENST00000442216 ANK2Q01484 3957 aa11.86□□□□□ -0.51
CSNK1E-210ENST00000442216 LINC00473A8K010 186 aa11.86□□□□□ -0.51
CSNK1E-210ENST00000442216 PMP2P02689 132 aa11.86□□□□□ -0.51
CSNK1E-210ENST00000442216 CD28P10747 220 aa11.86□□□□□ -0.51
CSNK1E-210ENST00000442216 HRH1P35367 487 aa11.86□□□□□ -0.51
CSNK1E-210ENST00000442216 RFX2P48378 723 aa11.86□□□□□ -0.51
CSNK1E-210ENST00000442216 EIF4EBP1Q13541 118 aaPredicted RBP11.86□□□□□ -0.51
CSNK1E-210ENST00000442216 PSG5Q15238 335 aa11.86□□□□□ -0.51
CSNK1E-210ENST00000442216 PYHIN1Q6K0P9 492 aa11.86□□□□□ -0.51
CSNK1E-210ENST00000442216 NDUFA11Q86Y39 141 aa11.86□□□□□ -0.51
CSNK1E-210ENST00000442216 BVESQ8NE79 360 aa11.86□□□□□ -0.51
CSNK1E-210ENST00000442216 MCFD2Q8NI22 146 aa11.86□□□□□ -0.51
CSNK1E-210ENST00000442216 SECTM1Q8WVN6 248 aa11.86□□□□□ -0.51
CSNK1E-210ENST00000442216 DIRAS2Q96HU8 199 aa11.86□□□□□ -0.51
CSNK1E-210ENST00000442216 HSPB9Q9BQS6 159 aa11.86□□□□□ -0.51
CSNK1E-210ENST00000442216 C6orf62Q9GZU0 229 aaPredicted RBP11.86□□□□□ -0.51
CSNK1E-210ENST00000442216 NDUFA13Q9P0J0 144 aa11.86□□□□□ -0.51
CSNK1E-210ENST00000442216 MTFP1Q9UDX5 166 aa11.86□□□□□ -0.51
CSNK1E-210ENST00000442216 IGHV7-81A0A0B4J1V7 117 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 LINC01548A6NM66 108 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 GABARAPH6UMI1 98 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 CTDSPLO15194 276 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 OPN1MWP04001 364 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 OPN1MW2P0DN77 364 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 OPN1MW3P0DN78 364 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 TBPP20226 339 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 HLA-DMAP28067 261 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 HERV-K104P61576 105 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 PLGLAQ15195 96 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 KCTD9Q7L273 389 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 C11orf44Q8N8P7 122 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 OR6F1Q8NGZ6 308 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 OR52I2Q8NH67 350 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 OSR1Q8TAX0 266 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 FCAMRQ8WWV6 532 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 MOB3AQ96BX8 217 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 HARBI1Q96MB7 349 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 NOL4LQ96MY1 436 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 ZNF2Q9BSG1 426 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 SLC5A7Q9GZV3 580 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 MMP27Q9H306 513 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 OR51J1Q9H342 316 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 FBXL15Q9H469 300 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms