RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 FGF17O60258 216 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 FGF1P05230 155 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 BTG1P62324 171 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 TFF2Q03403 129 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 TDRG1Q3Y452 100 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 ALG10BQ5I7T1 473 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 TMEM244Q5VVB8 128 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 SLC18B1Q6NT16 456 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 UNQ5815/PRO19632Q6UWF5 114 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 PRADC1Q9BSG0 188 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 PLEKHB1Q9UF11 243 aaPredicted RBP8.76□□□□□ -1.01
SYNE2-206ENST00000441438 POLR1DQ9Y2S0 133 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 FAM183AA6NL82 134 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 EEF1E1-BLOC1S5C9J1V9 151 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 CCDC179H3BU77 68 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 EEF1E1O43324 174 aaKnown RBP8.76□□□□□ -1.01
SYNE2-206ENST00000441438 TOXO94900 526 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 OR4A8P0C604 315 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 GLIPR1P48060 266 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 OR12D2P58182 307 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 TNFAIP8L2Q6P589 184 aaPredicted RBP8.76□□□□□ -1.01
SYNE2-206ENST00000441438 TMEM219Q86XT9 240 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 C10orf111Q8N326 155 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 OR4F17Q8NGA8 305 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 SLC25A46Q96AG3 418 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 OR4F4Q96R69 305 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 SOSTQ9BQB4 213 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 LSM2Q9Y333 95 aaKnown RBP8.76□□□□□ -1.01
SYNE2-206ENST00000441438 ATG2BQ96BY7 2078 aa8.75□□□□□ -1.01
SYNE2-206ENST00000441438 K7EMT4 169 aa8.75□□□□□ -1.01
SYNE2-206ENST00000441438 HSPB6O14558 160 aa8.75□□□□□ -1.01
SYNE2-206ENST00000441438 PARM1Q6UWI2 310 aa8.75□□□□□ -1.01
SYNE2-206ENST00000441438 TMEM99Q8N816 258 aa8.75□□□□□ -1.01
SYNE2-206ENST00000441438 ZNF442Q9H7R0 627 aa8.75□□□□□ -1.01
SYNE2-206ENST00000441438 ADCYAP1P18509 176 aa8.75□□□□□ -1.01
SYNE2-206ENST00000441438 ZNF84P51523 738 aa8.75□□□□□ -1.01
SYNE2-206ENST00000441438 CRISP3P54108 245 aa8.75□□□□□ -1.01
SYNE2-206ENST00000441438 RPL38P63173 70 aaKnown RBP8.75□□□□□ -1.01
SYNE2-206ENST00000441438 ZNF684Q5T5D7 378 aa8.75□□□□□ -1.01
SYNE2-206ENST00000441438 RNF175Q8N4F7 328 aa8.75□□□□□ -1.01
SYNE2-206ENST00000441438 KLHDC1Q8N7A1 406 aa8.75□□□□□ -1.01
SYNE2-206ENST00000441438 LRTM2Q8N967 370 aa8.75□□□□□ -1.01
SYNE2-206ENST00000441438 TMEM229BQ8NBD8 167 aa8.75□□□□□ -1.01
SYNE2-206ENST00000441438 DERL3Q96Q80 235 aa8.75□□□□□ -1.01
SYNE2-206ENST00000441438 SEC11CQ9BY50 192 aa8.75□□□□□ -1.01
SYNE2-206ENST00000441438 RBKSQ9H477 322 aa8.75□□□□□ -1.01
SYNE2-206ENST00000441438 TBL1XO60907 577 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 OR2H2O95918 312 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 EDNRAP25101 427 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 RFLNAQ6ZTI6 216 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 ZFP41Q8N8Y5 198 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 ZNRF4Q8WWF5 429 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 PSMG3-AS1Q96PY0 264 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 POLR2J3Q9H1A7 115 aaKnown RBP8.74□□□□□ -1.01
SYNE2-206ENST00000441438 NDUFB11Q9NX14 153 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 ZNF629Q9UEG4 869 aaPredicted RBP8.74□□□□□ -1.01
SYNE2-206ENST00000441438 SNX11Q9Y5W9 270 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 SPTBN5Q9NRC6 3674 aaKnown RBP8.74□□□□□ -1.01
SYNE2-206ENST00000441438 J3QR89 54 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 CXCL13O43927 109 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 CNTFRP26992 372 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 FOXI2Q6ZQN5 318 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 MOB1BQ7L9L4 216 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 ZNF503Q96F45 646 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 IGLV3-10A0A075B6K4 115 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 B4DEV8 164 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 STC2O76061 302 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 BCL3P20749 454 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 ZNF140P52738 457 aaPredicted RBP8.74□□□□□ -1.01
SYNE2-206ENST00000441438 ZNF429Q86V71 674 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 KRTCAP2Q8N6L1 136 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 RBMXL3Q8N7X1 1067 aaKnown RBP8.74□□□□□ -1.01
SYNE2-206ENST00000441438 TMEM133Q9H2Q1 129 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 EDA2RQ9HAV5 297 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 MMP26Q9NRE1 261 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 TAS2R5Q9NYW4 299 aa8.74□□□□□ -1.01
SYNE2-206ENST00000441438 ARRDC5A6NEK1 342 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 CLDN14O95500 239 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 TBX6O95947 436 aaPredicted RBP8.73□□□□□ -1.01
SYNE2-206ENST00000441438 RFPL3SP0C7P2 107 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 IGLC1P0CG04 106 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 GPR183P32249 361 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 S100A3P33764 101 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 BCDIN3DQ7Z5W3 292 aaKnown RBP8.73□□□□□ -1.01
SYNE2-206ENST00000441438 FRZBQ92765 325 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 TMEM54Q969K7 222 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 TSACCQ96A04 125 aaPredicted RBP8.73□□□□□ -1.01
SYNE2-206ENST00000441438 PDFQ9HBH1 243 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 SDK1Q7Z5N4 2213 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 CHD9Q3L8U1 2897 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 TNFSF13O75888 250 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 LAMP1P11279 417 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 CD99P14209 185 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 NFYBP25208 207 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 SLC38A11Q08AI6 406 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 LRRC10Q5BKY1 277 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 ZCCHC24Q8N2G6 241 aaKnown RBP8.73□□□□□ -1.01
SYNE2-206ENST00000441438 SMRP1Q8NCR6 262 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 OR4K17Q8NGC6 315 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 OR1L1Q8NH94 360 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms